GEISHA - A Chicken Embryo Gene Expression Database
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GATA1
GATA binding protein 1 (globin transcription factor 1)

Gene
Official SymbolGATA1
Official Full NameGATA binding protein 1 (globin transcription factor 1)
CGNC ID49811
also known asGATA-1|GATA-binding factor 1|NF-E1 DNA-binding protein|NF-E1a|eryf1|erythroid transcription factor|erythroid-specific transcription factor eryf1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205464
PolypeptideNP_990795
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.827
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Functionprotein binding, sequence-specific DNA binding, more...sequence-specific DNA binding transcription factor activity, zinc ion binding
Biological Processtranscription, DNA-templated
Cellular Componentnucleus
Links to other databases
Entrez Gene396450
Ensembl Gene
KEGGgga:396450

Entry 1

GEISHA IdGata-1.Minko.2003Data SourcePublication
Complete cDNA Template Probeshow
GAATTCCGACCGCGGTGACACACGGCTGCAGGCCCCCCCCATGGAGTTCGTGGCGCTGGGGGGGCCGGATGCGGGCTCC
CCCACTCCGTTCCCTGATGAAGCCGGAGCCTTCCTGGGGCTGGGGGGGGGCGAGAGGACGGAGGCGGGGGGGCTGCTGG
CCTCCTACCCCCCCTCAGGCCGCGTGTCCCTGGTGCCGTGGGCAGACACGGGTACTTTGGGGACCCCCCAGTGGGTGCC
GCCCGCCACCCAAATGGAGCCCCCCCACTACCTGGAGCTGCTGCAACCCCCCCGGGGCAGCCCCCCCCATCCCTCCTCC
GGGCCCCTACTGCCACTCAGCAGCGGGCCCCCACCCTGCGAGGCCCGTGAGTGCGTCAACTGCGGAGCGACGGCAACGC
CGCTGTGGCGCCGGGACGGCACCGGGCATTACCTGTGCAACGCCTGCGGGCTCTACCACCGCCTCAACGGCCAGAACCG
CCCGCTCATCCGCCCCAAAAAGCGCCTGCTGGTGAGTAAGCGCGCAGGCACAGTGTGCAGCAACTGCCAGACATCCACC
ACCACTCTGTGGCGTCGCAGCCCCATGGGGGACCCCGTCTGCAACGCCTGCGGCCTCTACTACAAACTGCACCAAGTGA
ACCGCCCCCTCACGATGCGCAAAGACGGAATCCAAACCCGAAACCGCAAAGTTTCCTCCAAGGGTAAAAAGCGGCGCCC
CCCGGGGGGGGGAAACCCCTCCGCCACCGCGGGAGGGGGCGCTCCTATGGGGGGAGGGGGGGACCCCTCTATGCCCCCC
CCGCCGCCCCCCCCGGCCGCCGCCCCCCCTCAAAGCGACGCTCTGTACGCTCTCGGCCCCGTGGTCCTTTCGGGCCATT
TTCTGCCCTTTGGAAACTCCGGAGGGTTTTTTGGGGGGGGGGCGGGGGGTTACACGGCCCCCCCGGGGCTGAGCCCGCA
GATTTGAGTTTGGGGGGGGGAAAGGGAAGGGGGGGGGGCGGATGGGATTAAATTTTTATATGTGAAATGGAGCGGAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAATTC
CitationMinko K, Bollerot K, Drevon C, Hallais MF, Jaffredo T. From mesoderm to blood islands: patterns of key molecules during yolk sac erythropoiesis. Gene Expr Patterns. 2003 Jun;3(3):261-72.
CopyrightReprinted from Gene Expression Patterns, Volume 3, Issue 3, K. Minko, K. Bollerot, C. Drevon, M.F. Hallais, and T. Jaffredo, From mesoderm to blood islands: patterns of key molecules during yolk sac erythropoiesis, Pages 261-272, Copyright 2003, with permission from Elsevier. Copyright © 2003 Elsevier B.V. All rights reserved.
CommentsThe authors said: GATA-1 was provided by Dr. Evans (Albert Einstein College of Medicine, NY). Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM 205464).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 5
stage 5
stage 5
stage 6
Area Opaca
Blood Islands
 
7-12
stage 8
stage 9
stage 9
stage 9
stage 9
stage 9
stage 9
stage 9
Blood Islands
 
13-15
stage 13
stage 13
stage 13
stage 15
stage 15
Blood Islands
 

Entry 2

GEISHA IdGata-1.Jaffredo.2005Data SourcePublication
Complete cDNA Template Probeshow
GAATTCCGACCGCGGTGACACACGGCTGCAGGCCCCCCCCATGGAGTTCGTGGCGCTGGGGGGGCCGGATGCGGGCTCC
CCCACTCCGTTCCCTGATGAAGCCGGAGCCTTCCTGGGGCTGGGGGGGGGCGAGAGGACGGAGGCGGGGGGGCTGCTGG
CCTCCTACCCCCCCTCAGGCCGCGTGTCCCTGGTGCCGTGGGCAGACACGGGTACTTTGGGGACCCCCCAGTGGGTGCC
GCCCGCCACCCAAATGGAGCCCCCCCACTACCTGGAGCTGCTGCAACCCCCCCGGGGCAGCCCCCCCCATCCCTCCTCC
GGGCCCCTACTGCCACTCAGCAGCGGGCCCCCACCCTGCGAGGCCCGTGAGTGCGTCAACTGCGGAGCGACGGCAACGC
CGCTGTGGCGCCGGGACGGCACCGGGCATTACCTGTGCAACGCCTGCGGGCTCTACCACCGCCTCAACGGCCAGAACCG
CCCGCTCATCCGCCCCAAAAAGCGCCTGCTGGTGAGTAAGCGCGCAGGCACAGTGTGCAGCAACTGCCAGACATCCACC
ACCACTCTGTGGCGTCGCAGCCCCATGGGGGACCCCGTCTGCAACGCCTGCGGCCTCTACTACAAACTGCACCAAGTGA
ACCGCCCCCTCACGATGCGCAAAGACGGAATCCAAACCCGAAACCGCAAAGTTTCCTCCAAGGGTAAAAAGCGGCGCCC
CCCGGGGGGGGGAAACCCCTCCGCCACCGCGGGAGGGGGCGCTCCTATGGGGGGAGGGGGGGACCCCTCTATGCCCCCC
CCGCCGCCCCCCCCGGCCGCCGCCCCCCCTCAAAGCGACGCTCTGTACGCTCTCGGCCCCGTGGTCCTTTCGGGCCATT
TTCTGCCCTTTGGAAACTCCGGAGGGTTTTTTGGGGGGGGGGCGGGGGGTTACACGGCCCCCCCGGGGCTGAGCCCGCA
GATTTGAGTTTGGGGGGGGGAAAGGGAAGGGGGGGGGGCGGATGGGATTAAATTTTTATATGTGAAATGGAGCGGAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAATTC
CitationJaffredo T, Bollerot K, Sugiyama D, Gautier R, Drevon C (2005). Tracing the hemangioblast during embryogenesis: developmental relationships between endothelial and hematopoietic cells. Int J Dev Biol. 2005;49(2-3):269-77.
Copyright"Reprinted from Int. J. Dev. Biol., 49,Jaffredo T, Bollerot K, Sugiyama D, Gautier R, Drevon C , Tracing the hemangioblast during embryogenesis: developmental relationships between endothelial and hematopoietic cells, 269-77, Copyright (2005), with permission from Copyright © 2005 UBC Press". All rights reserved.
CommentsGATA1 Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_205464).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
stage 9
Blood Islands
 
13-18
stage 18
Aorta
Blood
 
31-44
stage 44
stage 44
Aorta
Blood
Blood Islands
Comparison of several genes

Entry 3

GEISHA IdGATA1.Kee.2007Data SourcePublication
Complete cDNA Template Probeshow
GAATTCCGACCGCGGTGACACACGGCTGCAGGCCCCCCCCATGGAGTTCGTGGCGCTGGGGGGGCCGGATGCGGGCTCC
CCCACTCCGTTCCCTGATGAAGCCGGAGCCTTCCTGGGGCTGGGGGGGGGCGAGAGGACGGAGGCGGGGGGGCTGCTGG
CCTCCTACCCCCCCTCAGGCCGCGTGTCCCTGGTGCCGTGGGCAGACACGGGTACTTTGGGGACCCCCCAGTGGGTGCC
GCCCGCCACCCAAATGGAGCCCCCCCACTACCTGGAGCTGCTGCAACCCCCCCGGGGCAGCCCCCCCCATCCCTCCTCC
GGGCCCCTACTGCCACTCAGCAGCGGGCCCCCACCCTGCGAGGCCCGTGAGTGCGTCAACTGCGGAGCGACGGCAACGC
CGCTGTGGCGCCGGGACGGCACCGGGCATTACCTGTGCAACGCCTGCGGGCTCTACCACCGCCTCAACGGCCAGAACCG
CCCGCTCATCCGCCCCAAAAAGCGCCTGCTGGTGAGTAAGCGCGCAGGCACAGTGTGCAGCAACTGCCAGACATCCACC
ACCACTCTGTGGCGTCGCAGCCCCATGGGGGACCCCGTCTGCAACGCCTGCGGCCTCTACTACAAACTGCACCAAGTGA
ACCGCCCCCTCACGATGCGCAAAGACGGAATCCAAACCCGAAACCGCAAAGTTTCCTCCAAGGGTAAAAAGCGGCGCCC
CCCGGGGGGGGGAAACCCCTCCGCCACCGCGGGAGGGGGCGCTCCTATGGGGGGAGGGGGGGACCCCTCTATGCCCCCC
CCGCCGCCCCCCCCGGCCGCCGCCCCCCCTCAAAGCGACGCTCTGTACGCTCTCGGCCCCGTGGTCCTTTCGGGCCATT
TTCTGCCCTTTGGAAACTCCGGAGGGTTTTTTGGGGGGGGGGCGGGGGGTTACACGGCCCCCCCGGGGCTGAGCCCGCA
GATTTGAGTTTGGGGGGGGGAAAGGGAAGGGGGGGGGGCGGATGGGATTAAATTTTTATATGTGAAATGGAGCGGAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAATTC
CitationYun Kee, Byung Joon Hwang, Paul W. Sternberg, Marianne Bronner-Fraser. Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest. Genes Dev. 2007 February 15; 21(4): 391–396.
CopyrightCopyright © 2007, Cold Spring Harbor Laboratory Press
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_205464.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 9
stage 9
stage 11
Eye
Midbrain
Neural Crest
Neural Plate/Tube
Rhombomeres
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.827

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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