GEISHA - A Chicken Embryo Gene Expression Database
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FOXI2
forkhead box I2

Gene
Official SymbolFOXI2
Official Full Nameforkhead box I2
CGNC ID
also known asforkhead box protein I2|forkhead box protein I1-ema-like
gene typeunknown
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNA
Polypeptide
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
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Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene101748691
Ensembl Gene
KEGG

Entry 1

GEISHA IdFoxi2.Khatri.2013Data SourcePublication
Complete cDNA Template Probeshow
GGGAAAAGAGTCACTCTGTCACTGTAGGAAGAAAAGGAAAAGCCTTTGGAGAGCTTGAAAACGAAGACTTAAAGGTGGG
CAGCTAAAAGGACAAACACTGTCGAGCAAATCTGTCGCAGACCAAGATGCTCACAGTGTGCTGTGCCTTCTGCAGTGGA
ACAGTGACAGGACAGCCCATGTTTTACACTGAACTCCTATTTAGAACAGCTGCTCCCACTTCCTTTCAGCTGAAACGAG
GGGAGTGGATTCCAATGTGTGTTGCTCCAGGAGAAATCACAGCCTGATGCTGTTGGTGCGAACTGCCCACCTCTCCATC
AGCCTGGCCAGAAAATTAAGGAATGCTTTGTTTGAGTGAATCCCTGTGTTTCAGTCTCTCCACACGAGCCCCTGTCCAC
AGCCTCCTTTGGACCCACATTTTATGAGAGAGGAGGATAAGGGATGCAGAAGCACAGCGTTTACAGGATGTCAGCCGCG
TGGATTGGCATCGACCAAAGCAGAGTACAAATTCTACCCGAAGTTTAATACCAGCAGTACGAAGTGAAAGCAGTCCGTT
CCCTCTCTCCCAGCAGGCGCGCCGGGCCGGCGGCGGACCCTCAGTCAGATCTACCAATACGTGGCCGAGAACTTCCCCT
TCTACAAGAAGAGCAAGGCGGGCTGGCAGAACTCCATCCGACACAACCTCTCCCTCAACGACTGCTTCAGGAAGGTCCC
GCGGGACGAGGATGACCCGGGTAAAGGCAACTACTGGACGCTGGACCCCAACTGCGAGAAAATGTTCGATAATGGCAAC
TTCAGGAGGAAGAGGAAGAGGCGTCCGGAGGCCGGAGACAGCGGAGGGGCCGCGGGGGGCCCCTGTGTGAGCACAGCCC
CCGGGCACGGAGAGATGCACTGAGGCGGAGGAAGGAATATTTTTCCCCCTATTAGATGCTGAAAGGAATCACCATGGGG
TGAGCTGGGTGAGACGGTGGCTTTCCTTCCCCCTTGACAAGAGCAGCCTGTCCCAGCCTTGCCTGCTGACCTGCCCCAC
GGATGCCCGAAGTGCCTTCCTCTCCTCTGTCCAGGTGTGCAGCTGGGATGCCCTCACTGCGATGCACAGCTCTCTGATG
TGGTTGGGGTGGTGATGGGCTCACTGAGTGGGGAGGAACAGCAGGACGTGCCCCTGGAGCTGGGCATGGCGTGTGGGGC
AGCCAGCCCCCCATCCTCTACGGTACTTCTGAATAAAACCCCTTTATTTTCCCTC
CitationKhatri SB, Groves AK. Expression of the Foxi2 and Foxi3 transcription factors during development of chicken sensory placodes and pharyngeal arches. Gene Expr Patterns. 2013 Jan-Feb;13(1-2):38-42. DOI: 10.1016/j.gep.2012.10.001. Epub 2012 Oct 31.
CopyrightCopyright © 2012 Elsevier B.V. All rights reserved.
CommentsAuthors indicated that cDNA probe for chicken Foxi2 was obtained from the UMIST Chick EST Repository (clone ID chEST912M14).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
stage 9
stage 11
stage 11
stage 11
stage 11
stage 12
stage 12
stage 12
stage 12
Ectoderm
Surface Ectoderm
Anterior and lateral to the otic placode region, 8 somites stage
Anterior to the otic placode region, 7 somites stage
Cranial ectoderm excluding otic placode region, 16 somites stage
Cranial ectoderm excluding otic region; 13 somites stage
13-16
stage 13
stage 13
stage 13
stage 13
stage 13
stage 13
stage 16
stage 16
stage 16
stage 16
stage 16
Pharyngeal Arches and Clefts
Surface Ectoderm
Cranial ectoderm excluding the otic cup region, 21 somites stage
Pharyngeal arch region ectoderm
all
 
  

Entry 2

GEISHA IdFOXI2.Freter.2012Data SourcePublication
Complete cDNA Template Probeshow
GCGGCTCGAGCGGGGGGGCACCTGCGGCTTTCTGTAAGCGCGCAGAGGAGTTCGCTCCGATTCGGGAGTATTCGGTATT
AGGAGCGCACGTCGGACCACAGCGCGCCGGGCCGGCGGCGGACCCTCAGCCAGATCTACCAATACGTGGCCGAGAACTT
CCCCTTCTACAAGAAGAGCAAGGCGGGCTGGCAGAACTCCATCCGACACAACCTCTCCCTCAACGACTGCTTCAGGAAG
GTCCCGCGGGACGAGGATGACCCGGGTAAAGGCAACTACTGGACGCTGGACCCCAACTGCGAGAAAATGTTCGATAATG
GCAACTTCAGGAGGAAGAGGAAGAGGCGTCCGGAGGCCGGAGACAGCGGAGGGGCCGCGGGGGGCCCCTGTGTGAGCAC
AGCCCCCGGGCACGGAGAGATGCACTGAGGCGGAGGAAGGAATATTTTTCCCCCTATTAGATGCTGAAAGGAATCACCA
TGGGGTGAGCTGGGTGAGACGGTGGCTTTCCCTCCCCCTTGACAAGAGCAGCCTGTCCCAGCCTTGCCTGCTGACCTCC
TGCCCCACGGATGCCCGAAGTGCCTTCCTCTCCTCTGTCCAGGTGTGCAGCTGGGATGCCCTCACTGCGATGCACAGCT
CTCTGATGTGGTAGGGGTGGTGATGGGGTCACTGAGTGGGGAGGAACAGCAGGGACGTGCCCCTGGAAGCTGGGGCATG
GCGTGTGGGGGCAGCCAGACCCCCAATCTCTACGGTAACTTCTGAATTAAAACCCCTTTATTGCCCCA
CitationFreter S, Muta Y, O'Neill P, Vassilev VS, Kuraku S, Ladher RK. Pax2 modulates proliferation during specification of the otic and epibranchial placodes. Dev Dyn. 2012 Nov;241(11):1716-28
CopyrightCopyright © 2012 Wiley Periodicals, Inc.
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Freter et al. 2012.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 11
stage 11
stage 11
Cranial Ganglia
Cranial Nerve
Ear/Otic Placode
Ectoderm
control = left side of embryo
all
 
 
  

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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