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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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GCM2
glial cells missing homolog 2

Gene

Official Symbol	GCM2
Official Full Name	glial cells missing homolog 2
CGNC ID	9680
also known as	chorion-specific transcription factor GCMb\|glial cells missing 2
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001008480
Polypeptide	NP_001008480
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.22891

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	9247	ENSG00000124827		MIM:603716
Mouse	107889	ENSMUSG00000021362	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:1861438
Xenopus	100488293, 496398			492155
Zebrafish	449615	ENSDARG00000045413	ZDB-GENE-050127-1	ZFIN:ZDB-GENE-050127-1

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	428478
Ensembl Gene	ENSGALG00000012768
KEGG	gga:428478

Entry 1

GEISHA Id	GCM2.Grevellec.2011	Data Source	Publication
Complete cDNA Template Probe	show GGCCTCCAGCATGAAGCTTACCTGGGACATCAACGACCCCAAGCTGCCGCAGGAGCCCGAGCGCTTCGATGCCTTCCAG GAGTGGCCGGACGGCTACGTGCGCCTCATCTACTCCAGCGAGGAGAAGAATGCACAGCGGCACCTGAGCGGCTGGGCCA TGCGCAACACCAACAACCACAACTGCCAGATCCTGAAGAAGTCCTGCCTGGGGGTCGTGGTGTGCGCGGGGAGCTGTGC CCTGCCCGGAGGTGCCAGGCTGCAGCTGCGGCCCGCCATCTGTGACAAGGCGCGGCAGAAGCAGCAAAAGAAAGCCTGT CCAAACTGCAATGCAGCCCTCCAGCTCATCCCTTGCCGTGGGCACAGTGGCTATCCCGTCACCAACTTCTGGAGGCTGG ATGGCAAAGCAATATTTTTTCAGGCTAAAGGAGTCCACGACCACCCTAGACCAGAGAGTAAATTGGAGGCAGAGGCAAG ACGAAGTGCAATTAAGAAGCAAATGTTTTCTTCTCAGAATTCCCAGAAAAAGAGACTTCTAAACACACAGGCTGGAAGA TATCATGATAGCAGTGGTTATGTCAGTAACATGCAAAATCTGCCCTCCATAGATGTCCCAGAAAGAGTCAGCATCATCA CAGACACCAGTTTTTCAATTCCAGCTCAGTCTTACCCTTTGCCACAAAATACTGACCTCTACAAGATGCCTTATGACTC AGCCAGCTTCCAAGAGGACCAGGTGTTGCCATACCAGAAGTGCCCCAATCCTAGAATCTATGTGCCCAGGCCATGTAGT TACGAGTTTGGAGTTCCTTCCTTCATTGGCTCCAGCCCTTATTCATCATGTTATAAAGATCCAGCAAATCCTCCCCTCG ATGCCGACCCTATCAGTTTGAATGGATCTCACTATAATTCCTTGACAAGCATTGACAAGAGCTTTGACCATACTGGTAG GCATTATGGACTGAAACCAATCTGGGGGAAAACTGGCAGTGGAGACAGGAGCGACTATGGTCAGATGCAAACAAGCACT AACCACCCTTATTATGGTGGTGAGTACTCCGGCAAATATGGTCCCAGTCCTTCTCCCATGGCCCCACCACTACAGACTG TCATCACAACCACCACAAAGGTGTCCTACCAGGCCTACAAGCCATCCATGCTGAAATACAGTGAGAACCTCTGTGATAT GAAAAACCTTCAGAGCTATACACATGTGGCTGAAAATGTCTCAGGCACTATCTATTCAGGGATGAAGATTCAGGAAGAC TTTGGGATGATCAAGTCAGCATTGCTCTACCAGCATGACCCAATCACCACAAAGTCCGAACCAGGTGAGAGCGTGGAGG CCTATCGGTATGGCTTACCGCTGGGGAACAGCTATGCTGAGCATGAAGGACAAGCCTTAAGGTTTGAAAGTGCTGAATA TTGACTAAATGTTACCTAAATTCTATTGAGATTGTCAACTGGGAAATTAATGGTTGCACTAATGGTACGTTGTTTGAGA TTTGAGGAGGTGTGAGAAAGCAGTGTGTTGTTGCTTTCTGGAGCTGAATAAAGCATATTTCCCCCACCAAAAAAAAAAA AAAAAAAAAAAAAAAAAAA
Citation	Grevellec A, Graham A, Tucker AS. Shh signalling restricts the expression of Gcm2 and controls the position of the developing parathyroids. Dev Biol. 2011 May 15;353(2):194-205. Epub 2011 Feb 22.
Copyright	Copyright © 2011 Elsevier Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (acc # NM_001008480.1).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

19-24

stage 21

stage 22

stage 24

Pharyngeal Arches and Clefts
Unlabeled

25-27

stage 27

Pharyngeal Arches and Clefts
Unlabeled

Entry 2

GEISHA Id	GCM2.Okabe.2004	Data Source	Publication
Complete cDNA Template Probe	show GGCCTCCAGCATGAAGCTTACCTGGGACATCAACGACCCCAAGCTGCCGCAGGAGCCCGAGCGCTTCGATGCCTTCCAG GAGTGGCCGGACGGCTACGTGCGCCTCATCTACTCCAGCGAGGAGAAGAATGCACAGCGGCACCTGAGCGGCTGGGCCA TGCGCAACACCAACAACCACAACTGCCAGATCCTGAAGAAGTCCTGCCTGGGGGTCGTGGTGTGCGCGGGGAGCTGTGC CCTGCCCGGAGGTGCCAGGCTGCAGCTGCGGCCCGCCATCTGTGACAAGGCGCGGCAGAAGCAGCAAAAGAAAGCCTGT CCAAACTGCAATGCAGCCCTCCAGCTCATCCCTTGCCGTGGGCACAGTGGCTATCCCGTCACCAACTTCTGGAGGCTGG ATGGCAAAGCAATATTTTTTCAGGCTAAAGGAGTCCACGACCACCCTAGACCAGAGAGTAAATTGGAGGCAGAGGCAAG ACGAAGTGCAATTAAGAAGCAAATGTTTTCTTCTCAGAATTCCCAGAAAAAGAGACTTCTAAACACACAGGCTGGAAGA TATCATGATAGCAGTGGTTATGTCAGTAACATGCAAAATCTGCCCTCCATAGATGTCCCAGAAAGAGTCAGCATCATCA CAGACACCAGTTTTTCAATTCCAGCTCAGTCTTACCCTTTGCCACAAAATACTGACCTCTACAAGATGCCTTATGACTC AGCCAGCTTCCAAGAGGACCAGGTGTTGCCATACCAGAAGTGCCCCAATCCTAGAATCTATGTGCCCAGGCCATGTAGT TACGAGTTTGGAGTTCCTTCCTTCATTGGCTCCAGCCCTTATTCATCATGTTATAAAGATCCAGCAAATCCTCCCCTCG ATGCCGACCCTATCAGTTTGAATGGATCTCACTATAATTCCTTGACAAGCATTGACAAGAGCTTTGACCATACTGGTAG GCATTATGGACTGAAACCAATCTGGGGGAAAACTGGCAGTGGAGACAGGAGCGACTATGGTCAGATGCAAACAAGCACT AACCACCCTTATTATGGTGGTGAGTACTCCGGCAAATATGGTCCCAGTCCTTCTCCCATGGCCCCACCACTACAGACTG TCATCACAACCACCACAAAGGTGTCCTACCAGGCCTACAAGCCATCCATGCTGAAATACAGTGAGAACCTCTGTGATAT GAAAAACCTTCAGAGCTATACACATGTGGCTGAAAATGTCTCAGGCACTATCTATTCAGGGATGAAGATTCAGGAAGAC TTTGGGATGATCAAGTCAGCATTGCTCTACCAGCATGACCCAATCACCACAAAGTCCGAACCAGGTGAGAGCGTGGAGG CCTATCGGTATGGCTTACCGCTGGGGAACAGCTATGCTGAGCATGAAGGACAAGCCTTAAGGTTTGAAAGTGCTGAATA TTGACTAAATGTTACCTAAATTCTATTGAGATTGTCAACTGGGAAATTAATGGTTGCACTAATGGTACGTTGTTTGAGA TTTGAGGAGGTGTGAGAAAGCAGTGTGTTGTTGCTTTCTGGAGCTGAATAAAGCATATTTCCCCCACCAAAAAAAAAAA AAAAAAAAAAAAAAAAAAA
Citation	Okabe M, Graham A.. The origin of the parathyroid gland. Proc Natl Acad Sci U S A. 2004 December 21; 101(51): 1771617719.
Copyright	Copyright © 2004, The National Academy of Sciences
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_001008480.1).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

19-24

stage 22

stage 24

Pharyngeal Arches and Clefts
Thyroid

31-37

stage 37

Pharyngeal Arches and Clefts
Thyroid

Entry 3

GEISHA Id	GCM2.Richardson.2011	Data Source	Publication
Complete cDNA Template Probe	show GCCTCCAGCATGAAGCTTACCTGGGACATCAACGACCCCAAGCTGCCGCAGGAGCCCGAGCGCTTCGATGCCTTCCAGG AGTGGCCGGACGGCTACGTGCGCCTCATCTACTCCAGCGAGGAGAAGAATGCACAGCGGCACCTGAGCGGCTGGGCCAT GCGCAACACCAACAACCACAACTGCCAGATCCTGAAGAAGTCCTGCCTGGGGGTCGTGGTGTGCGCGGGGAGCTGTGCC CTGCCCGGAGGTGCCAGGCTGCAGCTGCGGCCCGCCATCTGTGACAAGGCGCGGCAGAAGCAGCAAAAGAAAGCCTGTC CAAACTGCAATGCAGCCCTCCAGCTCATCCCTTGCCGTGGGCACAGTGGCTATCCCGTCACCAACTTCTGGAGGCTGGA TGGCAAAGCAATATTTTTTCAGGCTAAAGGAGTCCACGACCACCCTAGACCAGAGAGTAAATTGGAGGCAGAGGCAAGA CGAAGTGCAATTAAGAAGCAAATGTTTTCTTCTCAGAATTCCCAGAAAAAGAGACTTCTAAACACACAGGCTGGAAGAT ATCATGATAGCAGTGGTTATGTCAGTAACATGCAAAATCTGCCCTCCATAGATGTCCCAGAAAGAGTCAGCATCATCAC AGACACCAGTTTTTCAATTCCAGCTCAGTCTTACCCTTTGCCACAAAATACTGACCTCTACAAGATGCCTTATGACTCA GCCAGCTTCCAAGAGGACCAGGTGTTGCCATACCAGAAGTGCCCCAATCCTAGAATCTATGTGCCCAGGCCATGTAGTT ACGAGTTTGGAGTTCCTTCCTTCATTGGCTCCAGCCCTTATTCATCATGTTATAAAGATCCAGCAAATCCTCCCCTCGA TGCCGACCCTATCAGTTTGAATGGATCTCACTATAATTCCTTGACAAGCATTGACAAGAGCTTTGACCATACTGGTAGG CATTATGGACTGAAACCAATCTGGGGGAAAACTGGCAGTGGAGACAGGAGCGACTATGGTCAGATGCAAACAAGCACTA ACCACCCTTATTATGGTGGTGAGTACTCCGGCAAATATGGTCCCAGTCCTTCTCCCATGGCCCCACCACTACAGACTGT CATCACAACCACCACAAAGGTGTCCTACCAGGCCTACAAGCCATCCATGCTGAAATACAGTGAGAACCTCTGTGATATG AAAAACCTTCAGAGCTATACACATGTGGCTGAAAATGTCTCAGGCACTATCTATTCAGGGATGAAGATTCAGGAAGACT TTGGGATGATCAAGTCAGCATTGCTCTACCAGCATGACCCAATCACCACAAAGTCCGAACCAGGTGAGAGCGTGGAGGC CTATCGGTATGGCTTACCGCTGGGGAACAGCTATGCTGAGCATGAAGGACAAGCCTTAAGGTTTGAAAGTGCTGAATAT TGACTAAATGTTACCTAAATTCTATTGAGATTGTCAACTGGGAAATTAATGGTTGCACTAATGGTACGTTGTTTGAGAT TTGAGGAGGTGTGAGAAAGCAGTGTGTTGTTGCTTTCTGGAGCTGAATAAAGCATATTTCCCCCACCAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA
Citation	Richardson J, Shono T, Okabe M and Graham A. The presence of an embryonic opercular flap in amniotes. PLoS One. 2012; 7(9): e44903. Published online 2012 September 11.
Copyright	PLoS One. 2012; 7(9): e44903. Published online 2012 September 11.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_001008480.2).