GEISHA - A Chicken Embryo Gene Expression Database
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DROSHA
drosha ribonuclease III

Gene
Official SymbolDROSHA
Official Full Namedrosha ribonuclease III
CGNC ID9781
also known asRNASEN, ribonuclease 3|drosha, ribonuclease type III|ribonuclease III, nuclear|ribonuclease type III, nuclear
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001006379
PolypeptideNP_001006379
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.18715
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly35747FBgn0026722
Human29102ENSG00000113360MIM:608828
Mouse14000ENSMUSG00000022191All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3) MGI:1261425
Xenopus100135003, 733193494684
Zebrafish567505ENSDARG00000055563ZDB-GENE-070209-23ZFIN:ZDB-GENE-070209-23
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420911
Ensembl GeneENSGALG00000012916
KEGGgga:420911
GEISHA IdDROSHA.Carraco.2014Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
ACCAGTCTGGGTTCGCTGTACCCATTCTGAAAGCTATTATTCAAATGACCCCATGGATCAAGTGGGGGACTCTACTGTG
GTAGGCACAAGCAAGCTCCGAGATCTGTATGAGAAGTTTGAGGAGGAGCTAGGAAAACGACAGGCAAAGGCCAAAGCAG
CCAGGCCACCATGGGAGCCGCCGAAGACCAAGCTGGATGAAGATCTTGAGAGCTCCAGTGAGTCAGAATGCGACTCTGA
TGATGACAGCAGCTGCTCCAGCAGTTCAGATTCGGAAGTTTTTGATGTCATTGCAGAAATTAAGCGTAAGAAAGCACAC
CCTGATCGTCTTCATGAGGAACTGTGGTACAATGATCCAGGACAGATGAATGATGGACCGCTGTGCAAGTGCAGCGCTA
AAGCCCGACGAACAGGGATAAGACATGGCATTTATCCTGGTGAAGAGCCCATTAAACCATGTCGCCCCATGACCAACAA
TGCTGGAAGACTGTACCATTATCGAATTACAGTGTCACCTCCCACAAACTTCTTAACAGACAGACCTACTGTTATTGAG
TATGATGACCATGAATATATCTTCGAAGGATTCTCCATGTTTTCACATGCCCCACTGACAAACATTCCTCTATGTAAAG
TAATCAGATTTAACATTGACTATACAATTCATTTCATTGAAGAGATGATGCCTGAGAATTTTTGTGTGAAAGGTCTTGA
GCTGTTCTCTTCTTATCTATTCAAAGATATTCTGGAGCTGTATGACTGGCATCTTAAAGGTCCTTCAGTTGAAAATGAT
TCTGTTTCCTGCCCCAGATTTCACTTCATGCCGCGATTTGTGAGATTTCTTCCAGATGGAGGGAAGGAAGTACTGTCAA
TGCATCAGATTCTTCTCTACTTGTTACGATGCAATAAAGCTTTGGTGCCTGAAGAAGAGATTGCCAACATGCTTCAGTG
GGAAGAGCTGGAATGGCAGAAATATGCAGAGGAATGCAAAGGGATGATCGTTACCAGCCCTGGCATGAAACCCAGCTCA
GTTCGTATTGATCAACTGGACCGTGAACAATTCAATCCTGATGTAATTACTTTCCCCATTATTGTCCACTTTGGGATAC
GACCTGCTCAACTCAGCTACGCTGGAGATCCTCAATACCAAAAACTATGGAAGAGTTATGTGAAGCTGCGTCACCTGCT
AGCTAACAGTCCCAAAGTCAAACAAGCTGATAAACAGAAATTATCACAGAGAGAGGAAGCACTGCAGAAAATCCGGCAG
AAGAACACGATGAGACGTGAAGTGACTGTCGAGTTGAGTAGCCAGGGATTCTGGAAGACGGGGATACGCTCTGATGTCT
GCCAGCACGCAATGA
CitationCarraco G, Gonçalves AN, Serra C, Andrade RP. MicroRNA processing machinery in the developing chick embryo. Gene Expr Patterns. 2014 Nov;16(2):114-21. Epub 2014 Oct 1. DOI: 10.1016/j.gep.2014.09.002.
CopyrightCopyright © 2014 Elsevier B.V.
CommentsAuthors indicated the probe was amplified by PCR using the following primers: 5′-ACCAGTCTGGGTTCGCTGTACC-3′ and 5′-TCATTGCGTGCTGGCAGACA-3′. Above sequence was extracted from NCBI accession number NM_001006379.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
Epiblast
 
4-6
stage 4
stage 6
Epiblast
Headfold
Neural Plate/Tube
Primitive Streak
 
7-12
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 9
stage 11
Forebrain
Head Mesenchyme
Head Process
Hindbrain
Lateral Plate Mesoderm
Mesencephalon
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
HH9-
13-18
stage 13
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
Cranial Ganglia
Diencephalon
Ear/Otic Placode
Esophagus
Eye
Forebrain
Hindbrain
Lateral Plate Mesoderm
Limb Buds
Mesencephalon
Midbrain
Nephric Ducts
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Retina
Somites
Spinal Cord
Tail
Telencephalon
HH13-
19-23
stage 23
stage 23
stage 23
stage 23
stage 23
Eye
Limb Buds
Pharyngeal Arches and Clefts
Retina
Somites
Spinal Ganglia and Nerves
Tail
Telencephalon
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.18715

Mouse

EmageMGI:1261425
EurexpressMGI:1261425
MGI GXDMGI:1261425

Frog

Xenbase494684

Fruit Fly

BDGPFBgn0026722

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070209-23
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