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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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HDAC10
histone deacetylase 10

Gene

Official Symbol	HDAC10
Official Full Name	histone deacetylase 10
CGNC ID	50586
also known as	histone deacetylase 10, HDAC10
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC

Sequence Information

Genomic
RNA	XM_415986
Polypeptide	XP_415986

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	83933	ENSG00000100429		MIM:608544
Mouse	170787	ENSMUSG00000062906	All phenotypic alleles (1):Targeted, knock-out(1)	MGI:2158340
Xenopus	100497245, 734402			5857297
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	417742
Ensembl Gene
KEGG	gga:417742

Entry 1

GEISHA Id	ChEST928i15	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show GTCCGAGCTCTCTCACATACCTCTCAGCCTGGGGTGAGTACCCCTACGCGCTTGCTGGCCCAGGGTTCGCCCCGGCCTG GCCTCAGGGCCCTTATCCGCGGCCGCAGGGACTGGGGGAGCTCCTGTACCCCCTCTTCTGCACCGCACGTCCCTCGGGT CCCGCTGAGGTCTGGAGCGTTCAGAAAAGTGCGAGATCCTCCTGCAGGCTGACGCCCTGCATACATACGTTCTCACTGG CTGTTTTATTGTACGTCTGCTCCGTACCTGAGATACGCACCGAGGGACTCCTGCTTTGTTCTGTCTGTAGCGATGGCTT CAGGAACAGCCCTGATTTACGACGAGGCAATGACCAGGCATAAGCTGCTTTGGAATGATCCTATTTGTGATATTGAAGT GCCAGAAAGACTGTCAGCCTCCTATGAGCAGCTTCAGTGTTACCATCTCGTGGAAAGATGTGTCCCTGTGCCTGCGAGA GAAGGAAGCGAGGAGGAAATCCTCTTAGTTCACAGTTCAGAACACTTGGAGGCTGCAAAAAGCACACAGACAATGAATG AAGAGGAACTGAAAAGAATCTCTGGGAATTATGATTCTTTTTTCTTTCATCCGAACACTTACCACTGTGCCAGGCTAGC TGTAGGAGCAGCTTTGCAACTAGTGGACTCTGTGATGTCAGGAAAAGTATGCAATGGAATGGCATTAGTAAGACCTCCA GGTCACCACAGTCAGAGAAACGCAGCCAATGGGTTCTGTTTGTTCAACAACGTCGCTATTGCAGCAGAATATGCCAAAC TGAAATATGGTCTACAGAGAATCCTAATTGTTGACTGGGATGTGCACCATGGGCAAGGAACTCAATATATATTTGAAGA AGATCAAAGTGTTTTGTATTTTTCCTGGCATCGCTATGAGCATCAGGAATTCTGGCCATCGCTCAAAGAATCTGAATAT GATGCTGTGGGTTTGGG

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 11

stage 12

Extraembryonic
Tail

13-18

stage 16

Extraembryonic
Tail

stage 19

Extraembryonic
Widespread Expression

Entry 2

GEISHA Id	HDAC10.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	TTATAAAAGCTTGCGGCCGCAGAATATAGAGCAGCACATAAACCCTATTGG
Reverse cDNA Template Primer	GCTCTAGAAATTAACCCTCACTAAAGGGCATTGAAGCATTTTCCAGTCC	cDNA Template Length	1024
Complete cDNA Template Probe	show TTTTAAAAAAGCTGGGCGCAGAATTAGAGCAGCACATAACCCTATGGAAATGGTGACATATGAAGACACATCATTTTTG CACAATTTGAGCACCAGATCAGACTTACCAAAGACTGCTGATACAAATCCCCTGTGCAGATGATGAAGCTAAGATAACG GACAGCAACGAAACTGACAAAATAGAAAGATTTTTGGAATTGCACATGAAAAATGTTATATTTCCAGTTCCTCCCATCA GAACAGCAACAACAGCTGAGTTGAAAGCTTCAGCGCACCTGAACACCTTCCCAGTACACCTTCATGTTGTGAAGGAAAT GGACAAAAATGAAATAGAAGCTCTTGTCAGTGATTTTCATGCAGACCTTGTGAAAACAAACAAAACTTTGCTCTCTCTG CGCAGTACATTGACCATCCTAGATAAAATACTTAAGAAAGAGGTGTGCAATGGAATTGCAGAATCACCTGCAGCTTCTG CTTCTGTTGCTGTTGCACTGAGACATCCTCTTTGTTTTGGGCTTCAAAGAGTGCTTTGCATCTTTGTTGGAGACATGCA TATCATTCCGAACACGGAAGATGGAAAAATACTTGTCATACATATTTGCAAGGAAGAACAGACTGGAAAGAGCAGCTCT AAACACTATATTGTGCTAAACTGGAAAGAGGATGCTGACGGGAATGACTTCTTTTCTGCTGTACTTGGATTCATTCTTC CTGTAGCATACAGTTACCAACCCAACTTGATAGTAATAGCTGTTGGACCAAACAGGAGCCTTGGAATAAGTGGGATTTC ACTTCTTTTTGGTTTGCTACAAGGCCTAGCAGAATCTCGAATTCTTGCAGTGATTGAGGATACAGACATAAATCTAATG CAAAGTGTAGCCAAAACACTTGCAGGTGCTTCTGTGCCCCCTTTGGAGTTCACGTGCCTCCTACCCAAGAAAAAGTAAA TCAAATAAAAATGTTAAGGAACCTCAGCGGACTGGAAATGCTTCAATGCCTTAGGGGGTAATTTTCAGAAA

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

Area Pellucida
Germinal Crescent
Head Process
Lateral Plate Mesoderm
Primitive Streak

Low level expression.
Sections pending.

7-12

stage 7

stage 8

stage 9

stage 10

stage 11

stage 12

Anterior Intestinal Portal
Lateral Plate Mesoderm
Outflow Tract
Sinus Venosus
Tail

13-18

stage 15

stage 16

stage 18

Anterior/Second Heart Field
Epicardium
Head Mesenchyme
Lateral Plate Mesoderm
Limb Buds
Neural Plate/Tube
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Tail

Sections pending.

19-24

stage 21

stage 23

stage 24

Anterior/Second Heart Field
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Leg
Limb Buds
Midbrain
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Wing

Sections pending.

Entry 3

GEISHA Id	HDAC10.Anderson.2021	Data Source	Direct Submission
Complete cDNA Template Probe	show TCGAGCGGTGCGGCTGAGGCGCTGCTCAGGCGACCTGNGTGGGGAGCGTGGCGTCCGTGCGGCGGGGCCGGCTGTGCTG CGGTGTGTTGTGCTGTGCGGGGTCGCTGAGCGCGAGCTCTCTCACATACCTGTCTCAGCCTGGGAAAAGTGCGAGATCC TCCTGCAGGCTGACGCCCTGCATACATACGTTCTCACTGGCTGTTTTATTGTACGTCTGTTCCGTACCTGAGATACGCA CCGAGGGACTCCTGCTTTGTTCTGTCTGTAGCGATGGCTTCAGGAACAGCCCTGATTTACGACGAGGCAATGACCAGGC ATAAGCTGCTTTGGAATGATCCTATTTGTGATATTGAAGTGCCAGAAAGACTGTCAGCCTCCTATGAGCAGCTTCAGTG TTACCATCTCGTGGAAAGATGTGTCCCTGTGCCTGCGAGAGAAGGAAGCGAGGAGGAAATCCTCTTAGTTCACAGTTCA GAACACTTGGAGGCTGCAAAAAGCACACAGACAATGAATGAAGAGGAACTGAAAAGAATCTCTGGGAATTATGATTCTT TTTTCTTTCATCCGAACACTTACCACTGTGCCAGGCTAGCTGTAGGAGCAGCTTTGCAACTAGTGGACTCTGTGATGTC AGGAAAAGTATGCAATGGAATGGCATTAGTAAGACCTCCAGGTCACCACAGTCAGAGAAACGCAGCCAATGGGTTCTGT TTGTTCAACAACGTCGCTATTGCAGCAGAATATGCCCAAACTGAAATATGGGTCTACAGAANAATCCTAAATTGTTTGA CTGGGGATGTTGCACCAATGGGGCAAGGGAACTTCAATAATATATTTTGAAAGAATNNTCCNAAGTTGTTTTTGNATTT TT
Comments	Images and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST759f10.