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GBX2 Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol GBX2 Official Full Name gastrulation brain homeobox 2 CGNC ID 10048 also known as homeobox protein GBX-2|gastrulation and brain-specific homeobox protein 2|gastrulation brain homeo box 2|gastrulation brain homeobox 2 protein gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Links to other databases
Entry 1 GEISHA Id GBX2.Vieira.2005 Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation Vieira C, Garda AL, Shimamura K, Martinez S. Thalamic development induced by Shh in the chick embryo. Dev Biol. 2005 Aug 15;284(2):351-63. Copyright Copyright © 2005 Elsevier Inc. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205068).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-23
stage 23
stage 23
Central Nervous System
Entry 2 GEISHA Id GBX2.Bok.2005 Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation Bok J, Bronner-Fraser M, Wu DK. Role of the hindbrain in dorsoventral but not anteroposterior axial specification of the inner ear. Development. 2005 May;132(9):2115-24. Epub 2005 Mar 23. Copyright Copyright for articles in Development are retained by the authors. Permission granted by MBF. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205068).
no images
Entry 3 GEISHA Id GBX2.Garcia-Lopez.2009 Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation García-López R, Soula C, Martínez S. Expression analysis of Sulf1 in the chick forebrain at early and late stages of development. Dev Dyn. 2009 Sep;238(9):2418-29. Copyright Copyright © 2009 John Wiley & Sons, Inc. All Rights Reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205068.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 31-40 stage 40
Diencephalon
Entry 4 GEISHA Id GBX2.Sanchez-Calderon.2004 Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation Sánchez-Calderón H, Martín-Partido G, Hidalgo-Sánchez M. Otx2, Gbx2, and Fgf8 expression patterns in the chick developing inner ear and their possible roles in otic specification and early innervation. Gene Expr Patterns. 2004 Oct;4(6):659-69. Copyright Reprinted with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_205068).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
Ear/Otic Placode 25-30 stage 27
stage 27
stage 27
Ear/Otic Placode 31-34 stage 34
stage 34
stage 34
Ear/Otic Placode
Entry 5 GEISHA Id GBX2.Paxton.2010 Data Source Publication Complete cDNA Template Probe show GGTGCAGGTGAAGATCTGGTTCCAGAACAGGCGAGCCAAATGGAAGCGGGTGAAGGCGGGCAACGCCAGCTCCAAGGCG
Citation Paxton CN, Bleyl SB, Chapman SC, Schoenwolf GC.
Identification of differentially expressed genes in early inner ear development. Gene Expr Patterns. 2010 Jan;10(1):31-43. Epub 2009 Nov 11.
Copyright 2009 Elsevier B.V. All rights reserved. Comments The cDNA template used to generate the probe was obtained by PCR as described 5-ggtgcaggtgaagatctggt-3; 5-attcacaagacgggagttgg −3
Entry 6 GEISHA Id GBX2.Merchan.2011 Data Source Publication Complete cDNA Template Probe show AGCGACCTCGACTACAGCTCCGACGAGAACGGCCCCGCGCCGGCGGCCCCGCGGGAGGAGGACTGTGGCACCGCGTTGG
Citation Merchán,P, Bardet, SM, Puelles, L, Ferran, JL, Comparison of Pretectal Genoarchitectonic Pattern between Quail and Chicken Embryos. Front Neuroanat. 2011; 5: 23. Prepublished online 2010 December 29. Published online 2011 April 5 Copyright Copyright © 2011 Merchán, Bardet, Puelles and Ferran. Comments The probe was amplified by PCR using the following primers: 5′-AGCGACCTCGACTACAGCTC-3' and 5′-ATTCACAAGACGGGAGTTGG-3′and was extracted form NCBI acc. # NM_205068.1.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-27 stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 27
stage 27
stage 27
stage 27
Diencephalon Mesencephalon Unlabeled Embryonic
Entry 7 GEISHA Id GBX2.Tossell.2011 Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation Tossell K, Kiecker C, Wizenmann A, Lang E, Irving C.
Notch signalling stabilises boundary formation at the midbrain-hindbrain organiser. Development. 2011 Sep;138(17):3745-57. Epub 2011 Jul 27.
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_205068).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-10 stage 9
stage 9
stage 9
stage 9
stage 9
stage 10
stage 10
Isthmus/MHB Rhombomeres
Entry 8 GEISHA Id GBX2.Tossell.2011B Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation Tossell K, Andreae LC, Cudmore C, Lang E, Muthukrishnan U, Lumsden A, Gilthorpe JD, Irving C.
Lrrn1 is required for formation of the midbrain-hindbrain boundary and organiser through regulation of affinity differences between midbrain and hindbrain cells in chick. Dev Biol. 2011 Apr 15;352(2):341-52.
Copyright Copyright © 2011 Elsevier Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_205068).
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Entry 9 GEISHA Id GBX2.Larsen.2001 Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation Larsen CW, Zeltser LM, Lumsden A. Boundary formation and compartition in the avian diencephalon. J Neurosci. 2001 Jul 1;21(13):4699-711. Copyright Copyright © 2012 by the Society for Neuroscience
Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205068.1).
no images
Entry 10 GEISHA Id GBX2.Sánchez-Guardado.2009 Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation Sánchez-Guardado LO, Ferran JL, Mijares J, Puelles L, Rodríguez-Gallardo L, Hidalgo-Sánchez M. Raldh3 gene expression pattern in the developing chicken inner ear. J Comp Neurol. 2009 May 1;514(1):49-65. doi: 10.1002/cne.21984. Copyright Copyright © 19992013 John Wiley & Sons, Inc. All Rights Reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_205068.1
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-20 stage 20
stage 20
Ear/Otic Placode
Entry 11 GEISHA Id Gbx2.Jungbluth.2001 Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation Stefan Jungbluth, Chris Phelps, Andrew Lumsden. CEPU-1 expression in the early embryonic chick brain. Mech Dev. 2001 Mar;101(1-2):195-7. Copyright Copyright © 2001 Elsevier Science Ireland Ltd. Comments Authors indicated that Gbx2 probe was a gift of A. Leutz. As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession NM_205068.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-11 stage 11
Isthmus/MHB all
Entry 12 GEISHA Id Gbx2.Hidalgo-Sánchez.1999 Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation Hidalgo-Sánchez M, Millet S, Simeone A, Alvarado-Mallart RM. Comparative analysis of Otx2, Gbx2, Pax2, Fgf8 and Wnt1 gene expressions during the formation of the chick midbrain/hindbrain domain. Mech Dev 1999 Mar;81(1-2):175-8. Copyright Copyright © 1999 Elsevier Science Ireland Ltd. Comments Authors indicated the probe was synthesized from the full-length chicken GBX2 cDNA. Above sequence is obtained from NCBI Accession number NM_205068.1.
Entry 13 GEISHA Id GBX2.Freter.2012 Data Source Publication Complete cDNA Template Probe show GAATTCCGGGGAGGAGGAAGAAGGTGGTCGCCGCTGCTCCTCCGCCGGCCCGGCATGAGCGCGGCTTTCCAGCCCTCGC
Citation Freter S, Muta Y, O'Neill P, Vassilev VS, Kuraku S, Ladher RK. Pax2 modulates proliferation during specification of the otic and epibranchial placodes. Dev Dyn. 2012 Nov;241(11):1716-28 Copyright Copyright © 2012 Wiley Periodicals, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_205068.1). GBX2 is also known as: GBX1 in NCBI.
Entry 14 GEISHA Id GBX2.Trevers.2023 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show AAAATGTGAATGGGCGCGGGGGAGCGGGCGGGCAGAGGCAGCGCGGTGCGGGGCGGCGGGGGGCGGCCGGCCCCGATGT
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205068.2 ).
Data from NCBI Unigene EST ProfileGga.565
Mouse Frog Fruit Fly Zebra Finch Zebrafish
