GEISHA - A Chicken Embryo Gene Expression Database
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GFRA4
GDNF family receptor alpha 4

Gene
Official SymbolGFRA4
Official Full NameGDNF family receptor alpha 4
CGNC ID49506
also known asGDNF family receptor alpha-4|GDNF receptor alpha-4|GDNFR-alpha-4|GFR receptor alpha 4|GFR-alpha-4, GFR-alpha-4, GDNF family receptor alpha-4 precursor
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204991
PolypeptideNP_990322
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.494
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus100487002854947
Zebrafish565651, 100144564ENSDARG00000074582, ENSDARG00000056651ZDB-GENE-080402-10ZFIN:ZDB-GENE-080402-10
Gene Ontology
Molecular Functionreceptor activity
Biological Process
Cellular Componentanchored component of membrane, plasma membrane
Links to other databases
Entrez Gene395839
Ensembl Gene
KEGGgga:395839

Entry 1

GEISHA IdGFRA4.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATCGGCAGTGTATCGCAGGTAATG
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGCAATGTAGTTGGGAGTGATGGGGcDNA Template Length748
Complete cDNA Template Probeshow
CGGCAGTGTATCGCAGGTAATGGAGCCAACAAGCTGGGCCCCGACGCCAAGAACCAGTGTCGGAGCACAGTGACTGCCC
TGCTCTCCAGCCAGCTCTACGGCTGCAAGTGCAAGCGAGGCATGAAAAAGGAGAAGCATTGCTTGAGTGTCTACTGGAG
CATCCACCATACGCTGATGGAAGGCATGAACGTGCTGGAAAGTTCTCCTTATGAGCCATTCATCAGGGGCTTTGATTAT
GTCCGGCTGGCCTCCATCACTGCAGGGTCTGAGAACGAGGTGACCCAGGTGAACCGCTGCCTGGACGCCGCCAAAGCCT
GCAACGTGGACGAGATGTGCCAACGGCTGCGGACGGAATATGTCTCCTTCTGCATCCGGCGCCTGGCCCGGGCCGACAC
CTGCAACCGCTCCAAGTGCCATAAGGCCTTACGCAAGTTCTTCGACCGCGTGCCGCCCGAGTACACCCACGAGCTGCTC
TTCTGCCCCTGCGAAGACACAGCCTGTGCTGAACGCCGGCGGCAGACCATCGTTCCGGCCTGCTCCTATGAGTCCAAGG
AGAAACCCAACTGCCTGGCACCGCTGGACTCCTGCCGCGAGAACTACGTCTGTAGGTCGCGTTATGCAGAGTTCCAGTT
TAATTGCCAACCATCCCTGCAGACTGCGAGTGGCTGCCGGAGGGACAGCTATGCTGCCTGCCTGCTGGCTTACACCGGG
ATCATAGGCAGCCCCATCACTCCCAACTACATTG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Area Pellucida
Headfold
Hensen's Node
Lateral Plate Mesoderm
Paraxial Mesoderm
Primitive Streak
 
7-12
stage 7
stage 8
stage 8
stage 9
stage 10
stage 11
Area Opaca
Forebrain
Head Mesenchyme
Headfold
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites
Dorsal side.
Ventral side.
Ventral view.
13-18
stage 13
stage 14
stage 16
stage 17
Cranial Ganglion
Cranial PNS
Ear/Otic Placcode
Eye
Head Mesenchyme
Intermediate Mesoderm
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Somites
Spinal Cord
Spinal Ganglia and Nerves
Dorsal view.
19-24
stage 22
stage 23
Leg
Midbrain
Paraxial Mesoderm
Somites
Spinal Cord
Wing
 
25
stage 25
stage 25
stage 25
stage 25
stage 25
stage 25
stage 25
stage 25
Atria
Ear/Otic Placcode
Head Mesenchyme
Heart
Hindbrain
Leg Mesenchyme
Limb Buds
Midbrain
Somites
Spinal Cord
Tail
Wing Mesenchyme
 

Entry 2

GEISHA IdGFRA4.Rothermel.2004Data SourcePublication
Complete cDNA Template Probeshow
CAGGGGCTTTGATTATGTCCGGCTGGCCTCCATCACTGCAGGGTCTGAGAACGAGGTGACCCAGGTGAACCGCTGCCTG
GACGCCGCCAAAGCCTGCAACGTGGACGAGATGTGCCAACGGCTGCGGACGGAATATGTCTCCTTCTGCATCCGGCGCC
TGGCCCGGGCCGACACCTGCAACCGCTCCAAGTGCCATAAGGCCTTACGCAAGTTCTTCGACCGCGTGCCGCCCGAGTA
CACCCACGAGCTGCTCTTCTGCCCCTGCGAAGACACAGCCTGTGCTGAACGCCGGCGGCAGACCATCGTTCCGGCCTGC
TCCTATGAGTCCAAGGAGAAACCCAACTGCCTGGCACCGCTGGACTCCTGCCGCGAGAACTACGTCTGTAGGTCGCGTT
ATGCAGAGTTCCAGTTTAATTGCCAACCATCCCTGCAGACTGCGAGTGGCTGCCGGAGGGACAGCTATGCTGCCTGCCT
GCTGGCTTACACCGGGATCATAGGCAGCCCCATCACTCCCAACTACATTGACAACTCGACCTCCAGCATAGCACCCTGG
TGCACGTGCAACGCAAGTGGCAACCGGCAGGAAGAGTGCGAGAGCTT
CitationRothermel A, Volpert K, Schlichting R, Huhn J, Stotz-Reimers M, Robitzki AA, Layer PG. Spatial and temporal expression patterns of GDNF family receptor alpha4 in the developing chicken retina. Gene Expr Patterns. 2004 Jan;4(1):59-63.
CopyrightReprinted with permission from Elsevier. Copyright © 2003 Elsevier B.V. All rights reserved.
CommentsAccording to the authors, " The primers for GFRα4 are 5'-CAGGGGCTTTGATTATGTCC-3' and 5'-AAGCTCTCGCACTCTTCCTG-3', which correspond to nucleotide positions 360–379 and 940–959 (GenBank Accession Number AF045162)."
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
stage 23
stage 23
Unlabeled
 
25-30
stage 28
stage 28
Retina
Unlabeled
Ganglion Cell Layer
31-44
stage 34
stage 34
stage 34
stage 34
stage 38
stage 38
stage 40
stage 40
stage 42
stage 42
stage 44
stage 44
stage 44
Retina
Unlabeled
Ganglion Cell Layer
Hybridization using the sense GFRα4 riboprobe showed no signal.
Inner Nuclear Layer
Neuroepithelial Cells of Ciliary Marginal Zone
Ora serrata
Outer Nuclear Layer
Photoreceptors
Retinal Periphery
sense

Entry 3

GEISHA IdGFRA4.Homma.2000Data SourcePublication
Complete cDNA Template Probeshow
ATGAGGGGCATCCTCTACTTCTGCACGCTGATCCTCCTGGAAGGTATGGCAGAAGCTGTCAGCTCAAGCAGGGACTGCC
TTCAGGCAGGTGAGTCCTGCACCAACGACCCCATCTGCAGCTCCAAATTCAGGACCCTCCGGCAGTGTATCGCAGGTAA
TGGAGCCAACAAGCTGGGCCCCGACGCCAAGAACCAGTGTCGGAGCACAGTGACTGCCCTGCTCTCCAGCCAGCTCTAC
GGCTGCAAGTGCAAGCGAGGCATGAAAAAGGAGAAGCATTGCTTGAGTGTCTACTGGAGCATCCACCATACGCTGATGG
AAGGCATGAACGTGCTGGAAAGTTCTCCTTATGAGCCATTCATCAGGGGCTTTGATTATGTCCGGCTGGCCTCCATCAC
TGCAGGGTCTGAGAACGAGGTGACCCAGGTGAACCGCTGCCTGGACGCCGCCAAAGCCTGCAACGTGGACGAGATGTGC
CAACGGCTGCGGACGGAATATGTCTCCTTCTGCATCCGGCGCCTGGCCCGGGCCGACACCTGCAACCGCTCCAAGTGCC
ATAAGGCCTTACGCAAGTTCTTCGACCGCGTGCCGCCCGAGTACACCCACGAGCTGCTCTTCTGCCCCTGCGAAGACAC
AGCCTGTGCTGAACGCCGGCGGCAGACCATCGTTCCGGCCTGCTCCTATGAGTCCAAGGAGAAACCCAACTGCCTGGCA
CCGCTGGACTCCTGCCGCGAGAACTACGTCTGTAGGTCGCGTTATGCAGAGTTCCAGTTTAATTGCCAACCATCCCTGC
AGACTGCGAGTGGCTGCCGGAGGGACAGCTATGCTGCCTGCCTGCTGGCTTACACCGGGATCATAGGCAGCCCCATCAC
TCCCAACTACATTGACAACTCGACCTCCAGCATAGCACCCTGGTGCACGTGCAACGCAAGTGGCAACCGGCAGGAAGAG
TGCGAGAGCTTCCTGCACCTCTTCACTGACAACGTCTGTCTCCAAAATGCCATCCAGGCCTTTGGCAACGGGACCTACC
TGAACGCAGCCACAGCCCCATCCATCTCCCCCACCACGCAGATGTACAAGCAGGAGCGAAACGCCAACAGAGCTGCAGC
AACCCTCAGCGAGAACATCTTCGAGCACCTCCAGCCTACCAAGGTGGCTGGAGAGGAGAGGCTCCTGCGGGGCTCCACT
CGTCTGTCATCAGAGACCTCCAGCCCAGCAGCTCCTTGCCACCAGGCAGCCTCCCTGCTGCAGCTGTGGCTTCCCCCCA
CTCTTGCTGTGCTGAGCCACTTCATGATGTGA
CitationHomma S, Oppenheim RW, Yaginuma H, Kimura S. Expression pattern of GDNF, c-ret, and GFRalphas suggests novel roles for GDNF ligands during early organogenesis in the chick embryo. Dev Biol. 2000 Jan 1;217(1):121-37.
CopyrightReprinted with permission from Elsevier. Copyright © 2000 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204991).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
Hensen's Node
Notochord
Somites
 
13-18
stage 14
stage 18
stage 18
Cranial Ganglion
Dermomyotome
Ear/Otic Placcode
Somites
Spinal Cord
Splanchnic Mesoderm
Motoneurons
Ophthalmic and Maxillo-Mandibular Divisions of the Trigeminal Ganglion (V)
Ventral Lip of the Dermamyotome
Vestibuloacoustic Ganglion (VIII)

Entry 4

GEISHA IdGFRα4.Tatsumi.2007Data SourcePublication
Complete cDNA Template Probeshow
ATGAGGGGCATCCTCTACTTCTGCACGCTGATCCTCCTGGAAGGTATGGCAGAAGCTGTCAGCTCAAGCAGGGACTGCC
TTCAGGCAGGTGAGTCCTGCACCAACGACCCCATCTGCAGCTCCAAATTCAGGACCCTCCGGCAGTGTATCGCAGGTAA
TGGAGCCAACAAGCTGGGCCCCGACGCCAAGAACCAGTGTCGGAGCACAGTGACTGCCCTGCTCTCCAGCCAGCTCTAC
GGCTGCAAGTGCAAGCGAGGCATGAAAAAGGAGAAGCATTGCTTGAGTGTCTACTGGAGCATCCACCATACGCTGATGG
AAGGCATGAACGTGCTGGAAAGTTCTCCTTATGAGCCATTCATCAGGGGCTTTGATTATGTCCGGCTGGCCTCCATCAC
TGCAGGGTCTGAGAACGAGGTGACCCAGGTGAACCGCTGCCTGGACGCCGCCAAAGCCTGCAACGTGGACGAGATGTGC
CAACGGCTGCGGACGGAATATGTCTCCTTCTGCATCCGGCGCCTGGCCCGGGCCGACACCTGCAACCGCTCCAAGTGCC
ATAAGGCCTTACGCAAGTTCTTCGACCGCGTGCCGCCCGAGTACACCCACGAGCTGCTCTTCTGCCCCTGCGAAGACAC
AGCCTGTGCTGAACGCCGGCGGCAGACCATCGTTCCGGCCTGCTCCTATGAGTCCAAGGAGAAACCCAACTGCCTGGCA
CCGCTGGACTCCTGCCGCGAGAACTACGTCTGTAGGTCGCGTTATGCAGAGTTCCAGTTTAATTGCCAACCATCCCTGC
AGACTGCGAGTGGCTGCCGGAGGGACAGCTATGCTGCCTGCCTGCTGGCTTACACCGGGATCATAGGCAGCCCCATCAC
TCCCAACTACATTGACAACTCGACCTCCAGCATAGCACCCTGGTGCACGTGCAACGCAAGTGGCAACCGGCAGGAAGAG
TGCGAGAGCTTCCTGCACCTCTTCACTGACAACGTCTGTCTCCAAAATGCCATCCAGGCCTTTGGCAACGGGACCTACC
TGAACGCAGCCACAGCCCCATCCATCTCCCCCACCACGCAGATGTACAAGCAGGAGCGAAACGCCAACAGAGCTGCAGC
AACCCTCAGCGAGAACATCTTCGAGCACCTCCAGCCTACCAAGGTGGCTGGAGAGGAGAGGCTCCTGCGGGGCTCCACT
CGTCTGTCATCAGAGACCTCCAGCCCAGCAGCTCCTTGCCACCAGGCAGCCTCCCTGCTGCAGCTGTGGCTTCCCCCCA
CTCTTGCTGTGCTGAGCCACTTCATGATGTGA
CitationTatsumi N, Miki R, Katsu K, Yokouchi Y. Neurturin-GFRalpha2 signaling controls liver bud migration along the ductus venosus in the chick embryo. Dev Biol. 2007 Jul 1;307(1):14-28. Epub 2007 Apr 3.
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsAuthors said: GFRα4 (Genbank accession no. AF045162)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-22
stage 22
Somites
Spinal Ganglia and Nerves
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.494

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase854947

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-080402-10
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