GEISHA - A Chicken Embryo Gene Expression Database
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FNDC1
fibronectin type III domain containing 1

Gene
Official SymbolFNDC1
Official Full Namefibronectin type III domain containing 1
CGNC ID8865
also known asfibronectin type III domain-containing protein 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_419627
PolypeptideXP_419627
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.13654
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human84624ENSG00000164694MIM:609991
Mouse68655ENSMUSG00000071984All phenotypic alleles (1):Targeted, other(1) MGI:1915905
Xenopus100489154984125
Zebrafish557836ZDB-GENE-041210-332ZFIN:ZDB-GENE-041210-332
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene421589
Ensembl Gene
KEGGgga:421589
GEISHA IdFNDC1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-ACCACTCCCTCAACGACAAC-3’
Reverse cDNA Template Primer5’-ATTAACCCTCACTAAAGGCGCTTCACATACTGCTTGCC-3’cDNA Template Length977
Complete cDNA Template Probeshow
ACCACTCCCTCAACGACAACTACAACAACACCCCCAACTACTACAACAACAACTACTACAACCACCACAACAACTACTA
CAACTACCACTCCTGAACCAACTACAACTGAACCTCCCACTGAGAAACCACCCCCAACCTGTCCTCCAGGCACCTATGC
ACAGTATGATGATGAAGGCAACTTGCTGTTAGGGTTCGATGGCCTGCCAGAGTGCAATGCAGAAGTAGATACATTCTCA
GGACTGGATTCAGAAGTGACAGCAACTCCAGAGGCATATGTGATATACGATGATGATTATGAGTTTTTTGAGAGCACTT
TGTTACCGACCACCACTACTGTCACTACCACTACAACAACAGAATCAGAAATTGTCTATCCAGAGACTAGTGTTGTTGG
TACTGGTCCTGTATCAGAATATGACATTGCTGGGAAGAAACGGTTCACTGCACCTTATGTGACCTATCTAAATAAAGAT
CCAGCAGCCCCCTGCTCCTTGACAGAGGCCCTGGAGCACTTCCAAGTGGAAAGCCTTGATGAGATCATCCCTAATGATC
TTAAAGAGAAAGACACACGTCCCCTCAAAGCCCCTCACAACATCACTGTTGTGGCAGTAGAAGGCTGTCACTCCTTTGT
CATCGTGGACTGGGCCAAGCCTGCTCAAGGAGACATGGTAACAGGCTATCTGGTTTACAGTGCATCCTATGATGACTTT
TTAAAAAACAAGTGGTCAACTAGGACTGCAGGTACTACTCATCTGCCAATTGAGAACCTGAAGCCAAACACACGATATT
ATTTCAAAGTCCAAGCAAAGAACCCCTTTGGTTATGGACCTGTTAGCTCTTCAGTCTCATTTATCACAGAATCTGATAA
TCCCCTCCTTATTGTCAGACCACCTGGTGGTGAGCCTATCTGGATTCCATTCACTTTCAAATATGACCCCACCTATTCA
GATTGCAGTGGCAAGCAGTATGTGAAGCG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Area Opaca
Headfold
Neural Plate/Tube
Primitive Streak
Unlabeled
 
7-12
stage 8
stage 10
stage 11
Area Opaca
Blood Islands
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Primitive Streak
Sinus Venosus
Ventricles
 
13-18
stage 18
Widespread Expression
 
19-24
stage 20
stage 23
stage 23
stage 23
stage 23
Allantois
Aorta
Ear/Otic Placode
Foregut
Head Mesenchyme
Lung
Myotome
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sinus Venosus
Spinal Ganglia and Nerves
Widespread Expression
 
25-26
stage 26
stage 26
stage 26
stage 26
Ear/Otic Placode
Head Mesenchyme
Myotome
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.13654

Mouse

Emage
EurexpressMGI:1915905
MGI GXDMGI:1915905

Frog

Xenbase984125

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041210-332
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