Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

ELF1
E74 like ETS transcription factor 1

Gene

Official Symbol	ELF1
Official Full Name	E74 like ETS transcription factor 1
CGNC ID	50862
also known as	ETS-related transcription factor Elf-1\|E74-like factor 1 (ets domain transcription factor), E74-like factor 1 , ets domain transcription factor, elf1
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_001006269
Polypeptide	NP_001006269

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	1997	ENSG00000120690		MIM:189973
Mouse	13709	ENSMUSG00000036461	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:107180
Xenopus	780315, 495059			492874
Zebrafish	30396	ENSDARG00000020759	ZDB-GENE-980526-335	ZFIN:ZDB-GENE-980526-335

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	418828
Ensembl Gene	ENSGALG00000016947
KEGG	gga:418828

Entry 1

GEISHA Id	ChEST596b9	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show GCGGCTCGAGCGGGGACGCGGCGCCGCAGGCCCCGCTGCGAGGCGGCCCGGGAGCGGCGTGAGGGGCGAGATAAACGGC TGTCCGCGTGGGAGAAACAGCTCAGGAAAGAACTCTCCTTGGTTTCTTTGAGAAGAGAAGGACCCAGGAACGCTGATGA TCTGAGAACTACTGAAACTGCCACTTGGTTCATTCTGTGATCCTGCCTTTCTGCCCTGCTGCACCTTGGTGACACTGTC CGTTCTTTTCCATTTGAGAACGCTTTTCTTCTTATGTGGAGCTGAGAGCTGGGAATGCGTTATTATGGCAGCAGTTGTA CAGCAGAATGAGCTTGTGTTTGAATTCGCCAGCAACGTCATGGAGGATGAGCAGCAGGTATGGGATGGTGGAAGAAATG GCATTTGTACGAGTTGGTGCAAGGAATGTTAGGAAAACGTGAGGAAAAGGTGTTGTGTAAAACACAAGAAAGCAAACAC TGAGATCATTATTGTTGCAGCAGACCTCTGCAGTTTCAAAAGCTTCCTGTTGCTTCCTGTAACTTGCACAAGCAGAGCA GAAATTGGTTGAAATGTTGTAACTTCTGCAGAATTGCAGAGACCTCCTCTGAAGATGTTTTTCCTTTGTCACTGATTTG TGCCAGTAGAATCCATTCGTGCTGTAAAATTCCTGGCATTCTGGTATTTGACGGTCGCTTNCAGTTTTGTGGTATGCTA GGATAAAATCCAAGAGAAAGCAACTGTCACACTACAGGTGACTGGAAGGAGCAGTAAGTGTTTGCTCTCTGCTCTTTGA AGATTGGTTTGCAAACTGCATTACTGTGTGTATATCAGCTATTCG
Comments	No specific expression detected stages 4-18.

no images

Entry 2

GEISHA Id	ELF1.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	TGAACAACCAAAGAAGAAAAAGGGG
Reverse cDNA Template Primer	AATTAACCCTCACTAAAGGGCTGCTGGAATCTCTGCTCGG	cDNA Template Length	1289
Forward cDNA Template Probe	show TTTTCCCGAGCCGAGCTAGATCTCTAATTTGTCACCGTCGTCTTCTTTTAGCACTCCTTGTACCCCAATCTGTTTAGCT TCTGTTGCTTTAATAACTGAAGTGATCACTGTGCCAGATGGATGAGCAACCACCTGTGAACTGCTGGGTGAAAAAGTTA CCACTGGGGTGGTGGCAGTGAAGGATGGAGACGAAGCCACGTTAGCTGTTCCATTGCATATTGTCTGCACGCTGCTGGT GAGAACCTGCTGAACTTGTGCTGGGCTCAGCACAATCGAGGAAGGAGGTGAGACTGGCTTCTGAGACTGTAGCATGACA TTTTCTTTAAGAACTGTCATGGGCTGTGAAGTAGGAATGGCTTGTAAAATAAATTTTTGGGGCGTTGCTGCTGAGGCTG GATCTGTGCTGGCTATCACTGTAGTAAGAGGCACCGTCTGGAGTGTTACAGTATGAAGCTGCTGATTTCCAGGAGAAAC AACCACTGGGACTTGGGTTGGAGTCTGTAAAGTCCTTATATTCTGAACTGAGGGATTTAATGTTTCATCTGGAACGTTA CTGGTTACAGCCGCGTGTCCTTCTGTGAGGGTATGCAATGGCTGCATTACGTGAACTGTCCGAAAAAGCTGAGTGGGAT GTACTGGCTGCGTAGACTGCATTGTCCTCAAAACTTCTGAAGTCAAGCCAGGTGTCTGCTGCTGTACAACTTCTACGTG CTCCTTAAGCTTAGCAGGCTTTGAATTTCCTGTTTTTAGAACTGTGGTGGATCCTCCCTTTGTTCCTGTGTTTGCAGAC GCTCTAGATCTGCTCGACTGGTTTCTACTGGCCACAGGAGTTGAGAGCAAACTTGAATCTGATGATTCAGTGCTAAGAC TTGCATCTTCATCATCTATATAGACGAGATCTTTTGGCATTTCCTTTAACTGATACACTAGGCGCTGACCTTCTACTTT AGCCAGTATTCCTCTTTGGTAATAATATCTGAAAGCTCCACCCATTGTTTCATAATTCAGTCAGGTTTGTTTTTGTGCT TTCCCCCAACCGGACCCGGCTTGGAATCTACAATTTGAAAATGCCCTTTCCCTTTGATCCCCTGAAATACTTAGACACT AACTTTTTCCGGACCATGCTAAAAAAACCCCAAAAAAATTGGGTTCCCTCCCCCCTGGTTTTCCTTTCCAAAATTTTTG GCGTTTTCCGGAACATCGACAAAAGGTTGCCCTCTCCCTTTTCCCTGGGGGACAAAA

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

1-3

stage 3

Unlabeled

4-6

stage 5

Area Pellucida

Low level expression observed.

7-12

stage 7

stage 8

stage 9

stage 11

stage 12

Anterior Intestinal Portal
Area Pellucida
Blood Islands
Blood Vessels
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
Widespread Expression

Stage 7+ to 8-.

13-18

stage 13

Anterior Intestinal Portal
Blood Islands
Blood Vessels
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesoderm
Neural Plate/Tube
Somites

19-24

stage 20

stage 22

Widespread Expression

stage 25

Widespread Expression

Entry 3

GEISHA Id	ELF1.Trevers.2023	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show GGGGCGGCGCCGCGGATGTCTGGATGATTATTTTCATAAATGTGATGGGACCTTTTCAGTTTTGTGTATATATAATTTG ATTCAGAAGCAAGACGTTACAAAGCTACCTAATTTCTGCATTTAATTGTTAGAATTCATGCTTTAGAACAGATTTTGAT TTTCTGTTAATTGCTAAATGTTATCATAAAATTGCATATTACTAATGTTTCAAAGTACAGGCATGAAGAAACGTGCTTT TTATGTTATGAAGACGTTATTTTGAGGTTGTTTGCCAAAGCTCCAAACTTCTTTCTTACTGTATGTTTTCAGTCTGTTG CTGATTTACATTGCAATAAGATTATTATAACCTTTTTCTGTTTAATCTGTACATGTATCACTTAGCTTTTGAAGCAACA GTTACTTTTCATTGGACGTTTTCATTCCATGCGTATGAATGTTGCTGGATATCTTTCATACCGGAGAATTACATCAATT TTACACACCGATAACCAGATATCCTCTTGCATTTTTTCTTGCAGCACAAGCTCTTGTGTGTGCAGAACGGAATATACAC TCCTATTGAGAGTACACAAAACATTTATTCCAGTCAATGGACAATGCCCTGTCAATATTTCATAAGAAAACATCAGATA GATATACTTTAATTACAGAAGCTAACAGCATCACTACAGGTGCAAAAGTTTCATGCCATTTGTGACTATGAAGCCTTAA CAATCTTGCTTTCTACTTCAGATTATCCGTAGGCGGGCAGGGACAA
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.