GEISHA - A Chicken Embryo Gene Expression Database
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EXFABP
extracellular fatty acid-binding protein

Gene
Official SymbolEXFABP
Official Full Nameextracellular fatty acid-binding protein
CGNC ID49786
also known asEX-FABP, LCN15, LCN8, P20K, extracellular fatty acid-binding protein|lipocalin 15|lipocalin 8|quiescence-specific protein
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205422
PolypeptideNP_990753
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.739
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Functionarachidonic acid binding, fatty acid transporter activity, linoleic acid binding, oleic acid binding, more...stearic acid binding
Biological Processacute-phase response, cellular lipid metabolic process, defense response to bacterium, more...embryo development ending in birth or egg hatching, fatty acid homeostasis, fatty acid transport, heart development, inflammatory response, innate immune response, muscle fiber development, negative regulation of apoptotic process, positive regulation of cell proliferation, positive regulation of chondrocyte differentiation, positive regulation of myoblast differentiation, positive regulation of myotube differentiation, response to cytokine, response to drug, response to linoleic acid, response to lipopolysaccharide, response to toxic substance
Cellular Componentextracellular space
Links to other databases
Entrez Gene396393
Ensembl GeneENSGALG00000024011
KEGGgga:396393

Entry 1

GEISHA IdEXFABP.Anderson.2020Data SourceDirect Submission
Complete cDNA Template Probeshow
CGCCTGANGCTGCACGAGATGAGGACGCTGGCACTGAGCCTGGCGCTGGCCCTGCTCTGCTTGCTGCACACAGAGGCTG
CGGCCACAGTGCCGGACAGGAGCGAGGTTGCAGGGAAATGGTATATTGTTGCTCTGGCCTCCAACACCGACTTCTTCCT
GCGTGAGAAGGGCAAGATGAAGATGGTAATGGCCAGAATCTCTTTCCTAGGAGAGGATGAGCTGGAGGTCTCCTATGCT
GCCCCCAGCCCAAAGGGGTGCAGAAAATGGGAGACAACCTTCAAGAAGACCAGTGATGATGGTGAAGTCTACTACTCAG
AGGAAGCCGAGAAAACGGTGGAGGTGCTGGACACGGACTACAAGAGCTATGCAGTAATCTTTGCAACCAGGGTGAAGGA
TGGGAGGACCTTGCACATGATGAGGCTCTACAGCAGAAGCCGTGAGGTGAGCCCCACAGCCATGGCAATCTTCAGGAAG
CTTGCTAGGGAGCGGAACTACACGGATGAGATGGTCGCCGTGCTGCCCAGCCAGGAGGAATGCAGCGTTGATGAAGTGT
AGGATGGCTGATGAATGCTGCTTCCCAAACAAAGCAAGACTAATGTGCCAAAGCTCGAGGCTGCTGCTCTACCACCCCT
ATCATGGCTATGAGGCATCTCCCGCTTCACCAGCACACGGCTCCTCCTTTTTGCCCAAATAAACAGTAACTTTCCCAA
CommentsImages and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST242g23.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 11
stage 12
stage 12
Extraembryonic
Forebrain
Foregut
Head Mesenchyme
Heart
Heart Tube
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Somites
Widespread Expression
stage 12-

Entry 2

GEISHA IdEXFABP.Anderson.2019Data SourcePublication
Complete cDNA Template Probeshow
CCGGTGGCGGCGCGGGCTATTACGCCTGAGGCTGCACGAGATGAGGACGCTGGCACTGAGCCTGGCGCTGGCCCTGCTC
TGCTTGCTGCACACAGAGGCTGCGGCCACAGTGCCGGACAGGAGCGAGGTTGCAGGGAAATGGTATATTGTTGCTCTGG
CCTCCAACACCGACTTCTTCCTGCGTGAGAAGGGCAAGATGAAGATGGTAATGGCCAGAATCTCTTTCCTAGGAGAGGA
TGAGCTGGAGGTCTCCTATGCTGCCCCCAGCCCAAAGGGGTGCAGAAAATGGGAGACAACCTTCAAGAAGACCAGTGAT
GATGGTGAAGTCTACTACTCAGAGGAAGCCGAGAAAACGGTGGAGGTGCTGGACACGGACTACAAGAGCTATGCAGTAA
TCTTTGCAACCAGGGTGAAGGATGGGAGGACCTTGCACATGATGAGGCTCTACAGCAGAAGCCGTGAGGTGAGCCCCAC
AGCCATGGCAATCTTCAGGAAGCTTGCTAGGGAGCGGAACTACACGGATGAGATGGTCGCCGTGCTGCCCAGCCAGGAG
GAATGCAGCGTTGATGAAGTGTAGGATGGCTGATGAATGCTGCTTCCCAAACAAAGCAAGACTAATGTGCCAAAGCTCG
AGGCTGCTGCTCTACCACCCCTATCATGGCTATGAGGCATCTCCCGCTTCACCAGCACACGGNTCCTCCTTTTTGCCCA
AATAAACAGTAACTTTCCCAAAAA
CitationAnderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
CopyrightCopyright © 2019 Elsevier Inc. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Heart
Ventricles
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.739

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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