Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

FGF16
fibroblast growth factor 16

Gene

Official Symbol	FGF16
Official Full Name	fibroblast growth factor 16
CGNC ID	5902
also known as	fibroblast growth factor 16, fibroblast growth factor 16 , FGF16
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001044650
Polypeptide	NP_001038115
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.31620

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	8823			MIM:300827
Mouse	80903		All phenotypic alleles (6):Targeted, knock-out(1) Targeted, other(5)	MGI:1931627
Xenopus	100492309			483588
Zebrafish	692065	ENSDARG00000042233	ZDB-GENE-060427-3	ZFIN:ZDB-GENE-060427-3

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	422330
Ensembl Gene	ENSGALG00000007806
KEGG	gga:422330

Entry 1

GEISHA Id	FGF16.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	TTATAAAAGCTTGCGGCCGCAGAATATCGGGATTTTGGAGTTCATCAGC
Reverse cDNA Template Primer	GCTCTAGAAATTAACCCTCACTAAAGGGCAGGTATTTTGGCAGGGTCC	cDNA Template Length	321
Forward cDNA Template Probe	show `ACCCTGGCAGTGGGGCTGGTTATATCCGTGGGGTGGATTCAGGACTCTACCTCGGCATGAACGAGAGAGGCGAGCTGTA TGGGTCGAAGAAGCTCACAAGGGAATGTGTTTTCCGAGAGCAGTTTGAAGAGAACTGGTACAACACGTACGCCTCAACG CTCTACAAGCATCCGGACTCGGAGAGGCATTACTACGTGGCTCTGAACAAGGACGGCTCCCCCCGCGAGGGGTACAGGA CTAAGAGACATCAGAAATTCACTCACTTTTTACCGAGGCCCGTGGACCCTGCCAAAATACCTGCCCTTTAGTGAGGGTT AATTTCTAGAGCAA`
Comments	No expression detected at or below stage 7.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 7

stage 11

Anterior Neuropore
Ear/Otic Placode
Unlabeled

Stages 6-7.

13-18

stage 13

stage 16

stage 18

Anterior Neuropore
Ear/Otic Placode
Nasal Placode/Nerve

Dorsal view.
Low level expression in the Nasal Placode.
Ventral view.

19-24

stage 20

stage 21

Ear/Otic Placode
Leg
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Wing

stage 25

Ear/Otic Placode
Leg Mesenchyme
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Somites
Wing Mesenchyme

Entry 2

GEISHA Id	Fgf16.Chapman.2006	Data Source	Publication
Complete cDNA Template Probe	show ATGGCCGAGGTGGGCGGCTTCCTGGGCGCGCTGGACCCCGACCTGCACGGCTTCCCCCCCGCGCTGGGCGGGCTGCCCC TCGCCGATTCGCCCGGCTTCCTCAACGAGCGCCTGGGGCAGATCGAGGGGCGGCTGCAGCGGGGCTCCCCCACCGACTT CGCGCACCTCAAGGGCATCCTGCGGCGGCGGCAGCTCTACTGCCGCACCGGCTTCCACCTGGAGATCTTCCCCAACGGC ACGGTGCACGGCACCCGGCAGGACCACAGCCGCTTCGGGATTTTGGAGTTCATCAGCCTGGCAGTGGGGCTGGTTAGTA TCCGTGGGGTGGATTCAGGACTCTACCTCGGCATGAACGAGAGAGGCGAGCTGTATGGGTCGAAGAAGCTCACAAGGGA ATGTGTTTTCCGAGAGCAGTTTGAAGAGAACTGGTACAACACGTACGCCTCAACGCTCTACAAGCATCCAGACTCGGAG AGGCATTACTACGTGGCTCTGAACAAGGACGGCTCCCCCCGCGAGGGGTACAGGACTAAGAGACATCAGAAATTCACTC ACTTTTTACCGAGGCCCGTGGACCCTGCCAAAATACCTGCAGTGTACAGAGACCTCTTCCACTACAGGTGA
Citation	Chapman SC, Cai Q, Bleyl SB, Schoenwolf GC. Restricted expression of Fgf16 within the developing chick inner ear. Dev Dyn. 2006 Aug;235(8):2276-81. PMID: 16786592 [PubMed - indexed for MEDLINE]
Copyright	Copyright © 2006 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_001044650).