GEISHA - A Chicken Embryo Gene Expression Database
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FABP5
fatty acid binding protein 5

Gene
Official SymbolFABP5
Official Full Namefatty acid binding protein 5
CGNC ID51203
also known asfatty acid binding protein 5|fatty acid binding protein 5 (psoriasis-associated)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001006346
PolypeptideNP_001006346
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.3323
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human2171ENSG00000164687MIM:605168
Mouse16592ENSMUSG00000027533All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:101790
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420197
Ensembl GeneENSGALG00000015764
KEGGgga:420197

Entry 1

GEISHA IdFABP5.Anderson.2020Data SourceDirect Submission
Complete cDNA Template Probeshow
CTGCGGGGACGCAGCCATTCGCCGCCGCCATTTTTTATGGCCATCGACACAATCCTTTAGGCAAATGGTGCCTGGTCTC
CAGCGAGGGCTTTGAGGACTACATGAAGGAGCTGGGTGTGGGTATGGCCATGAGAAAAATGGGAAGCATGGCGAAACCA
GATGTTTACATCATTAAGGAGGGGGATACAATTCTCTGTGAAAACGGAAAGCACCTTCTAAACTTCACAGTTCAGCTTC
AAGATTGGTGAGAAGTTTGAGGAAAACACATTAGATGGCAGACACACTCAGACCCTTGTCAGCTTAAAAGATGATGGGT
CATTGATCCAGGAGCAGGAATGGGATGGCAAGAAGACTGTAATAACACGGAAACTTGTGGATGGACAGTTGGTGGTGGA
ATGTGACATGAATGGTGTCAAGTGTGTTAGAGTCTACCAGAAGGCATGAGGACGTCTTCCAATTCAGTAGGAACATGCT
ACATACTATTCATTTCAGTGGACAGAGCTCCTTTACACTCCATAATTTTCCTTTTCCCTGT
CommentsImages and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST78j4.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Epiblast
Primitive Streak
stage 3+
4-6
stage 4
Epiblast
Primitive Streak
stage 4+
7-12
stage 8
stage 10
stage 10
stage 11
stage 12
Forebrain
Hindbrain
Midbrain
Neural Plate/Tube
Notochord
Rhombomeres
Somites
 
13-15
stage 13
stage 15
Forebrain
Hindbrain
Isthmus/MHB
Mesencephalon
Notochord
Somites
Telencephalon
 

Entry 2

GEISHA IdFABP5.Olivera-Martinez.2014Data SourcePublication
Complete cDNA Template Probeshow
TTAGCTTCTTCGGGGACGCAGCCACCGCCGCCGCCATCGCCATGGCCATCGACGCGTTTTTAGGCAAATGGTGCCTGGT
CTCCAGCGAGGGCTTTGAGGACTACATGAAGGAGCTGGGTGTGGGTATGGCCATGAGAAAAATGGGAAGCATGGCGAAA
CCAGATGTTTACATCATTAAGGAGGGGGATACAATCACTGTGAAAACGGAAAGCACCTTCAAAACTTCACAGTTCAGCT
TCAAGANTGGTGAGAAGTTTGAGGAAAACACATTAGATGGCAGAAAAACTCAGACCCTTGTCAGCTTAAAAGATGATGG
GTCATTGATCCAGGAGCAGGAATGGGATGGCAAGAAGACCGTAATAACACGGAAACTTGTGGATGGACAGTTGGTGGTG
GAATGTGACATGAATGGTGTCAAGTGTGTTAGAGTCTACCAGAAGGCATGAGGACGTCTTCCAATTCAGTAGGAACATG
CTACAAACAACTCAGTCCAGTGGACACAGCTCCTCTACACTCCATAATTTCCTTTTCCCTGTTTTGTAGTATTTCAATG
GACTGAGTAGCTGAGTGCAATCCTTTTTAAAAGCCGCGATGTAACTATTATGTAACTACTTATGAGGCTATTAAATAAA
ATTTTCAAATATATTAAGTGCAAATGTTGTTACTATAGTATAATTTTAAAGTGAGGTTTTATAAAAGCTTAGTGTGGTT
TAAGGCTCTACTACAAACTGCCTTCCCTTCAAGATAATGCAAATAATGGTAATGAGCAGTTAATAGCGGGCTACATTTT
AACCAGGCTTTTCATCCTTAATGGCTAAGGTAGTAAAAATATGACATAGAAAAGGAAGCATCAAAGTTCATGCTCTACA
GCTGCTTCTAATCTTAAATGTTAAAAGTAAATAGAAGGCTGGTATAGGTAGAGA
CitationIsabel Olivera-Martinez, Nick Schurch, Roman A Li, Junfang Song, Pamela A Halley, Raman M Das, Dave W Burt, Geoffrey J Barton, Kate G Storey. Major transcriptome re-organisation and abrupt changes in signalling, cell cycle and chromatin regulation at neural differentiation in vivo. Development 2014 Aug;141(16):3266-76. Epub 2014 Jul 25. DOI: 10.1242/dev.112623.
CopyrightCopyright © 2014. Published by The Company of Biologists Ltd.
CommentsAuthors indicated the probe was made from cDNA clone ChEST75n20. As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession number BU131880.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
Neural Plate/Tube
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.3323

Mouse

Emage
EurexpressMGI:101790
MGI GXDMGI:101790

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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