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FOXD3 Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol FOXD3 Official Full Name forkhead box D3 CGNC ID 49481 also known as forkhead box protein D3|HNF3/FH transcription factor genesis|winged helix protein CWH-3 gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Entrez Gene Ensembl Gene Genetic Phenotypes MOD Fruit Fly Human Mouse Xenopus Zebrafish
Gene Ontology Links to other databases
Entry 1 GEISHA Id FoxD3.McKeown.2005 Data Source Publication Complete cDNA Template Probe show GCGGGGATGACTCTATCGGGCGGCGGCAGCGATATGTCCGGCCAGACCGCGCTGGCGGCCGAGGACGTGGATATCGACG
Citation McKeown S, Lee V, Bronner-Fraser M, Newgreen D, Farlie P. Sox10 Overexpression Induces Neural Crest-Like Cells From All Dorsoventral Levels of the Neural Tube but Inhibits Differentiation. Dev Dyn. 2005 Jun;233(2):430-44. Copyright Copyright © 2005 Wiley-Liss, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204951). Plasmid documented in Dottori et al.,
2001
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-10
stage 10
Neural Crest
Entry 2 GEISHA Id FOXD3.Schmidt.2007 Data Source Publication Complete cDNA Template Probe show GCGGGGATGACTCTATCGGGCGGCGGCAGCGATATGTCCGGCCAGACCGCGCTGGCGGCCGAGGACGTGGATATCGACG
Citation Schmidt C, McGonnell IM, Allen S, Otto A, Patel K. Wnt6 controls amniote neural crest induction through the non-canonical signaling pathway.Dev Dyn. 2007 Sep;236(9):2502-11. Copyright Copyright © 2007 Wiley-Liss, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204951).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 18
stage 18
stage 18
Neural Crest Neural Plate/Tube
Entry 3 GEISHA Id FOXD3.Jin.2001 Data Source Publication Complete cDNA Template Probe show GCGGGGATGACTCTATCGGGCGGCGGCAGCGATATGTCCGGCCAGACCGCGCTGGCGGCCGAGGACGTGGATATCGACG
Citation Jin EJ, Erickson CA, Takada S, Burrus LW (2001). Wnt and BMP signaling govern lineage segregation of melanocytes in the avian embryo. Dev Biol. 2001 May 1;233(1):22-37. Copyright Copyright © 2001 Academic Press. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204951).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13 stage 13
stage 13
Neural Crest
Entry 4 GEISHA Id FOXD3.Khudyakov.2009 Data Source Publication Complete cDNA Template Probe show GCGGGGATGACTCTATCGGGCGGCGGCAGCGATATGTCCGGCCAGACCGCGCTGGCGGCCGAGGACGTGGATATCGACG
Citation Khudyakov J, Bronner-Fraser M. Comprehensive spatiotemporal analysis of early chick neural crest network genes. Dev Dyn. 2009 Mar;238(3):716-23. Copyright Published Online: 22 Feb 2009
Copyright © 2009 Wiley-Liss, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204951).
Entry 5 GEISHA Id FOXD3.Coles.2007 Data Source Publication Complete cDNA Template Probe show GCGGGGATGACTCTATCGGGCGGCGGCAGCGATATGTCCGGCCAGACCGCGCTGGCGGCCGAGGACGTGGATATCGACG
Citation Coles EG, Taneyhill LA, Bronner-Fraser M. A critical role for Cadherin6B in regulating avian neural crest emigration. Dev Biol. 2007 Dec 15;312(2):533-44. Epub 2007 Oct 5. Copyright Copyright © 2007 Elsevier Inc. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence to synthesize probe. Sequence below was obtained from NCBI (NM_204951).
Entry 6 GEISHA Id FOXD3.Taneyhill.2005 Data Source Publication Complete cDNA Template Probe show GCGGGGATGACTCTATCGGGCGGCGGCAGCGATATGTCCGGCCAGACCGCGCTGGCGGCCGAGGACGTGGATATCGACG
Citation Taneyhill LA, Bronner-Fraser M. Dynamic alterations in gene expression after Wnt-mediated induction of avian neural crest. Mol Biol Cell. 2005 Nov;16(11):5283-93. Epub 2005 Aug 31. Copyright Copyright 2004, MBC Online by The American Society for Cell Biology. Comments Insufficient information provided in publication to verify exact sequence to synthesize probe. Sequence below was obtained from NCBI (NM_204951).
Entry 7 GEISHA Id FOXD3.Blentic.2008 Data Source Publication Complete cDNA Template Probe show GCGGGGATGACTCTATCGGGCGGCGGCAGCGATATGTCCGGCCAGACCGCGCTGGCGGCCGAGGACGTGGATATCGACG
Citation Blentic A, Tandon P, Payton S, Walshe J, Carney T, Kelsh RN, Mason I, Graham A. The emergence of ectomesenchyme. Dev Dyn. 2008 Mar;237(3):592-601. Copyright Copyright © 2008 John Wiley & Sons, Inc. All Rights Reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204951.1)
Entry 8 GEISHA Id FOXD3.Groysman.2008 Data Source Publication Complete cDNA Template Probe show GCGGGGATGACTCTATCGGGCGGCGGCAGCGATATGTCCGGCCAGACCGCGCTGGCGGCCGAGGACGTGGATATCGACG
Citation Groysman M, Shoval I, Kalcheim C. A negative modulatory role for rho and rho-associated kinase signaling in delamination of neural crest cells. Neural Dev. 2008 Oct 22;3:27. Copyright Copyright © 2008 Groysman et al.; licensee BioMed Central Ltd. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204951
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-15 stage 15
Neural Crest
Entry 9 GEISHA Id FoxD3.Hu.2012 Data Source Publication Complete cDNA Template Probe show GCGGGGATGACTCTATCGGGCGGCGGCAGCGATATGTCCGGCCAGACCGCGCTGGCGGCCGAGGACGTGGATATCGACG
Citation Hu N, Strobl-Mazzulla P, Sauka-Spengler T, Bronner ME. DNA methyltransferase3A as a molecular switch mediating the neural tube-to-neural crest fate transition. Genes Dev. 2012 November 1; 26(21): 23802385. Copyright Copyright © 2012 by Cold Spring Harbor Laboratory Press
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-10 stage 10
stage 10
Neural Crest
Entry 10 GEISHA Id FOXD3.Ferronha.2013 Data Source Publication Complete cDNA Template Probe show GCGGGGATGACTCTATCGGGCGGCGGCAGCGATATGTCCGGCCAGACCGCGCTGGCGGCCGAGGACGTGGATATCGACG
Citation Ferronha T, Rabadán MA, Gil-Guiñon E, Le Dréau G, de Torres C, Martí E.
LMO4 is an essential cofactor in the Snail2-mediated epithelial-to-mesenchymal transition of neuroblastoma and neural crest cells. J Neurosci. 2013 Feb 13;33(7):2773-83.
Copyright Copyright @ 2013 by the Society of Neuroscience
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204951.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-10 stage 10
stage 10
Neural Crest
Entry 11 GEISHA Id FOXD3.Trevers.2023 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show CCGCGGGCGCGGAGCGGTGGAGCGGAGGGGCCCCGCGGGCGGCGGGCGGGAGGCAGCGGCGCCGCCCGAGCCCCGATGC
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204951 ).
Data from NCBI Unigene EST ProfileGga.468
Mouse Frog Fruit Fly Zebra Finch Zebrafish
