GEISHA - A Chicken Embryo Gene Expression Database
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TLE3
transducin like enhancer of split 3

Gene
Official SymbolTLE3
Official Full Nametransducin like enhancer of split 3
CGNC ID6155
also known astransducin-like enhancer protein 3|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_003641829
PolypeptideXP_003641877
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.53242
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene415568
Ensembl Gene
KEGGgga:415568

Entry 1

GEISHA Idpgn1c.pk019.j5Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCCCACTCCCCACCAGAGAATGGCCTGGACAAAGCCCGTGGGCTGAAGAAGGGGGATGCACCCAACAGCCCGGCCTCGG
TCGCCTCCTCCAGCAGCACTCCCTCCTCCAAGACTAAAGACTTGGGCCACAACGACAAATCATCAACGCCCGGACTCAA
GTCCAACACTCCCACACCGAGGAACGATGCCCCAACCCCAGGGACGAGCAGCACCCCGGGGCTGAGGCCGATGCCCGGC
AAGCCAAGCGGCATGGACCCACTGGCCTCAGCCCTGCGGACACCCATCTCCATCGCGGGTTCCTACGCAGCCCCGTTTG
CCATGATGGGGCACCACGAGATGAACGGCTCTCTGACCAGCCCTGGTGCCTATGCTGGCCTGCACAACATCCCCCCGCA
GATGAGTGCTGCCGCCGCCGCCGCTGCTGCCTATGGCCGGTCGCCAATGGTTGGCTTTGACCCACACCCACCCATGCGG
GCCCCTGGCCTGCCCACCAGCCTGGCATCCATCCCTGGAGGGAAGCCAGCTTACTCGTTTCACGTCAGTGCTGATGGGC
AGATGCAGCCGGTCCCCTTTCCCCACGACGCCCTGGCTGGCCCCGGCATCCCCCGGCACGCGCGGCAGATCAACACGCT
GAGCCACGGTGAGGTGGTGTGCGCCGTCACCATCAACAACCCCACCCGGCACGTGTACACAGGTGGAAAAGGCTGTGTG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 7
stage 7
stage 12
Forebrain
Lateral Plate Mesoderm
Neural Plate/Tube
 
13-18
stage 15
stage 15
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Spinal Ganglia and Nerves
 
19-22
stage 21
stage 21
stage 22
Eye
Forebrain
Hindbrain
Lateral Plate Mesoderm
Limb Buds
Midbrain
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Spinal Cord
 

Entry 2

GEISHA IdGRG2.VanHateren.2005Data SourcePublication
Complete cDNA Template Probeshow
CAGTCCAGCCTCCGTGGCGTCATCCAGCACGCGTCCCCATCGCGCACAAGGATGCGCCCACGGTGGAGAAGGCGGGGAC
ACCAGCCTCAAGTCCAGCACCCCCACATCTCAGGGCGATGCCGTAGCCCCGGGATCCAGCAGTGCCCCACAGTTCCGCC
CCTATTGCCGCCAAAGCCCCCGTGGACTCCCTGGTCCTGCCTGCTGTTCAACAAGGGACAATGGCCGGGGCGGGTGCTT
ACGCCAGCCTGCACCTCGTGTCCCCGCAAGCTCAAACGGCACCGCGGCTGCCGGCAGCTACGGGCGGTCCCCGCTGGTT
GGCTACGACCCTCACCCACACATGCGCGTGGCGGGGCTGGCGGCCGGTATGCAAGTGGGGACGTCGGGGAAACCCGCCT
ACTCCTTCCATGTCAGTGCCGACGGGCAGATGCAGCCGGTGCCGTTCCCCCCTGACGCCCTCCTGGGCTCTGGCATCCC
CCGGCACGCGCGGCAGCTGCACAGCCTGGCCCACGGCGAGGTGGTCTGCGCCGTCACCATCAGCAACTCCACGCGCCAC
GTCTACACCGGGGGCAAAGGCTGCGTCAAGGTGTGGGACGTGGGGCAGCCGGGCACCAAGACGGCCGTGGCACAGCTGG
ACTGCTTGAACCGCGACAACTACATCCGCTCCTGCAAGCTGCTCCCCGACGGCCGCAGCCTAATCGTGGGGGGGAGGCC
AGCACTCTTGTCCATTTGGGACCTGGCCGCCCC
CitationVan Hateren N, Belsham A, Randall V, Borycki AG. Expression of avian Groucho-related genes (Grgs) during embryonic development. Gene Expr Patterns. 2005 Aug;5(6):817-23.
CopyrightCopyright © 2005 Elsevier B.V. All rights reserved.
CommentsAccording to the authors, "RT-PCR was used to amplify cDNA fragments of 744 bp for Grg2 from HH stage 12 quail embryo mRNA. Primers used are the following: Grg2 forward 5′-CAAGAAGCACCAYGATGCAGAGC-3′, reverse 5′-GGNGCNGCCAGGTCCCAAATG-3′. Sequences were submitted to GenBank with the following accession number: AY834283. Sequence shown is Quail. Map shown is from chick.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Hensen's Node
Primitive Streak
Quail
4-6
stage 4
Head Process
Hensen's Node
Primitive Streak
Quail
7-12
stage 7
stage 7
stage 8
stage 11
Dermomyotome
Forebrain
Head Process
Hindbrain
Midbrain
Myotome
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites
Figure 2 includes HH stages 3, 4 and 7 and compares Grg1-5 gene expressions during gastrulation and neurulation.
Quail
Roof Plate
Ventricular Zone
13-18
stage 14
Forebrain
Hindbrain
Midbrain
Paraxial Mesoderm
Widespread Expression
Quail
19-24
stage 20
stage 20
stage 20
stage 22
stage 24
stage 24
Limb Buds
Myotome
Spinal Ganglia and Nerves
Wing
Wing Mesenchyme
Wing Muscles
DRG
Dorsal Muscle Masses
Figure 3 includes HH stages 8, 11, 14, and 20 and compares Grg gene expressions during somitogenesis.
Figure 4 include HH stages 20 and 24 and compares Grg1-5 gene expressions in the fore-limb bud.
Quail
Ventral Muscle Masses

Entry 3

GEISHA IdGRG3.VanHateren.2005Data SourcePublication
Complete cDNA Template Probeshow
CTCCATCGCGGGTTCCTACGCAGCCCCATTTGCCATGATGGGGCACCATGAGATGAATGGCTCTCTGACCAGCCCCGGT
GCCTATGCTGGCCTGCACAACATCCCCCCACAGATGAGTGCTGCAGCCGCCGCCGCCGCTGCCTATGGCCGGTCGCCAA
TGGTGAGCTTTGGAGCTGTTGGCTTTGACCCACACCCACCCATGCGGGCCCCTGGGCTGCCCACCAGCCTGGCATCCAT
CCCTGGAGGGAAGCCAGCTTACTCGTTTCATGTCAGCGCTGATGGGCAGATGCAGCCGGTCCCCTTTCCCCACAACGCC
GTGGATGGTCCCGGTATCCCCCGGCACGCGCGGCAGATCAACACGCTGAGCCATGGTAAGGTGGTGTGTGCTGTTACCA
TCAGCAACCC
CitationVan Hateren N, Belsham A, Randall V, Borycki AG. Expression of avian Groucho-related genes (Grgs) during embryonic development. Gene Expr Patterns. 2005 Aug;5(6):817-23.
CopyrightCopyright © 2005 Elsevier B.V. All rights reserved.
CommentsAccording to the authors, "RT-PCR was used to amplify cDNA fragments of 405 bp for Grg3 from HH stage 12 quail embryo mRNA. Primers used are the following: Grg3 forward 5′-CTCCATCGCGGGTTCCTACG-3′ reverse 5′-GGGTTGCTGATGGTMACMGC-3′. Sequences were submitted to GenBank with the following accession number: AY834284. Sequence shown is quail. Map shown is best match in chick.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Area Pellucida
Primitive Streak
Junctional Endoblast
Quail
4-6
stage 4
Primitive Streak
Posterior Blastoderm
Quail
7-12
stage 7
stage 7
stage 8
stage 11
Dermatome
Forebrain
Head Process
Hindbrain
Midbrain
Myotome
Neural Plate/Tube
Primitive Streak
Somites
Figure 2 includes HH stages 3, 4 and 7 and compares Grg1-5 gene expressions during gastrulation and neurulation.
Head Fold
Posterior Blastoderm
Quail
Ventral Ventricular Zone
13-18
stage 14
Forebrain
Hindbrain
Midbrain
Paraxial Mesoderm
Somites
Quail
19-24
stage 20
stage 20
stage 20
stage 22
stage 24
stage 24
Dermomyotome
Limb Buds
Neural Plate/Tube
Wing
Wing Mesenchyme
Wing Muscles
Dorsal and Ventral Muscle Masses
Figure 3 includes HH stages 8, 11, 14, and 20 and compares Grg gene expressions during somitogenesis.
Figure 4 include HH stages 20 and 24 and compares Grg1-5 gene expressions in the fore-limb bud.
Posterior
Quail

Entry 4

GEISHA IdGrg3.Houghton.2003Data SourcePublication
Complete cDNA Template Probeshow
GGTGGGCGGGGGGGACGACGCACCGTCCTCTTTCCCCCCCCCCCTCCCCGGACCCCCTCCCCCCTCCGCTCTTTGTTCC
GCCGCCGGCCCCCCCCGGCCATGTACCCGCAGGGTCGGCACCCGGCCCCCCACCAGCCGGGCCAACCGGGCTTCAAATT
CACCGTGGCCGAATCGTGCGATCGGATCAAGGACGAGTTTCAGTTCCTGCAGGCGCAGTACCACAGCCTGAAAGTGGAG
TACGACAAGCTGGCCAACGAGAAGACCGAGATGCAGCGCCATTACGTGATGTACTACGAAATGTCCTACGGGCTCAACA
TCGAGATGCACAAACAGACAGAAATTGCTAAAAGGCTGAATACCATTTTAGCACAGATTATGCCTTTTCTGTCACAAGA
GCACCAACAGCAAGTTGCACAGGCTGTTGAACGTGCCAAGCAAGTGACAATGACGGAGTTGAATGCTATCATCGGGGTA
CGTGGACTTCCCAATCTGCCTCTCACCCAGCAGCAGCTCCAGGCGCAGCACCTCTCCCACGCCGCCCATGGGCCCCCGG
TCCAGCTGCCTCCGCACCCCTCCGGCCTGCAGCCCCCCGGCATCCCACCCGTCACCGGCAGCAGTTCGGGGCTGCTGGC
GCTCGGTGCGTTGGGCAGCCAGGCACACCTGGCCGTCAAGGATGAGAAGAACCACCACGACCTGGACCACAGAGAGCGG
GACTCGAGCGCGAATAACTCCGTTTCGCCCTCGGAAAGCCTGAGAGCCAGTGAGAAGCACCGGAGCTCCACAGACTACA
GCATTGACTCCAAAAAGCGGAAAGCAGAGGAGAAGGACAGCATGAGCCGATATGACAGCGATGGTGACAAAAGCGATGA
CCTCGTCGTTGATGTCTCCAACGAGGACCCCGCCACCCCCCGGGTCAGCCCGGCCCACTCCCCACCAGAGAATGGCCTG
GACAAAGCCCGTGGGCTGAAGAAGGGGGATGCACCCAACAGCCCGGCCTCGGTCGCCTCCTCCAGCAGCACTCCCTCCT
CCAAGACTAAAGACTTGGGCCACGTATGTGCCATGCTGTGCCCTGCCACAGGGCTCTCCAAAACCCCCCTGGCAGCTGG
ACTTCACTCTTTACATTTTATTTTTTTGGTTTTTTTCTGCATCCAGAACGACAAATCATCAACGCCCGGACTCAAGTCC
AACACTCCCACACCGAGGAACGATGCCCCAACCCCAGGGACGAGCAGCACCCCGGGGCTGAGGCCGATGCCCGGCAAGC
CAAGCGGCATGGACCCACTGGCCTCAGCCCTGCGGACACCCATCTCCATCGCGGGTTCCTACGCAGCCCCGTTTGCCAT
GATGGGGCACCACGAGATGAACGGCTCTCTGACCAGCCCTGGTGCCTATGCTGGCCTGCACAACATCCCCCCGCAGATG
AGTGCTGCCGCCGCCGCCGCTGCTGCCTATGGCCGGTCGCCAATGGTTGGCTTTGACCCACACCCACCCATGCGGGCCC
CTGGCCTGCCCACCAGCCTGGCATCCATCCCTGGAGGGAAGCCAGCTTACTCGTTTCACGTCAGTGCTGATGGGCAGAT
GCAGCCGGTCCCCTTTCCCCACGACGCCCTGGCTGGCCCCGGCATCCCCCGGCACGCGCGGCAGATCAACACGCTGAGC
CATGGTGAGGTGGTGTGCGCCGTCACCATCAGCAACCCCACCCGGCACGTGTACACAGGTGGAAAAGGCTGTGTGAAGA
TCTGGGACATCAGCCAGCCTGGCAGCAAGAGCCCCATCTCTCAGCTGGACTGCCTGAACAGGGATAACTACATCCGCTC
CTGCAAGCTGCTCCCCGACGGCCGCACGCTGATCGTTGGGGGGGAGGCCAGCACGCTCACCATCTGGGACCTGGCCTCC
CCCACGCCCCGCATCAAGGCTGAGCTCACCTCCTCGGCGCCCGCCTGCTACGCGTTGGCCATCAGCCCCGACGCCAAAG
TCTGCTTCTCCTGCTGCAGCGACGGCAACATCGCCGTGTGGGACCTGCACAACCAGACCCTGGTCAGGCAATTCCAAGG
CCACACAGACGGTGCCAGCTGCATAGACATCTCACACGATGGTACGAAGCTGTGGACGGGGGGGCTGGACAACACGGTG
CGCTCCTGGGACCTGCGGGAAGGGCGGCAGCTGCAGCAGCACGACTTCACCTCCCAGATCTTCTCGCTGGGGTACTGCC
CCACGGGAGAGTGGCTGGCGGTGGGCATGGAGAGCAGCAACGTGGAAGTGCTGCACCACACCAAGCCGGACAAGTACCA
GCTGCACCTGCACGAGAGCTGCGTCCTGTCCCTCAAGTTCGCCTACTGCGGTAAATGGTTCGTGAGCACGGGGAAGGAC
AACCTGCTCAACGCATGGAGGACGCCCTACGGGGCAAGCATCTTCCAGTCCAAGGAATCCTCGTCGGTCTTAAGCTGCG
ACATTTCAGCGGATGACAAATACATCGTCACGGGCTCTGGGGACAAGAAGGCCACAGTCTACGAGGTCATCTACTGAGG
GGACGCAGTGGCGGTGCCGCAGGCTCGGCGCTGGAGCGGCGCTCGGGGCAGCACTGGGCTGGGATCTCTCGCTGGAGCT
GCACCTCCGTGCCCGCCCGGCACCCACACGGATGTACCTGGAGGTCTGCAGACATGGCACACACACACACGTCGGAGCC
CTGAACGAATTCTTGGTTTGGTTTTAGGGTTTGGGGCTGTTGGTTTTTTTTTTTTTCCCCATTTTTTTGGTCTTTTTTT
TTTTTTGGTCTCCCGGTTCTCTCCGTCTGCGCTTTGGTGGCACTCTAAAGGACTTCTTTTTTTTACCGTGACTTCTTTT
TTTTTTTCCTTTTGGTGCATCCCACATTAAGACTTGTGAAAAATGTAAATACCGGACTAGTACATAGCATGGGAAGGGT
GGGGGACCCTCCCGGTACACTAGGTGTGTATTTTCGTCTGCTGTAATTGTATTCCACTGATGGTTTTGGTGGTGGCAAT
TTTTCTTATTATTTTTCCCCCCTCCCCGCTCCCCCCCTTCCCCCCCCCCCTCTCCCAATGCATCTATTTGGGATGCAAC
CTGGACTGAGCAAAGCGTCCTCTTGGTGAAGTCGTCCCTCCCGTCGTCCCCGTGCGTTGGTGGCTGTTGTGTGTGCGGA
CGCTGTCGGGGCTGTGCTGAGCTCTGTCGGATCCCCGGCTGCTGCCGGACGTCGGCGACACAATCACCTTTTTTTATAT
GGATTTTTTTTTGTTGTGCTCGTATGTTTGAAGAGAAAAGGGGAAGCCCACGATCCGGGAATCATCCGCTCGAACCCTT
CTTGGTCTTCGGACATAAAGCAACGAGGAGTGATTTCAAAGAAAGCATAGTAAAATTCAGCTCAGGGAGCCACGAAAGA
TAATAGCAACTTAATGTGTTTTGTATTCAAATGAAAGTAAAGAATTAGAATTGATAACCTTTAAAATACAGTTTTTTTA
AAGCAAAGCTGACTAACAAGTAGGGTTTGTGTGTGGTGGGGGGACGGGGCTTGGGTAGGGTCCTGTGGCTGTATGGGCC
CGTGTCTGCTGGGCTGTAGGTCCCAATGGAGCAACCCCCCATATCCCTGCACAGGCCTGCGGTGCAGCGTTTTGTACTA
AAGGGGTTAAAAAAGGACAAGAAAACGGGAAATAAAAGTATTTGTGTAGCGGAAGCGCTCACCCTGTATTGTAGCACAC
GGAAGAGGATTTTGATACTACGTTTTTTATGGATTATTTTTTTTAATTGTTGTTTCCCCCCCCCTCCCCCCTATTGTAA
CCCAGTGGAGGACTGAGGAGGGTGATGGTGAGGATGTGGGCACCGCTGCGGCCAGCAGGGAGATGCAGTGGGGCAGAGA
GGAGCTGTGGTGGGAAATGGCCTCTCCCCCTCAGGTCGGTGCTTCTGAGCTTTTTTGGCCTTTTACTGTGCAAAACCCA
AGGGAAGAACCCAGGCTGATGGTGGCTGCCCTGCGTGGCTCCTTGGTGCGAGCCCGGATTGAGGAGCTGGGATTGATCT
GTGCGCTCATTACCCAAGGAGGAAAGGGGAGAAATGCTTTTTATGACTGCAGCAGAGGGACGGTTTGAAGGGGGGTCGG
GCTGAGCTAAAGGACTGCACAGCCCCATCCTGCAGCTCTGTGTGCTGTGCTGCCGCCCTGCAGGGCTGCACCCACGGCC
CTATGGAGCATCCTCTGCTCTGCGGCACTGGAAGGGCTCGGAGCACCCCAGGGCTGTGCCTCCAGGCTGGGCTCTGCCT
GCGTTGGTGCTTTGTTTTCCTCCAACCCCCCCTCTGTGGAACTGTGCATAGCGGAGCTGGCAGCGGGGCGCTGAGTCGG
ACCTCTCCACTTGACACCAAAGTATGTAGCAAACCTGTACAGCTGTTAATAACTACAACTGGCTTTTGTATAAAAGGGG
AGAGAGAGAGAAAAAAAAAA
CitationHoughton L, Freeman A, Morgan BA. Expression and regulation of Groucho-related genes in the embryonic chicken feather bud. Dev Dyn. 2003 Apr;226(4):587-95.
CopyrightCopyright © 2003 Wiley‐Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_025153951.1). Grg3 is also known as TLE3 in NCBI.
no images

Entry 5

GEISHA IdTle3.Zwane.2015Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GTTTTAGGGTTTGGGGCTGTTGGTTTTTTTTTTTTTCCCCATTTTTTTGGTCTTTTTTTTTTTTTGGTCTCCCGGTTCT
CTCCGTCTGCGCTTTGGTGGCACTCTAAAGGACTTCTTTTTTTTACCGTGACTTCTTTTTTTTTTTCCTTTTGGTGCAT
CCCACATTAAGACTTGTGAAAAATGTAAATACCGGACTAGTACATAGCATGGGAAGGGTGGGGGACCCTCCCGGTACAC
TAGGTGTGTATTTTCGTCTGCTGTAATTGTATTCCACTGATGGTTTTGGTGGTGGCAATTTTTCTTATTATTTTTCCCC
CCTCCCCGCTCCCCCCCTTCCCCCCCCCCCTCTCCCAATGCATCTATTTGGGATGCAACCTGGACTGAGCAAAGCGTCC
TCTTGGTGAAGTCGTCC
CitationZwane TB, Nikitina NV. Spatiotemporal expression analysis of Prdm1 and Prdm1 binding partners in early chick embryo. Gene Expr Patterns. 2015 Jan;17(1):56-68. Epub 2015 Feb 17. DOI: 10.1016/j.gep.2014.12.003.
CopyrightCopyright © 2014 Elsevier B.V.
CommentsAuthors indicated the probe for Tle3 was amplified by PCR using the following primers: 5'-GTTTTAGGGTTTGGGGCTGT-3' and 5'-GGACGACTTCACCAAGAGGA-3'. Above sequence was extracted from NCBI accession number XM_025153951.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 5
Blood Islands
Epiblast
Neural Plate/Tube
 
7-10
stage 7
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 9
stage 9
stage 9
stage 10
stage 10
stage 10
Anterior Intestinal Portal
Blood Islands
Ectoderm
Epiblast
Headfold
Neural Crest
Neural Plate/Tube
Notochord
Surface Ectoderm
double ISH, Tle3 in purple, Snail2 in brown.
stage 8-
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.53242

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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