GEISHA - A Chicken Embryo Gene Expression Database
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EN1
engrailed homeobox 1

Gene
Official SymbolEN1
Official Full Nameengrailed homeobox 1
CGNC ID9192
also known asEn-1, Gg-En-1, en-3, homeobox protein engrailed-1|Engrailed-3|engrailed protein|homeobox protein en-1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_001234328
PolypeptideXP_001234329
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish100334734
Gene Ontology
Molecular Functionsequence-specific DNA binding, sequence-specific DNA binding transcription factor activity
Biological Processmulticellular organismal development
Cellular Componentnucleus
Links to other databases
Entrez Gene771008
Ensembl Gene
KEGGgga:771008

Entry 1

GEISHA IdEn-1.Prin.2004Data SourcePublication
Complete cDNA Template Probeshow
AGATCTGGTTCCAGAACAAGCGGGCCAAGATCAAGAAGGCGACGGGCATCAAGAACGGGCTGGCGCTGCACCTCATGGC
CCAGGGACTGTACAACCACTCCACCACCACGGTGCAGGACAAAGAGGAGAGCGAGTGACGGCCCCGCGCCGACAGGTGC
CACGAACACAGAGCTATTGTCTATCCATAGTATAAGGACTGCGAACGAGAGGAAAAAAAAAAAAAATATGAACGCTTAC
AAAAAAAAAAAAAAAAAAAAAATCTCTATATAGCCAAACATATGACCCTGTATATATTTAATTTCAGGTAAGAAATATG
TGTAGCGATCTCTATTTGCTGGACGGTTTCTCTCTCCCCTTCTCTCCCCCTCTCTCTTTTGTTCGTTTGTTGCTTTCCT
TTCCTCCCCACGTCCGTCGCTCTTCGTTTTCGGTGTCCGCCTCCGCTCTTCCGTTCGATCCTTATTTGTGTGTGTGTGT
GAATTTCTGTCTCCCCCCCCCCCCCTCTCTCTCTTTATTTTTATTTTAATTTTTTTTTTCCCGAGGAAAAAAAGACAAA
AAAAAATAATAATAATAATAAATCTGATCCACAGACTGCGAGGCTGAACGGCCGCTCCAAGCCAAAGATTTTATTATGT
TCAGAAATCTGTAGTCTGAAATAAAGTGTAGGCTGTGCTCAGCACGCGGCTGCCGCGGCTCCTTCTTTCGGCGCGTGTG
TGTGTGTGGCACGGACACATCTGTGCACGCACAGCGCTGCTGCGATCCCTTTTGCTTTTTGGTGGATCAGCGCAGTGAA
TTTTTGAAGCGACTCTCCTCTGTTTGTTTTAAAGCACTCCGAGCTC
CitationPrin F, Logan C, D'Souza D, Ensini M, Dhouailly D. Dorsal versus ventral scales and the dorsoventral patterning of chick foot epidermis. Dev Dyn. 2004 Mar;229(3):564-78.
CopyrightWiley-Liss, Inc. 2004
CommentsEn-1, a previously isolated 800 bp BglII–SstI chick genomic DNA fragment extending 3′ from the homeobox
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 21
Limb Buds
ventral ectoderm (ve) of the hindlimb
25-30
stage 30
Unlabeled Embryonic
 
31-40
stage 37
stage 37
stage 39
stage 40
stage 40
Leg Ectoderm
Surface Ectoderm
 

Entry 2

GEISHA IdEN-1.Tomas.2011Data SourcePublication
Complete cDNA Template Probeshow
CGGCGGCAACTCGGCGGCAAGTCGGGGAGCACGGCAGCCCCGCCATCCTCCTCATGGGCTCCAATAATGGAGGAGCCGT
GCTCAAGCCCGACTCGCAGCAGCCGCTGGTGTGGCCCGCCTGGGTGTACTGCACGCGGTACTCCGACCGGCCGTCCTCG
GGCCCCCGCACCAGGAAGCTGAAGAAGAAGAAGACGGAGAAGGAGGACAAACGGCCGCGCACCGCCTTCACGGCCGAGC
AGCTGCAGCGGCTGAAGGCGGAGTTCCAGGCGAACCGCTACATCACGGAGCAGCGGCGGCAGAGCCTGGCCCAGGAGCT
GAGCCTCAACGAGTCCCAGATCAAGATCTGGTTCCAGAACAAGCGGGCCAAGATCAAGAAGGCGACGGGCATCAAGAAC
GGGCTGGCGCTGCACCTCATGGCCCAGGGACTGTACAACCACTCCACCACCACGGTGCAGGACAAAGAGGAGAGCGAGT
GACGGCCCCGCGCCGACAGGTGCCACGAACACAGAGCTATTGTCTATCCATAGTATAAGGACTGCGAACGAGAGGAAAA
CAAACAACACAATTTTGACCGCTTACAAAAAAACAAACAACAAAAAAACCTCCTTTTTTTCCCAAATTTTTCCCCCTTG
TTTTTTTTTCACTTTCCGGGTTAAAAAATTTTTTTTCCCACCCCTCAATGCCCGGACGGTTCTTCTTCTCCCTTTTTTT
CC
CitationTomás AR, Certal AC, Rodríguez-León J. FLRT3 as a key player on chick limb development. Dev Biol. 2011 Jul 15;355(2):324-33.
CommentsProbe for en-1 was obtained from chicken EST ChEST92p12.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-14
stage 14
stage 14
Wing Mesenchyme
control embryo

Entry 3

GEISHA IdEN1.Davey.2006Data SourcePublication
Complete cDNA Template Probeshow
ATGGGTCGTCTCCCACCCCCGGGGCACGGAGCCCCTAAGGCAGCACCCGGGGCACGGAGGCGGCGGGGAGCATCTTCCG
ATGACGGCGCGACTCGGGCAAACTTCCCACGCCGGTGGCAGGGAGCCCCGCGCAGCCCCGCGGGTCGCGGTCCCGCGTG
CGCCCCTACGGTGGGAGAAGAGCCCGGGGCCGCTCCCAGCCTCGAGGTGCCCCCGCCCGCGGGGCCCCGTCCCGGAGAG
CGGCGGGGAGGGCGGAGGCCGGGAGGCGGCAGGCGTCGGCCCTTTGCGAAAGTATCCCCGCAGCCTTCCTTCCCCCCGA
GCGGACGCAAGAGCGGAGAGCCGGGGAGGGAGAGAGCGGGAGGACGCGTAAAACGCGGTGGAAGACGGCCGCGGGTGCG
AGGCTGTCGCTGGGGAAGGACTCCGGCGGCCAAGTACGGGGAGCACGGCAGCCCCGCCATCCTCCTCATGGGCTCCAAT
AATGGAGGAGCCGTGCTCAAGCCCGACTCGCAGCAGCCGCTGGTGTGGCCCGCCTGGGTGTACTGCACGCGGTACTCCG
ACCGGCCGTCCTCGGGCCCCCGCACCAGGAAGCTGAAGAAGAAGAAGACGGAGAAGGAGGACAAACGGCCGCGCACCGC
CTTCACGGCCGAGCAGCTGCAGCGGCTGAAGGCGGAGTTCCAGGCGAACCGCTACATCACGGAGCAGCGGCGGCAGAGC
CTGGCCCAGGAGCTGAGCCTCAACGAGTCCCAGATCAAGATCTGGTTCCAGAACAAGCGGGCCAAGATCAAGAAGGCGA
CGGGCATCAAGAACGGGCTGGCGCTGCACCTCATGGCCCAGGGACTGTACAACCACTCCACCACCACGGTGCAGGACAA
AGAGGAGAGCGAGTGA
CitationDavey MG, Paton IR, Yin Y, Schmidt M, Bangs FK, Morrice DR, Smith TG, Buxton P, Stamataki D, Tanaka M, Münsterberg AE, Briscoe J, Tickle C, Burt DW. The chicken talpid3 gene encodesa novel protein essentialfor Hedgehog signaling. Genes Dev. 2006 May 15; 20(10): 1365–1377.
CopyrightCopyright © 2006, Cold Spring Harbor Laboratory Press
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #XM_001234328.2 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-20
stage 20
stage 20
Spinal Cord
 

Entry 4

GEISHA IdEN1.Altabef.2002Data SourcePublication
Complete cDNA Template Probeshow
ATGGGTCGTCTCCCACCCCCGGGGCACGGAGCCCCTAAGGCAGCACCCGGGGCACGGAGGCGGCGGGGAGCATCTTCCG
ATGACGGCGCGACTCGGGCAAACTTCCCACGCCGGTGGCAGGGAGCCCCGCGCAGCCCCGCGGGTCGCGGTCCCGCGTG
CGCCCCTACGGTGGGAGAAGAGCCCGGGGCCGCTCCCAGCCTCGAGGTGCCCCCGCCCGCGGGGCCCCGTCCCGGAGAG
CGGCGGGGAGGGCGGAGGCCGGGAGGCGGCAGGCGTCGGCCCTTTGCGAAAGTATCCCCGCAGCCTTCCTTCCCCCCGA
GCGGACGCAAGAGCGGAGAGCCGGGGAGGGAGAGAGCGGGAGGACGCGTAAAACGCGGTGGAAGACGGCCGCGGGTGCG
AGGCTGTCGCTGGGGAAGGACTCCGGCGGCCAAGTACGGGGAGCACGGCAGCCCCGCCATCCTCCTCATGGGCTCCAAT
AATGGAGGAGCCGTGCTCAAGCCCGACTCGCAGCAGCCGCTGGTGTGGCCCGCCTGGGTGTACTGCACGCGGTACTCCG
ACCGGCCGTCCTCGGGCCCCCGCACCAGGAAGCTGAAGAAGAAGAAGACGGAGAAGGAGGACAAACGGCCGCGCACCGC
CTTCACGGCCGAGCAGCTGCAGCGGCTGAAGGCGGAGTTCCAGGCGAACCGCTACATCACGGAGCAGCGGCGGCAGAGC
CTGGCCCAGGAGCTGAGCCTCAACGAGTCCCAGATCAAGATCTGGTTCCAGAACAAGCGGGCCAAGATCAAGAAGGCGA
CGGGCATCAAGAACGGGCTGGCGCTGCACCTCATGGCCCAGGGACTGTACAACCACTCCACCACCACGGTGCAGGACAA
AGAGGAGAGCGAGTGA
CitationAltabef M, Tickle C. Initiation of dorso-ventral axis during chick limb development. Mech Dev. 2002 Aug;116(1-2):19-27.
CopyrightCopyright © 2012 Elsevier B.V. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #XM_001234328.2).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
stage 17
stage 17
stage 17
Limb Buds
 
25-26
stage 26
Limb Buds
Stage 26/27 embryo

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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