GEISHA - A Chicken Embryo Gene Expression Database
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DSP
desmoplakin

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolDSP
Official Full Namedesmoplakin
CGNC ID9696
also known asdesmoplakin
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_001231410
PolypeptideXP_001231411
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.54571
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1832ENSG00000096696MIM:607450MIM:125647
Mouse109620ENSMUSG00000054889All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1) MGI:109611
Xenopus779453, 398354492194
Zebrafish327364, 322942, 324023ENSDARG00000022309ZDB-GENE-030131-5575, ZDB-GENE-030131-1662, ZDB-GENE-030131-2743ZFIN:ZDB-GENE-030131-5575, ZFIN:ZDB-GENE-030131-1662, ZFIN:ZDB-GENE-030131-2743
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420869
Ensembl GeneENSGALG00000012790
KEGGgga:420869

Entry 1

GEISHA IdDSP.Kimura.2011Data SourcePublication
Complete cDNA Template Probeshow
TGTCAGTGCAGGAGGCATACAGCAAAGGCCTCATAGATTTTGACACCTATACAGAACTAGCAGAACAGGAGTGTGAGTG
GGAAGAAATAACTATTACTGGATCGGATGGTAGCAGTAGAGTAGTCCTTGTCGACAGGAAAACAGGTAGCCAGTATGAT
ATACAGGATGCTATTGATAAAGGTCTGGTGGAGAAGAAATTCTTTGATCAGTACCGTTCTGGCAGTTTAAGCCTGACGC
AGTTTGCAGACATGATTTCCTGCCGTAACGGCACTGATGAGGTGTTTCGACATGAATCGGTGACTCGGTCTCCCACAGT
GCTGAGTGTCAGAAGTTCTTCCTCACTGATAAGGAGTGGTTCATTCTCAGAGACCCCAGAGGAGTGCAGTCCCATTGCA
GCCATATTTGATACTGAAAACTTGGAGAAAATCTCAATTTCAGAAGCTATACAGCGGGGCATTGTGGATAGCATCACCG
GACAACGGTTACTTGAAGCCCAGGCCTGCACAGGGGGCATAATATGCCCCACCACCGGCCAGAGGCTCTCCCTTCAGGA
AGCTACCAGTCAAGGCATCATTGACCAGGATATGGCCACGCGGCTCAAACCAGCCCAGAAGGCCTTCATAGGATTTGAA
GGCATAAAGAGCGGACGCAAAAGGATGTCAGCAGCAGAAGCAGTCAAGGAAAAATGGTTGCCTTATGAGGCTGGGCAGC
GGTTCCTTGAATTCCAGTACCTCACCGGTGGTCTCGTGGATCCAGAAGCACGTGGAAGAATAAGTATTGAAGAAGCCAT
TCGGAATTCATTGATTGATGGTCGTGCTGCCCAGAAATTGCAAGACACCAACAGCTATCCCAAAATACTGACCTGCCCC
AAGACCAAGCTGAAAATATCCTACAAAGATGCAATGAATCGGTCAATGGTGGAAGATATCACTGGTCTTAAACTCTTGG
AAGCAGCTTCTGTTTCATCTAAAGGTATATCCAGTCCCTACAATGTCTCCTCAGCACCTGGCTCTCGCTCCGGCTCTCG
CTCTGGCTCACGTTCAGGCTCACGCAGTGGGTCTAGGAGGGGAAGTTTTGATGCATCGGCAACTTCTTCATATTCTTAC
TCA
CitationKimura W, Alev C, Sheng G, Jakt M, Yasugi S, Fukuda K. Identification of region-specific genes in the early chicken endoderm. Gene Expr Patterns. 2011 Mar-Apr;11(3-4):171-80. Epub 2010 Nov 23.
CopyrightCopyright © 2010 Elsevier B.V. All rights reserved.
CommentsThe cDNA template used to generate the probe was obtained by PCR as described. F, 5′-TGTCAGTGCAGGAGGCATAC-3′, R, 5′-TGAGTAAGAATATGAAGAAG-3′.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 8
stage 11
stage 11
Ectoderm
Extraembryonic
Lateral Plate Mesoderm
Midgut
 
13-14
stage 14
stage 14
Ectoderm
Extraembryonic
Hindgut
Lateral Plate Mesoderm
Midgut
 

Entry 2

GEISHA IdDSP.Anderson.2020Data SourceDirect Submission
Complete cDNA Template Probeshow
AGCTGGTGAAATGGGGGTTTGATGCAGCATCTATTGAGCAACAGATTAGTGACCATAGAAGAACTCACAATGCCATTGG
AGACTATCGCTGGCACCTGGACAAAGTCAAAACAGATCTGCGTGAGAAGGCTGCCGTTCACCAGCTGGAGGAAGAATAC
GAAGGACTGCTGAAATACTCCTTTGAGAGAATGGATCAGCTCCGTCAATTCCAGAACCTTATCCAAGCAACCAGCAGAG
ATATCATGTGGATCAATGACTGTGAGGAGGAAGAGCTTCTCTACGACTGGAGTGACAGGAACACAGATATCTCCAGGAA
GCAGGAGGCCTTCTCTAAACGTATGAGTGAACTGGAGCTTAAAGAAAAAGAACTCAACAAGCTAAAGCAAGAAAGTGAC
CAGCTTGTGCTCAACCAGCACCCTGCTTCAGACAAAATTGAGGCCTACATGGATACACTACAAACTCAGTGGAGCTGGA
TTCTTCAGATCACAAAGTGCATTGATGTTCATTTGAAAGAGAATGCAGCTTACTTTCAGTTCTTTGAGGAGGCCCAAGC
TACAGAGAGCTATCTGAAGAATTTACAGGACTCCATCAGAAAGAAAGTTCATATGTGATAAGAGCATGTCACTTCAAGC
TTGCTGGAGCAGATCAAAGAGCTGGAAAATGAACAAGAGAAATTCTTGATACAAGAGGCAAGTGCAGAGTTTGGTGAAT
AAATCCAAAAGATTGTGCATTGAGCCCCTTACCCAGATTACCGGAATAACAAGCCATTATCTCAAGGCTTTTTGTGACT
ACAAAAGGATCTGAAAACATGCGGCAAGGAGATGAATGCATCCTGAAGACACCATGGCCCACCAGTGGTTGGGAGATGG
CCCTGAAGGATGGATATCTGGTGCCATTTGTAGTCTGATCGTCCCCCCCACAAA
CommentsImages and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST293i19.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage X
Unlabeled
 
1-3
stage 3
Hypoblast
Primitive Streak
 
4-6
stage 4
stage 4
stage 5
stage 6
Area Opaca
Early Mesoderm
Extraembryonic Mesoderm
Head Process
Hypoblast
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
stage 4+
7-12
stage 7
stage 8
stage 9
stage 10
stage 11
stage 12
Area Opaca
Ectoderm
Endoderm
Extraembryonic
Heart Tube
Lateral Plate Mesoderm
Midgut
Neural Plate/Tube
Notochord
Proepicardium
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm
stage 11+
stage 12+
ventral view
13-18
stage 13
stage 13
stage 13
stage 13
stage 14
stage 14
stage 14
stage 14
stage 14
Ectoderm
Endoderm
Extraembryonic
Extraembryonic Blood Vessels
Lateral Plate Mesoderm
Midgut
Neural Plate/Tube
Proepicardium
section 1
section 2
section 3
stage 14-
stage 14-, section 1
stage 14-, section 2
stage 14-, section 3
stage 14-, section 4
19-24
stage 21
stage 24
Allantois
Atria
Gut
Head Mesenchyme
Heart
Lung
Mesonephros
Outflow Tract
Pharyngeal Arches and Clefts
Ventricles
right
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.54571

Mouse

EmageMGI:109611
EurexpressMGI:109611
MGI GXDMGI:109611

Frog

Xenbase492194

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-5575, ZDB-GENE-030131-1662, ZDB-GENE-030131-2743
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