GEISHA - A Chicken Embryo Gene Expression Database
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MECOM
MDS1 and EVI1 complex locus

Gene
Official SymbolMECOM
Official Full NameMDS1 and EVI1 complex locus
CGNC ID7174
also known asEVI1, MDS1 and EVI1 complex locus protein EVI1|MDS1 and EVI1 complex locus protein|ecotropic viral integration site 1, Ecotropic virus integration 1 site protein.
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_422804
PolypeptideXP_422804
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human2122ENSG00000085276MIM:165215MIM:165215
Mouse14013ENSMUSG00000027684All phenotypic alleles (4):Chemically induced(1) Targeted, knock-out(2) Targeted, other(1) MGI:95457
Xenopus734157, 100301954980194
Zebrafish497407ENSDARG00000060808ZDB-GENE-050208-123ZFIN:ZDB-GENE-050208-123
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424997
Ensembl Gene
KEGGgga:424997

Entry 1

GEISHA IdMECOM.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-TCAGTGCCTTGAAGCCAGAG-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGCAGGGGAAGCTTTGCAGTTC-3’cDNA Template Length753
Complete cDNA Template Probeshow
TCAGTGCCTTGAAGCCAGAGGCCAATGAGATGATCCAGTCAATGCCATCCATGTTCAACTTCCGAGCCCCACCAAGTGC
TCTGCCTGAGACCCTCCTGCGCAAGGGCAAGGAGCGCTACACCTGCAGATACTGTGGCAAGATATTCCCCAGATCTGCA
AACCTAACCCGTCACCTGAGGACGCACACTGGAGAGCAGCCCTACAGATGCAAATACTGTGACAGGTCCTTTAGCATAT
CTTCCAACCTGCAGAGACATGTCCGTAATATCCACAATAAAGAGAAGCCATTCAAGTGTCACTTGTGTGACAGGTGTTT
TGGTCAACAAACCAATCTTGACAGACATCTAAAAAAGCATGAGAATGGCAACATGTCTGGTACTGCAACATCTTCACCT
CACTCAGAACTGGAAAGCACAGGGGCCATCCTAGATGACAAGGAAGATTCTTACTTCACAGAAATTAGGAATTTTATTG
GAAACAGCAACCACAACAATCAATCCCCCCGAAACTCAGAGGAGAGAATGAATGGCAGCCACTTTAAGGATGAAAAAGC
CATGGTAACCAGCCAGAACTCAGATTTGTTGGATGACGAAGAGGCAGAAGATGAAGTAATGATGGATGAAGAAGACGAA
GAGAGTGAAATCGCAGGGAAAACAGTCAAAGAGCCTGTTACAAGTGACATACACGAGGGGACTCCTGAGGAGGATTACG
AGGAAACGAGTACTTTGGACATGAACTGCAAAGCTTCCCCTG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 11
Aorta
Forebrain
Unlabeled
 
13-18
stage 16
Aorta
Eye
Foregut
Head Mesenchyme
Hindbrain
Outflow Tract
Pharyngeal Arches and Clefts
Pronephros
Sclerotome
 
19-24
stage 19
stage 19
stage 19
stage 19
stage 20
stage 23
stage 23
stage 23
stage 23
stage 23
Anterior/Second Heart Field
Aorta
Blood Vessels
Eye
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Lung
Midbrain
Nephric Ducts
Neural Plate/Tube
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Splanchnic Mesoderm
Valves
Ventricles
Wing Mesenchyme
 
25-26
stage 26
stage 26
stage 26
stage 26
stage 26
Cranial Ganglia
Ear/Otic Placode
Head Mesenchyme
Leg Mesenchyme
Mesonephros
Myotome
Oral Pharynx
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme
 

Entry 2

GEISHA IdEVI1.Kee.2007Data SourcePublication
Complete cDNA Template Probeshow
AAAAGCCCCCCCCGCCCCCCACGCCGGCATCGGCCGCGGGACTGGCAGCATGCGATCCAAAGGCAGGGCGAGGAAGCTG
GCCGCAAGTGATGAATGCCTTTATGAAAGCTTTCCTGAGCTTCCCTTGGAGGATGTGCCAGAAGCTGATGGAGAGGCTG
CAAACGCCCAGTGCCCAGCATCTGTCAGCATCCAGGAGCCATCCTCTCCAACCACCTCCAGCGAAGCTTTCACACCAAA
GGAGAGCTCTCCTTACAAGGCTACGATATACATTCCCGATGACATTCCCATTCCTTCTGAATTTGAGCTCCGAGAATCC
AACATTCCTGGAGCGGGATTAGGAATATGGACCAAAAGGAAGATTGAAGTAGGAGAAAAGTTCGGCCCTTTTGTAGGAG
AGCAACGGCCACACCTCAAAGATCCCAGTTACGGTTGGGAGATCTTGGATGAGTTTTGCAATGTGAAGTTCTGCATAGA
CGCCAGCCAACCAGATGTAGGAAACTGGCTCAAATACATCAAGTTTGCTGGATGCTACGATCAGCACAACCTTGTTGCA
TGTCAGATAAGTGATCAGATATTCTACAGAGTAGTGGCGGACATTGAGCCAGGAGAGGAGCTATTACTGTTCATGAAGA
GTGAAGATTATTCACATGAAACAATGGCTCCGGACATTCACGAGGAGCGCCAGTATCGCTGCGAGGACTGCGACCAGCT
CTTTGAGTCCAAGGCTGAGCTGGTGGACCACCAGAAGTTCCCCTGCAGCACACCACACTCCGCCTTCTCCATGGTGGAG
GAGGACTTCCAGAAAAAGCTTGAGAATGAGAATGACCTTCGGGATGTGCATGAAATCCAGGAGTGTAAAGAGTGTGATC
AAGTCTTCCCAGACTTACAAAGCCTGGAGAAGCACATGCTGTCCCACAGCGAGGAGCGGGAGTACAAGTGCGACCAGTG
CCCCAAAGCTTTCAACTGGAAGTCCAACTTGATACGGCACCAAATGTCGCATGACAGCGGCAAGCACTACGAGTGTGAG
AACTGTGCCAAGGTTTTCACGGACCCCAGCAACCTCCAGAGGCACATTCGTTCCCAGCATGTTGGGGCTCGTGCTCACG
CTTGTCCAGAGTGTGGCAAAACCTTTGCCACATCTTCAGGCCTCAAACAGCATAAACACATCCACAGCAGTGTCAAACC
CTTTATATGTGAGGTCTGCCATAAATCCTATACTCAGTTTTCAAACCTTTGTCGTCATAAGCGCATGCATGCTGATTGC
AGAACCCAAATCAAGTGCAAAGACTGTGGACAAATGTTCAGCACTACGTCTTCCTTAAATAAACACAGGAGATTTTGTG
AGGGCAAGAACCATTTTGCAGCAGGAGGATTTTTTGGCCAAGGCATTTCACTTCCTGGAACCCCAGCTATGGATAAAAC
GTCCATGGTTAATATGAATCATGCAAATCCGGGCCTTGCTGACTATTTTGGAGCCAATAGGCATCCTGCTGGTCTTACC
TTTCCAACAGCTCCTGGATTTTCTTTTAGCTTCCCCGGTCTGTTTCCTTCAGGCTTGTACCACAGGCCACCTTTGCTAC
CTACTAGCTCTCCTGTTAAAGGACTACCAAGCGCAGATCAGACAAACAAAAGTCAAAGTCCCCTCATGACCAACCCTCA
GATACTGCCAGCCACCCAGGATATTTTGAAGGCACTAAATAAGCAACCATCTGTAGGGGAAAATAAGCCAGTGGAGCTT
CAACCAGAGAGGTCCTCTGAAGAGAGGCCGCATGAGAAACTCAGTGACCAGTCAGAGAGTAGTGACCTTGACGATGTCA
GTACCCCCAGTGGCAGTGACCTGGAAACCACCTCTGGCTCTGATCTGGAAAGTGACATTGAAAGTGAGAAAGAGAAATT
TAAAGAAAATGGTAAAATGTTCAAAGACAAAGTAAGCTCTCTGCAGAGTTTGGCTTCAATAAATAATAAGAAAGAACAC
AGCAATCATTCCATTTTCTCACCATCTTTAGAGGAGCAGACTGCGGTGTCAGGAGCGGTGAATGATTCTATAAAGGCTA
TTGCTTCTATTGCTGAAAAATACTTTGGTTCAACAGGACTTGTGGGGCTGCAAGACAAAAAAGTTGGAGCCTTACCTTA
CCCTTCCATGTTTCCCCTCCCATTTTTTCCAGCATTCTCTCAATCAATGTATCCATTTCCTGATAGAGACTTGAGACCG
TTACCCTTGAAAGTGGAGCCCCAATCACCCAGTGAACTCAAGAAGATCCCAAAGGGAAGCTCTGAGTCTCCCTTTGACC
TCACCACTAAGCGTAAGGAGGAGAAGCCCGTTACTCCCATACCCTCAAAGCCAGCAGCTCCGCCTGCGGCAAGCCAGGA
CCAGCCTCTAGATCTGAGCATGGGCAGTAGAAGTCGAGCCAGCAGCACAAAACAGGCCGAGCCCCGGAAAAACCACGTC
TTTGGTGAGAAGAAAGGAGGTGACCTCGAGCAGAGGAAAACGTCGGAGGCCTCTTTGCAGCACGCCCGACCAACTCCCT
TCTTTATGGATCCCATTTACAGAGTAGAGAAAAGAAAGTTAACTGACCCACTTGAAGCTTTAAAAGAGAAATACTTGAG
ACCTTCCCCGGGATTCTTGTTTCATCCACAATTCCAATTGCCTGATCAAAGAATTTGGATGTCAGCTATAGAGAACATG
GCCGAAAAGCTGGAGAGTTTCAGTGCCTTGAAGCCAGAGGCCAATGAGATGATCCAGTCAATGCCATCCATGTTCAACT
TCCGAGCCCCACCAAGTGCTCTGCCTGAGACCCTCCTGCGCAAGGGCAAGGAGCGCTACACCTGCAGATACTGTGGCAA
GATATTCCCCAGATCTGCAAACCTAACCCGTCACCTGAGGACGCACACTGGAGAGCAGCCCTACAGATGCAAATACTGT
GACAGGTCCTTTAGCATATCTTCCAACCTGCAGAGACATGTCCGTAATATCCACAATAAAGAGAAGCCATTCAAGTGTC
ACTTGTGTGACAGGTGTTTTGGTCAACAAACCAATCTTGACAGACATCTAAAAAAGCATGAGAATGGCAACATGTCTGG
TACTGCAACATCTTCACCTCACTCAGAACTGGAAAGCACAGGGGCCATCCTAGATGACAAGGAAGATTCTTACTTCACA
GAAATTAGGAATTTTATTGGAAACAGCAACCACAACAATCAATCCCCCCGAAACTCAGAGGAGAGAATGAATGGCAGCC
ACTTTAAGGATGAAAAAGCCATGGTAACCAGCCAGAACTCAGATTTGTTGGATGACGAAGAGGCAGAAGATGAAGTAAT
GATGGATGAAGAAGACGAAGAGAGTGAAATCGCAGGGAAAACAGTCAAAGAGCCTGTTACAAGTGACATACACGAGGGG
ACTCCTGAGGAGGATTACGAGGAAACGAGTACTTTGGACATGAACTGCAAAGCTTCCCCTGGCAGGTATAAAGAGGAGG
AATATAATAAGACTGGACTTTCAGCTTTGGACCACATAAGGCACTTCACAGATAGCCTCAAAATGAGGAAAATGGAAGA
AAATCAATATAGTGAAGCTGAATTGGCAGCTTTCAATACTTCCCAGCTGCCAGAGGACCTAAAACAACCATTGTACAGG
AAATCCAAATCCCAGGCATACGCCATGATGCTCTCTCTCTCTGACAAGGACTCCCTTCATTCTGCATCCCATAATTCTC
CCAATATGTGGCACAGCATGGCGAGAGCTGCTGCAGAATCCAGCGCCATCCAATCCATCAGTCACGTATGACATTGTGA
AGTCTTACCAAGAATGGGACCAAGTCCAAACCAGTAGCATGGCTCTTTCATATATGACTATTTAAAAGACTGCTGAGCA
GAATGCCTTATAAATCTGCAGGGTCACTCATTTAAAGTCTGGTGACCTTAAACTGAATAATTTTAAAAAGAAAGAAACT
ATTTATTCTCAATATTTTGTTTTGCACAGCAAAGGCAGCTGCTGACTTCTGGAGGATCAATGCGACTTAAAATAAAGAG
TTTCAGTGGATTATGTAAACCAGGGCCGGGAAAAAGTGTCTTCCAGTTCACCCGGCTTTGAGAGGCAGGGGCAAAAGGG
TTAAGACTGCATTGATACACACATGGGCACTCCTTTAAAGTAGTAACTGAATTGATTTTCTTTTTGTATAAAATAGTTT
GACACAGGATTGGGAACAGTTGCTTTTATGTACAAATCTCTTCATTAAAGCTTTATGCATTTTAGCCCTTCAAAGAAAG
AAAGAAAATAGTTATATGAAATGCACACTATCCATCATAAATGTAGAAAGAAGTAACAGGGAATATTTTGTTCTCTCCG
TAATTCTTTTGCCTTCTCAACTGCATTGTTAAAAAAAAAAGGAAAAATGAGAAAAAAAAAAGAAAAAAAAAAAAAGGAA
CTATGAGAAACAATACATACG
CitationYun Kee, Byung Joon Hwang, Paul W. Sternberg, Marianne Bronner-Fraser. Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest. Genes Dev. 2007 February 15; 21(4): 391–396.
CopyrightCopyright © 2007, Cold Spring Harbor Laboratory Press
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_422804.3).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 11
stage 11
Forebrain
Hindbrain
Midbrain
Neural Crest
Neural Plate/Tube
Spinal Cord
 

Entry 3

GEISHA IdEvi1.Celá.2013Data SourcePublication
Complete cDNA Template Probeshow
GCGCAGATCAGACAAACAAAAGTCAAAGTCCCCTCATGACCAACCCTCAGATACTGCCAGCCACCCAGGATATTTTGAA
GGCACTAAATAAGCAACCATCTGTAGGGGAAAATAAGCCAGTGGAGCTTCAACCAGAGAGGTCCTCTGAAGAGAGGCCG
CATGAGAAACTCAGTGACCAGTCAGAGAGTAGTGACCTTGACGATGTCAGTACCCCCAGTGGCAGTGACCTGGAAACCA
CCTCTGGCTCTGATCTGGAAAGTGACATTGAAAGTGAGAAAGAGAAATTTAAAGAAAATGGTAAAATGTTCAAAGACAA
AGTAAGCTCTCTGCAGAGTTTGGCTTCAATAAATAATAAGAAAGAACACAGCAATCATTCCATTTTCTCACCATCTTTA
GAGGAGCAGACTGCGGTGTCAGGAGCGGTGAATGATTCTATAAAGGCTATTGCTTCTATTGCTGAAAAATACTTTGGTT
CAACAGGACTTGTGGGGCTGCAAGACAAAAAAGTTGGAGCCTTACCTTACCCTTCCATGTTTCCCCTCCCATTTTTTCC
AGCATTCTCTCAATCAATGTATCCATTTCCTGATAGAGACTTGAGACCGTTACCCTTGAAAGTGGAGCCCCAATCACCC
AGTGAACTCAAGAAGATCCCAAAGGGAAGCTCTGAGTCTCCCTTTGACCTCACCACTAAGCGTAAGGAGGAGAAGCC
CitationCelá P, Balková SM, Bryjová A, Horáková D, Míšek I, Richman JM, Buchtová M. Expression, function and regulation of Evi-1 during embryonic avian development. Gene Expr Patterns. 2013 Dec;13(8):343-53. Epub 2013 Jul 3. DIO: 10.1016/j.gep.2013.06.002.
CopyrightCopyright © 2013 Elsevier B.V.
CommentsAuthors indicated that probes were synthesized from three different regions (E2, E4 and E8) of chicken Evi1 (XM_422804). The sequence of probe provided here was from E4 region. The probe was amplified by PCR using the following primers: 5'-GCGCAGATCAGACAAACAAA-3' and 5'-GGCTTCTCCTCCTTACGCTT-3'.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 13
stage 13
stage 13
stage 15
stage 15
stage 18
stage 18
Forebrain
Hindbrain
Intermediate Mesoderm
Midbrain
Pharyngeal Arches and Clefts
Pronephros
 
19-24
stage 20
stage 20
stage 22
stage 22
stage 22
stage 23
stage 23
stage 24
stage 24
stage 24
stage 24
Limb Buds
Myotome
Pharyngeal Arches and Clefts
Peripheral Mesenchyme
25-29
stage 25
stage 26
stage 27
stage 27
stage 29
stage 29
Limb Buds
Pharyngeal Arches and Clefts
Perichondrium and Interdigital areas
Peripheral Mesenchyme
all
 
 
  

Mouse

EmageMGI:95457
EurexpressMGI:95457
MGI GXDMGI:95457

Frog

Xenbase980194

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050208-123
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