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GJD2 Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol GJD2 Official Full Name gap junction protein delta 2 CGNC ID 7480 also known as Cx35.1, gap junction delta-2 protein|connexin 35.1|connexin 36|gap junction channel-forming protein|gap junction membrane channel protein alpha 9|gap junction protein, delta 2, 36kDa gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id GJD2.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer 5’-CCACCAAAGAGGCAGAACC-3’ Reverse cDNA Template Primer 5’-AATTAACCCTCACTAAAGGGCAGCTAGTTCAGTAAGTGC-3’ cDNA Template Length 621 Complete cDNA Template Probe show CCACCAAAGAGGCAGAACCAGACTGCTTAGAAGTGAAGGAGATCCCCAATCCTGCGATCAGAACTACAAAATCAAAGAT
Entry 2 GEISHA Id CX36.Berthoud.2004 Data Source Publication Complete cDNA Template Probe show AGGAAGAAAGGGGTAGGAAGAAGTGAAGAGATCCCCTCCGCTTGCCAAAGTCTTTGTCTCCGGATGAACAGCGATGGGG
Citation Berthoud VM, Singh R, Minogue PJ, Ragsdale CW, Beyer EC. Highly restricted pattern of connexin36 expression in chick somite development. Anat Embryol (Berl). 2004 Nov;209(1):11-8. Copyright © Springer-Verlag 2004 Comments The paper gives the accession number AF458098, which is now called NM_204582.1
Entry 3 GEISHA Id CX36.Hasan.2010 Data Source Publication Complete cDNA Template Probe show AGGAAGAAAGGGGTAGGAAGAAGTGAAGAGATCCCCTCCGCTTGCCAAAGTCTTTGTCTCCGGATGAACAGCGATGGGG
Citation Hasan KB, Agarwala S, Ragsdale CW. PHOX2A regulation of oculomotor complex nucleogenesis. Development. 2010 Apr;137(7):1205-13. Copyright Published by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Permission granted by Dr. Ragsdale. Comments An insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (AF458098).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 12
Midbrain
Entry 4 GEISHA Id GJD2.Anderson.2021 Data Source Direct Submission Complete cDNA Template Probe show AACATAAATACCAAGAACACAGTCTTCTCAGTGGGTCTAGAGACATAGCACTCTACTTCTTTAATGCAAGGGTATCTGT
Comments Images and probe sequence provided by Claire Anderson. Related paper: Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Entry 5 GEISHA Id GJD2.Anderson.2019 Data Source Publication Complete cDNA Template Probe show GGTTCCGCCGCGCCGCGGCACGAGCCGAGCGGGCCGGGCCGGGCTCGGCCGCCGCAGAGCCCGGAGTAGAGTCGGGCCG
Citation Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5. Copyright Copyright © 2019 Elsevier Inc. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204582 ).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 12
stage 12
Atria
Data from NCBI Unigene EST ProfileGga.96
Mouse Frog Fruit Fly Zebra Finch Zebrafish
