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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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GFAP
glial fibrillary acidic protein

The human orthologue of this gene is associated
with the following human disease:

Alexander disease

Gene

Official Symbol	GFAP
Official Full Name	glial fibrillary acidic protein
CGNC ID	604
also known as	glial fibrillary acidic protein
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_418091
Polypeptide	XP_418091
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	2670	ENSG00000131095	MIM:203450	MIM:137780
Mouse	14580	ENSMUSG00000020932	All phenotypic alleles (13):Targeted, knock-out(4) Targeted, other(9)	MGI:95697
Xenopus
Zebrafish	30646	ENSDARG00000025301	ZDB-GENE-990914-3	ZFIN:ZDB-GENE-990914-3

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	419969
Ensembl Gene	ENSGALG00000000909
KEGG	gga:419969

Entry 1

GEISHA Id	GFAP.Domowicz.2008	Data Source	Publication
Complete cDNA Template Probe	show ATGGAGAGCCGTCGGTTATCCTACGGCCGCCGCTTCGGCCCCACCGGCTCTGCGTGGAGCCCCACGGAGCGGCCCCGTC CCCGCGGCGCTCACCCCGCGCCCCGCACGTCGGGCAGGATGGATTTCTCTTTGGCCAACGTGCTCAACTCGGAGTTCCG GGAGACGCGCACCAACGAGAAGGTGGAGATGATGGAGCTGAACGACCGCTTCGCCAGTTACATCGAGAAGGTGCGGCTG CTGGAGCAGCGCAATAAGGTGCTGGTGCTGGAGCTGAACCGGGCGCGGGAGCAGCAGCCGTCCCGTCTGGGTGATGTGT ACCAGGAGGAGCTGCGGGAGCTGCGGCGCCGCGTGGAGCTGCTGGGCACCGCCAAGGCGCGCGCGGAGGTGCAGAGGGA CGGCCTGGCTGAGGAGCTGGGGAGCCTGCGGGAAAAGCTGCAGCAGGAGGTCAACCTGCGGCTGGAGGCCGAGAGCACC CTGGCTGCGTACCGGCAGGACGTTGATGCTGCTGCCCTGGCTCGCCTCGACCTGGAGCGTCGTGTGGGGTCTCTGCAGG ACGAGGTGGCCTTCCTCCAGAAGGTGCACGAGGAGGAGCTGCGGGAGCTGCAGGAGCAGCTGGCCCAGCACCAGGTGCA CGTGGAGGTGGATGCCAGCAAGCCAGACCTGACGGCAGCGCTGCGCGATATCCGCACGCAGTACGAGGCCATGGCTGCC AGCAACATGCAGGAGACCGAGGAGTGGTACAAGTCCAAGTTTGCAGACCTGACGGATGCGGCTGCCCGGCACGCAGAGG CCCTACGTGCAGCCAAGCACGAGGCCAATGAGTACCGGCGGCAGCTGCAGGCCCTCACCTGCGACCTGGAGGCTCTGCG GGGCTCGAATGAGTCCCTGGAGAGGCAGCTGCGGGAGCTGGAGGAGCGCTATGCGCTGGAGACGTCCGCCTACCAGGAC ACGGTGGGGCGGCTGGAGGAGGACATCCACAGCCTCAAGGAGGAGATGGGGCGGCACCTGCAGGAATACCAGGACCTGC TCAACGTCAAGCTGGCCCTCGACATCGAGATCGCCACGTACCGCAAGCTGCTGGAGGGCGAGGAGAGCAGGATCACTGT CCCTGTGCAGAGCTTCTCCAACCTGCAGATCCGAGAGACCAGCCTGGACACCAAATCTGTGTCAGAAGCTCACGTGAAG AGAAGCATTGTGGTTAAAACAGTGGAGACGAGAGATGGAGAGGTGATCAAGGAGTCCAAGCAGGAGCACAAGGAGGTGG TGTAGGGTGTGAGAGCCACAGCCACGCTTGTAGCCATAGCTCTGTAGATCCCATCCGACGCTGCGAGGGAGCCCTGCGG TGGGGCTGGAGCCACAGGAGAAACCCACCCTCACCTCTCCCACCACCCCATGCCCCAGGGTCCCCTGTGTTGGTCCGGC CAGGACTGAGATATGGGGCATTTCTCCCCGCTTCCCACCTCCCTGGTCCAGGAGGCCACCTCGAGTGTTCCCACCATGT CCTGGGCATCCCTGGGAGGGCTGGAGGGGACACAGTACCGCATGGGCAGGGATGTTTTCCTGTTGCCGAGCAGCAGTTG GGCTTAGCCAAGAGGTGCAGGCAGGAGGAAGAGGAGGATGGAGCATAGGGGGAGGCAGGTTGATGTTGGGATGGGGAGA AGGGTGATGGAGTGGGATCTGAGCAGGGTGCCTGGGAATACAGAGTGGTTGTGGGGTTGGAGCAGCAATGGACACAGCA GGCTGGGAGTTCTTGTTGGCTTTTCCAGGGCACAGTGCCATGGGACTGTTCTGACCCTAATAGCATGCCCCCCACTAAG ATGTCTTCATCTCCAGAGATGAGGAGACATTCCAGGGGGCTCATGGGCCAAGCTCAGCTCTGCATGGGCATTCTCAAAG GGTTGGAAGAAGTCTGTTGTCCCTTGGCACCATGTGGCCCTGTCTCCTGTGCACTCTCCCAGTGCATGTCACCCACCTG GGGCCCCCGCAGACCCCATACTCACTTTGTTTTAGCCACTGACCATGAGCTAAATGTGCCCTGCTGCCACCTAACACAG CAGCACCCACTCACCAGCACTCCCCTTACCCCATTAGGTGAGCTCATAGGGTGCCACTCATGTACCACCCCACTTATCT CCACATCCCCTAGCTCAGTGCTGAGCTTTGCAGATCCTAACTCCACAGGGGCCATTCTCAGGGCAGGATGTGTTATGGG GTGATGGTGTCAAGGGTCACTTTGTCCCCCATGAGCTGGATGGAGCTTTGCAGCCATTATTGCTACTGGATTAACTCCC AAACACTGCAACACGAGATGTGAAATAAAGCCTAACACAACTGC
Citation	Domowicz MS, Sanders TA, Ragsdale CW, Schwartz NB. Aggrecan is expressed by embryonic brain glia and regulates astrocyte development. Dev Biol. 2008 Mar 1;315(1):114-24. Epub 2008 Jan 22.
Copyright	Copyright © 2008 Published by Elsevier Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # XM_418091)

Stage

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7-12

stage 11

Central Nervous System

13-18

stage 18

Central Nervous System

Entry 2

GEISHA Id	GFAP.Domowicz.2011	Data Source	Publication
Complete cDNA Template Probe	show GCACCAGGTGCACGTGGAGGTGGATGCCAGCAAGCCAGACCTGACGGCAGCGCTGCGCGATATCCGCACGCAGTACGAG GCCATGGCTGCCAGCAACATGCAGGAGACCGAGGAGTGGTACAAGTCCAAGTTTGCAGACCTGACGGATGCGGCTGCCC GGCACGCAGAGGCCCTACGTGCAGCCAAGCACGAGGCCAATGAGTACCGGCGGCAGCTGCAGGCCCTCACCTGCGACCT GGAGGCTCTGCGGGGCTCGAATGAGTCCCTGGAGAGGCAGCTGCGGGAGCTGGAGGAGCGCTATGCGCTGGAGACGTCC GCCTACCAGGACACGGTGGGGCGGCTGGAGGAGGACATCCACAGCCTCAAGGAGGAGATGGGGCGGCACCTGCAGGAAT ACCAGGACCTGCTCAACGTCAAGCTGGCCCTCGACATCGAGATCGCCACGTACCGCAAGCTGCTGGAGGGCGAGGAGAG CAGGATCACTGTCCCTGTGCAGAGCTTCTCCAACCTGCAGATCCGAGAGACC
Citation	Domowicz MS, Henry JG, Wadlington N, Navarro A, Kraig RP, Schwartz NB. Astrocyte precursor response to embryonic brain injury. Brain Res. 2011 May 10;1389:35-49. Epub 2011 Mar 9.
Copyright	Copyright © 2011, Elsevier
Comments	"Authors indicated the probe could be found in another publication (see text). The indicated probe sequence is included here."

Stage

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Location (click to highlight)

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1-3

stage 1

31-41

stage 37

stage 41

Midbrain
Ventricles

Mouse

Emage	MGI:95697
Eurexpress	MGI:95697
MGI GXD	MGI:95697

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-990914-3

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GFAPglial fibrillary acidic protein