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FOXD1
forkhead box D1

Gene

Official Symbol	FOXD1
Official Full Name	forkhead box D1
CGNC ID	49653
also known as	BF-2, CBF-2, HFH-BF-2, T-14-6, forkhead box protein D1\|brain factor-2\|winged helix protein CWH-4
gene type	protein-coding

Genomic Map

Sequence Information

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.51521

Orthology

Gene Ontology

Molecular Function	sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity
Biological Process	axon guidance, dichotomous subdivision of terminal units involved in ureteric bud branching, more...
Cellular Component	nucleus

Links to other databases

GEISHA Id	FOXD1.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5’-CCCGCATCTCTAACTGTTAAGGG-3’
Reverse cDNA Template Primer	5’-ATTAACCCTCACTAAAGGTCCCTCAAGCCTTCTCTGTTC-3’	cDNA Template Length	428
Complete cDNA Template Probe	show `CCCGCATCTCTAACTGTTAAGGGGTTCGGAGTCTTTCCGAAGGTAGGATCTGGGCTCTTTTTCTTTGCCGCTCGGATGC CCGGCGGACGCACGGAGGAGCGGCTTTGCGCGGGATTTGCGCGGGATTTGCGCGCGGTTTGCGCGTTGGGGATATATGA GGCCGTTCTCTGTGGCCGGCGGGTTGTCCGGGACCGGTCCGATGCACAGCCAGGTCGGTGTGCTGCACGGGCAGGCGGT CACGCTGTTGGAAAGTTACTCGTTACTCCTTAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAG AAGAAAAAAAGTAATAATAATAAATAACGTCTCTAAACCGTCAAAGTTCAGAGATTCTCAGGTCTAGGAGCTTGAAAAC AGTGATTTACAGGAACAGAGAAGGCTTGAGGGA`

Stage

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7-12

stage 12

13-18

stage 18

19-24

stage 20

stage 21

stage 23

stage 25

GEISHA Id	CBF2.Takahashi.2003	Data Source	Publication
Complete cDNA Template Probe	show CCGCGGCGCTGCCCCCCCCGCCGCCGCCGCCGCCGCCGCCGCGCCGCCGGGCCCCTTTGCTGCCGGCTGCGGAGCTGGC ACGGACGCCCTTCGGCTACCCGCACCCGCTGGGCCCGGCGCTGGCGGCCTCGCTGCACGCCGCCAAGCCCGGCAGCGGC GCGGCGGTGGCCCGCTCGCCCTTCTCCATCGAGAGCATCATCGGGGGGGGGCCGGGCCCCGGCCTGGGTGCCGGCCCCG CTCCCGGTGCGGGCGGCAGCTGCGCCTCGCAGTCGGGCGCGGCGACGGGGCTGTCCCGCTCGCTGGGGAGCGGCCTGGC ACCCGCCGCCGCGCTGCCCGCCGCGCCCGGCCTGGCGGCCCGCATCTCTAACTGTTAAGGGGTTCGGAGTCTTTCCGAA GGTAGGATCTGGGCTCTTTTTCTTTGCCGCTCGGATGCCCGGCGGACGCACGGAGGAGCGGCTTTGCGCGGGATTTGCG CGGGATTTGCGCGCGGTTTGCGCGTTGGGGATATATGAGGCCGTTCTCTGTGGCCGGCGGGTTGTCCGGGACCGGTCCG ATGCACAGCCAGGTCGGTGTGCTGCACGGGCAGGCGGTCACGCTGTTGGAAAGTTACTCGTTACTCCTTAAAAAAAAAA GAAAGAAAGAAAGAAAGAAAGAGA
Citation	Takahashi H, Shintani T, Sakuta H, Noda M. CBF1 controls the retinotectal topographical map along the anteroposterior axis through multiple mechanisms. Development. 2003 Nov;130(21):5203-15. Epub 2003 Sep 3.
Copyright	Published by The Company of Biologists 2007. This material is protected by a copyright retained by the authors.
Comments	Authors indicated the probe was the 656 bp fragment of chick CBF2 (1191-1846; U47276).