GEISHA - A Chicken Embryo Gene Expression Database
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NR6A1
nuclear receptor subfamily 6 group A member 1

Gene
Official SymbolNR6A1
Official Full Namenuclear receptor subfamily 6 group A member 1
CGNC ID727
also known asnuclear receptor subfamily 6 group A member 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_001235477
PolypeptideXP_001235478
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human2649ENSG00000148200MIM:602778
Mouse14536ENSMUSG00000063972All phenotypic alleles (6):Targeted, knock-out(2) Targeted, other(3) Gene trapped(1) MGI:1352459
Xenopus493367, 399304487591
Zebrafish30506, 497167ENSDARG00000018030, ENSDARG00000014480ZDB-GENE-991207-19, ZDB-GENE-040724-202ZFIN:ZDB-GENE-991207-19, ZFIN:ZDB-GENE-040724-202
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene772325
Ensembl GeneENSGALG00000001073
KEGGgga:772325
GEISHA IdGCNF.Adams.2008Data SourcePublication
Complete cDNA Template Probeshow
ATGAAGCGGGACTCGACCTGCATGGAAGGTGAGGCGGGGCCGGAACGGACGGAGCGGGGCCGCCTCGCCCGGCGCCTTT
GTTCGGGGCCGCGCTGCCCGCGCTCCGCCCGGCTGTGCGCTGCGGGTCCGGTGCGGGCTGCGGGCTGCGGGCGGCCCGA
GCGCGGCGCGGCGCTTTGTTGTGCTCTCGCTGTGCTCTCGTGCTGCTCCCGCTGCTCGGCCCCTGTGATGGCGGTGCGT
GCTGGCAGTGCTGCGCGGTGTGTGAGGCCGCTGCAGGCCCAGTTCATGGCGCTGGGAGTGGAAGGGGCCCGAGGCTGGC
TGCTGGAGCCGGGTCACAGCACACGTCCCCGGGAGCGCCGCGCAGCCATTGCCGCCTCCTGGCGCCTGTGGACGCTGCG
GGCAGCTGTGCACGGCAGTAGCCCTTTCTCTTCTCTTGCAGATGACCGGGTTGATCAGCGAACCTGCCTGATCTGCGGG
GACAGAGCTACGGGTCTGCACTATGGCATCATCTCCTGCGAGGGCTGCAAGGGGTTTTTCAAAAGGAGCATTTGCAACA
AGCGGGTTTACAGATGCAGCCGAGACAAGAACTGTGTCATGTCACGCAAGCAGCGCAACAGATGCCAGTACTGCCGGCT
GCTCAAATGCCTCCAGATGGGGATGAACCGGAAAGCAATCAGAGAGGATGGCATGCCAGGAGGAAGAAACAAAAGTATT
GGACCTGTCCAGATATCGGAGGAGGAGATTGAAAGAATTATGTCCGGACAAGAATTTGAGGGAGAGGCAAACATGTCAT
GGAGCAACAATGGAGACAGCGACCACAGTTCCCCTGGAAATGGAGTTTCTGAGAGCAACCAGCCATCACCTGTGTCTAC
TCCATCTTCAAGTAGGTCCGTGGAGCTGAACGGATTCGCTGCACTCAGGGATCAATACATTGGGACACCAGTGTCCACG
CACTATCAGTACCTCCCGCACCTTTTTAGCTATTCTGCTCACTCGGCACTGGTGCCCCCCCAGGCGCGCAGCCTGGACC
CCCAGTCTCACAGCCTGATCAACCAGCTGGTGTCAGCGGAGGACCTGGAGCCGCTCGGCACGCCGATGCTCATCGAAGA
CGGGTATAAAGTGACTCAGGCAGAGCTGTTTGCATTGTTGTGTCGTCTGGCGGATGAATTGCTTTTCAGGCAGATTGCT
TGGATCAAGAAGCTGCCATTCTTCTGTGAACTCTCAATCAAGGACTATACCTGCCTGCTCAGCTCCACCTGGCAGGAGC
TGATCCTGCTTTCCTCGCTGACTGTTTACAGCAAACAGATCTTTGGTGACCTCGCAGACGTCACCTCCAAGTACTCACC
CTCTGATGATGAGCTGCACAGATTCAGTGAAGAGGGCATGGAGGTGATGGAGCGGTTGATCTACCTCTTTCGCAAATTC
AACCAGTTGAAGGTCAGCAACGAGGAGTACGCATGCATGAAAGCCATTAACTTCCTAAATCAAGACATTAGGGGTTTAA
CCAATGCATCCCAACTGGAGCAGCTGAATAAGCGGTACTGGTATGTTTGCCAGGACTTCACAGAGTACAAATACCCACA
CCAGCCAAACCGTTTTCCGGATTTAATGATGTGTTTGCCGGAGATACGATATATTGCAGGAAAGATGGTGAATGTCCCG
CTGGAGCAGCTGCCGCTCCTTTTTAAGGCCGTTCTGCATTCCTGCAAGACAAGTGTGAGCAAAGAGTGAGCCCAGCTTG
CCCCCGGCCCGTGCCTTACTCTGTGCCTCAGGCAGGGAGCGGGCTCACCTCCAGAGGATGGGGGAAACATGATCAAGGC
AGGAGGGAAGTGCTGAGACTGGCAGCGGGTGTCCCTGCCATTGTAGCAAGAGTCTTTTGTTTGTTTTTTGTTTTGTTTT
GTTTTTTTTTTTACTCTTTTTCCTTATATATTTATTTCACGACAGAGTTGAATGTATGATCTTCAACACGATGCACATG
GTTCTGTATGAATGCAGCAGATGCATTCTCCAGCAGTTTACAGAATGTGAAGATGTTTAAAGTTGCAGTGTTTGTTAGG
GTTAGTTCTTTTGTATTTTGGGGCTGGGGACTGAGATGATTAAGACTACCTCAAGGAGAAGATGCTGTTCGCACACTGC
TCTTTTCATGATTTGTATCCAGAAGTGTTTGTCATAGAATGCAAACTGCCTCACCTCATTGACAGAGCTGTCAGTATCC
CAAATGGACATTTTTGGAAAAGGGGGTGTTAGAGAAGTGCCAAGCTTTTTCTGTTTGTTTAAAACCTAAAAAAAAAACC
CTAAAAAAAAAAAAACCCTAAAAAAAAACCTTAAAGAAAAAAAGAGCTAAAAAAAGAAAAGACAGGGAGCGGAGAAGAA
GGGAAGAAGGGAAAGTCTGTCTGGCCAGTAGGTTTCCTTTCCTCCAGCAGTTTCCAGGTGCAGGTGGTATTGCCTGCGG
TTTTCTTGAATCCTGCCACCAGATCTGCAGGGCTCCCAAGCCAAGAAGGGCTCTCACCCCCATTCCCGGCTCGATCTGT
GGGATGGTGAGCTGCCCTCCTTCCCTGACCTCCCCAGCTGGGCTGCCACTGTTGCTGCAACACCTTTCTGTTTGATTGA
AACTGTGCTGTTGCAGTGTAGCAGGCTCCCAGCATGGCAGCAGTAAGGTACTCTTGCTGAGAGAGTGAGAGCTGTAAAT
AATTTCTAATTGCTTCCTTAACATCCATTTTAGGTTCATAAAAACAGGAAAAGCCTACTGAGGGAAGAGGCAGGGCTGC
CCCTTTTAGTGTATTCCCCCAAGATGTCATTGACTACTGAGGAGACTTCTGCATTGCAGCCATCAGAAGCGGCTCATTT
CTGGGAACTGCTAACTTATCCTGCAGTGAAATGCAGCCTGCATAATGGTGAGAAAGGACTCCAGGATCCTCTGGTATGG
CTTTCTCTGCTGGACTCGGGGAGTGCATGATCCATAGTTGTATCCTGCCAGGACAGTTTTATTGTTTAGTGGAATCCCT
TCTTACCAGGAAAAATTGGTATGACTACAGAACTTGGTGAGCTGTTTGTCCCAGGTGTTGCAAGGCTTGAGTTTTCCAT
CTAGCAACCTCCACACCACTTCAGTGCGTGGAGGAATGGCTTAATGAC
CitationAdams MS, Gammill LS, Bronner-Fraser M. Discovery of transcription factors and other candidate regulators of neural crest development. Dev Dyn. 2008 Apr;237(4):1021-33.
CopyrightCopyright © 2008 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_001235477).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 10
stage 11
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Crest
Neural Plate/Tube
 

Mouse

EmageMGI:1352459
EurexpressMGI:1352459
MGI GXDMGI:1352459

Frog

Xenbase487591

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-991207-19, ZDB-GENE-040724-202
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