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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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EVX1
even-skipped homeobox 1

Gene

Official Symbol	EVX1
Official Full Name	even-skipped homeobox 1
CGNC ID	8411
also known as	homeobox even-skipped homolog protein 1
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_425994
Polypeptide	XP_425994
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	2128	ENSG00000106038		MIM:142996
Mouse	14028	ENSMUSG00000005503	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:95461
Xenopus	100496893, 399437			483663
Zebrafish	30499, 30335	ENSDARG00000005628, ENSDARG00000056012	ZDB-GENE-980526-364, ZDB-GENE-980526-69	ZFIN:ZDB-GENE-980526-364, ZFIN:ZDB-GENE-980526-69

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	428434
Ensembl Gene
KEGG	gga:428434

Entry 1

GEISHA Id	EVX1.Agarwala.2005	Data Source	Publication
Complete cDNA Template Probe	show ATGGAAAGCAGGAAGGAGATGGTGATGTTTCTGGAAGGGACGCAACTCGGCGCTCTGGTTGGCAAGAGGGTGCCTAATT TGACCGAAACGGTGAGGAGCCCCGCTCCGGAGCCGCAGGAGAAGATGATCCCTCGGAACTGCCTCAGCCCCAGACCTGG CCCCTTGTCGTCCCGGGAGAGAGGAGGAGGAGGAGGAGGTGGCGGAGGAGAAGACGAAGAGGAGGTGGAGGTGCTGCCG GGGACAGGGACGGTGCCGGAGAGCCGCTCGGCGGCGGCGGCGCTGCTCGGGGCCGGACAGCAGCCCCCCGGCACGGAGC CCCCCTCCAGCAAAGGGCAGCAGAGCAGCTCGGACACCGAGTCGGATTTCTATGAGGAAATCGAGGTGAGCTGCACCCC GGACTGCGCCACGGGGAGCGCCGAGTACCAGCACAGCAAAGGGCCGTGCCCCGAGGCTCGAGCCGGCAGCCCCGGCGGC GGCGGGGATCACCCCAAGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTCCCAGGGCCCGCTGAGCTGCAGCGCCA GCGATCAGATGCGCCGGTACCGCACCGCCTTCACCCGCGAGCAGATCGCCCGGTTGGAGAAGGAGTTTTACCGGGAGAA CTACGTGTCCAGGCCCCGGAGATGTGAACTGGCTGCTGCTCTAAATCTGCCAGAAACCACCATCAAGGTGTGGTTCCAG AACCGGCGGATGAAGGACAAGCGGCAGCGCCTGGCCATGACCTGGCCGCACCCGGCGGACCCGGCGTTCTACACCTACA TGATGAGCCACGCGGCCGCCACCGGCAACCTTCCCTACCCCTTCCCATCCCACCTGCCCCTGCCCTACTACTCCCACAT GGGCATCGGGGCCACCTCGGCCTCGGCCGCCGCTCCCTTCAGCACCCCGCTGCGGCCGCTGGACACCTTCCGCGTCCTG TCCCACCCGTACCCGCGGCCGGAGCTGCTCTGCGCCTTCAGGCACCCCTCTCTGTACCCCGCCCCGAGCCACGGACTCG GCAGCGCCGGTGGCAGCCCCTGCTCGTGCCTGGCGTGCCACGGCAGCCCGTCCAACGGGCTGGCACAGAGACCCGCCGG GTCAGACTTTACCTGCTCGGCCACCACCAGGACGGACTCCTTCCTCACTTTCACCCCCTCGGTGCTGAGCAAAGCCACC TCGGTTTCCATTGACCAGCGGGAAGAAGTACCTTTAACGAGATAAAGCTTCGTCTCAGGGTTGTTAAGAAATTCGCCCC TTTCTCGGGAGCTCTTTGAGTTAATGTACGTACGGCCGATGTTTATTTAATCGTGTTCTCTCCCCAGAAGTGGACACCT ATGGAAAAAAAAAATAATAAAAAAAAAGAGAAAAAAAGGAAAAAAAGACTAAAAATAACTCAGTCTTGAAAGGATTTAC ATTCCAAGGGGGGAAAAAAAAAGAGCAGGAACGAGCGGTGATTTATCTCGGAGAAGGGTTTTAGGCACGGAGGAGAAAC AAAATCTACCTGAATGAAACACATTTCAGTAACGCACTGAGGTGAGCGGGGACTTTCTTGTCAATTGACGGACTTCCTA CCGGGGCCAGAACTTCTGCGGCTTACAGCAACCGACCCTATGCACACACCTATGGGACTGAGAGGGCAAATCTGAAATA CTTGAAAGAAACGTTATCACGCTAACGAAATGGCTGGTGAGCATGAAGAAAGCAAAGCTGCGATCTACCGGGGCGTTCA GAAAATATAACCAACGATCAAACAGCAAAACCAAAAGGTTTCGGGATTGCGACTCGATAGTATTATCCAGTAATTTCTA GAGAGAAAAACAATGCTTTACCATAAAGAGAAAACCTGACGTTCTG
Citation	Agarwala S, Aglyamova GV, Marma AK, Fallon JF, Ragsdale CW. Differential susceptibility of midbrain and spinal cord patterning to floor plate defects in the talpid2 mutant. Dev Biol. 2005 Dec 1;288(1):206-20. Epub 2005 Oct 21.
Copyright	Copyright © 2005 Elsevier Inc. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_425994).

Stage

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Location (click to highlight)

Comments (click to highlight)

19-24

stage 22

Spinal Cord

VO interneurons

25-28

stage 26

stage 28

Midbrain

EVX1+ arcuate stripes occupy the lateral positions in the ventral midbrain.

Entry 2

GEISHA Id	EVX.Sanders.2002	Data Source	Publication
Complete cDNA Template Probe	show ATGGAAAGCAGGAAGGAGATGGTGATGTTTCTGGAAGGGACGCAACTCGGCGCTCTGGTTGGCAAGAGGGTGCCTAATT TGACCGAAACGGTGAGGAGCCCCGCTCCGGAGCCGCAGGAGAAGATGATCCCTCGGAACTGCCTCAGCCCCAGACCTGG CCCCTTGTCGTCCCGGGAGAGAGGAGGAGGAGGAGGAGGTGGCGGAGGAGAAGACGAAGAGGAGGTGGAGGTGCTGCCG GGGACAGGGACGGTGCCGGAGAGCCGCTCGGCGGCGGCGGCGCTGCTCGGGGCCGGACAGCAGCCCCCCGGCACGGAGC CCCCCTCCAGCAAAGGGCAGCAGAGCAGCTCGGACACCGAGTCGGATTTCTATGAGGAAATCGAGGTGAGCTGCACCCC GGACTGCGCCACGGGGAGCGCCGAGTACCAGCACAGCAAAGGGCCGTGCCCCGAGGCTCGAGCCGGCAGCCCCGGCGGC GGCGGGGATCACCCCAAGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTCCCAGGGCCCGCTGAGCTGCAGCGCCA GCGATCAGATGCGCCGGTACCGCACCGCCTTCACCCGCGAGCAGATCGCCCGGTTGGAGAAGGAGTTTTACCGGGAGAA CTACGTGTCCAGGCCCCGGAGATGTGAACTGGCTGCTGCTCTAAATCTGCCAGAAACCACCATCAAGGTGTGGTTCCAG AACCGGCGGATGAAGGACAAGCGGCAGCGCCTGGCCATGACCTGGCCGCACCCGGCGGACCCGGCGTTCTACACCTACA TGATGAGCCACGCGGCCGCCACCGGCAACCTTCCCTACCCCTTCCCATCCCACCTGCCCCTGCCCTACTACTCCCACAT GGGCATCGGGGCCACCTCGGCCTCGGCCGCCGCTCCCTTCAGCACCCCGCTGCGGCCGCTGGACACCTTCCGCGTCCTG TCCCACCCGTACCCGCGGCCGGAGCTGCTCTGCGCCTTCAGGCACCCCTCTCTGTACCCCGCCCCGAGCCACGGACTCG GCAGCGCCGGTGGCAGCCCCTGCTCGTGCCTGGCGTGCCACGGCAGCCCGTCCAACGGGCTGGCACAGAGACCCGCCGG GTCAGACTTTACCTGCTCGGCCACCACCAGGACGGACTCCTTCCTCACTTTCACCCCCTCGGTGCTGAGCAAAGCCACC TCGGTTTCCATTGACCAGCGGGAAGAAGTACCTTTAACGAGATAAAGCTTCGTCTCAGGGTTGTTAAGAAATTCGCCCC TTTCTCGGGAGCTCTTTGAGTTAATGTACGTACGGCCGATGTTTATTTAATCGTGTTCTCTCCCCAGAAGTGGACACCT ATGGAAAAAAAAAATAATAAAAAAAAAGAGAAAAAAAGGAAAAAAAGACTAAAAATAACTCAGTCTTGAAAGGATTTAC ATTCCAAGGGGGGAAAAAAAAAGAGCAGGAACGAGCGGTGATTTATCTCGGAGAAGGGTTTTAGGCACGGAGGAGAAAC AAAATCTACCTGAATGAAACACATTTCAGTAACGCACTGAGGTGAGCGGGGACTTTCTTGTCAATTGACGGACTTCCTA CCGGGGCCAGAACTTCTGCGGCTTACAGCAACCGACCCTATGCACACACCTATGGGACTGAGAGGGCAAATCTGAAATA CTTGAAAGAAACGTTATCACGCTAACGAAATGGCTGGTGAGCATGAAGAAAGCAAAGCTGCGATCTACCGGGGCGTTCA GAAAATATAACCAACGATCAAACAGCAAAACCAAAAGGTTTCGGGATTGCGACTCGATAGTATTATCCAGTAATTTCTA GAGAGAAAAACAATGCTTTACCATAAAGAGAAAACCTGACGTTCTG
Citation	Sanders TA, Lumsden A, Ragsdale CW. Arcuate plan of chick midbrain development. J Neurosci. 2002 Dec 15;22(24):10742-50.
Copyright	Copyright © 2002-2011 by the Society for Neuroscience
Comments	An insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (XM_425994 ).