GEISHA - A Chicken Embryo Gene Expression Database
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FGD3
FYVE, RhoGEF and PH domain containing 3

Gene
Official SymbolFGD3
Official Full NameFYVE, RhoGEF and PH domain containing 3
CGNC ID50133
also known asFYVE, RhoGEF and PH domain-containing protein 3|FGD1 family, member 3
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_414331
PolypeptideXP_414331
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.53610
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human89846ENSG00000127084
Mouse30938ENSMUSG00000037946All phenotypic alleles (1):Targeted, other(1) MGI:1353657
Xenopus100490625995890
Zebrafish58075ZDB-GENE-000517-1ZFIN:ZDB-GENE-000517-1
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene415989
Ensembl GeneENSGALG00000005237
KEGGgga:415989
GEISHA IdFGD3.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGGCTCCTTTTCTGAAGATGTATGG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCCGCTTGGACTTGGAAGATTTCcDNA Template Length865
Forward cDNA Template Probeshow
CGCTCCCCCCAAATGCACCACTGGTCTGCTCCTGGCATCGATTCCACGGAGCTCGTACTTGCTATTGATGAATCAGGAA
GATGTTCCTCTTCTTGAGAAAAAGAACTATTGAAAGCTCTAAAGGTTTCACTGTTCTGTTTGTGCTTTTCAATTGTTGC
CTGGATGACCTGAATCCACTCCCTCTTCTCCTCTTCTGTCCTGGCCTGTAGTTCCAGTGATCTCTTTTTTCCTGTTATT
GAAAATGTATGAGCCACGTTTTGCTTGGCAATCTCTTGGACCTGCAGTCCTCCAATGTCCATCTTTTCTCGAACACTGA
ACTTCTGGCCTATCAACCTGAGTTTTGGCACACAGTACAGCACCATGCTGTTAAACAGGAATAAATACCTATCCTGTGC
TGTGCCATTCTTTGCTGAAAGTTTCTGAATGTGTCCTTCTTTAATGAGCTCATTGGCTGGGTTAACAATATCCTCTTCA
CCACCGAGTCGCTCATAGACTTCCAAAAGCTTGTGCATCTTTTCCATCTTTCTGATGGCAGCATTCGAATGGTTTGCTG
CTGTA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
stage 3
Primitive Streak
Low level expression confirmed.
Low level expression? Will redo to confirm.
4-6
stage 4
Primitive Streak
Low level expression? Will redo to confirm.
7-12
stage 7
stage 8
stage 9
stage 10
stage 10
stage 11
stage 11
Anterior/Second Heart Field
Extraembryonic Mesoderm
Forebrain
Headfold
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
low expression;
weak expression
13-18
stage 17
Ear/Otic Placode
Eye
Forebrain
Hindbrain
Limb Buds
Lung
Midbrain
Notochord
Pharyngeal Arches and Clefts
Somites
Spinal Cord
 
19-24
stage 20
stage 23
Eye
Forebrain
Hindbrain
Leg
Lung
Midbrain
Notochord
Pharyngeal Arches and Clefts
Somites
Widespread Expression
Wing
 
25-26
stage 26
Eye
Leg Mesenchyme
Notochord
Outflow Tract
Pharyngeal Arches and Clefts
Spinal Ganglia and Nerves
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.53610

Mouse

Emage
EurexpressMGI:1353657
MGI GXDMGI:1353657

Frog

Xenbase995890

Fruit Fly

BDGP

Zebra Finch

ZEBrAFGD3

Zebrafish

ZFINZDB-GENE-000517-1
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