GEISHA - A Chicken Embryo Gene Expression Database
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HMGA2
high mobility group AT-hook 2

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolHMGA2
Official Full Namehigh mobility group AT-hook 2
CGNC ID49510
also known asHMGI-C, high mobility group protein HMGI-C|high mobility group protein I-C|likely candidate for the autosomal dwarf locus in the chicken
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205001
PolypeptideNP_990332
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.502
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human8091ENSG00000149948MIM:151900MIM:600698
Mouse15364ENSMUSG00000056758All phenotypic alleles (4):Spontaneous(1) Targeted, knock-out(1) Transgenic(2) MGI:101761
Xenopus100135170, 4477016258172
Zebrafish324428, 567444ENSDARG00000069912, ENSDARG00000053131ZDB-GENE-030131-3148, ZDB-GENE-060503-710ZFIN:ZDB-GENE-030131-3148, ZFIN:ZDB-GENE-060503-710
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395851
Ensembl Gene
KEGGgga:395851
GEISHA IdHMGA2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-GGAAGACCCAAGGGAAGCAA-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGGACCCAACTGCTGATGAGGT-3’cDNA Template Length225
Complete cDNA Template Probeshow
GGAAGACCCAAGGGAAGCAAAAACAAGAGTCCCTCTAAAGCAGCTCAGAAGAAAGCAGAAGCCACTGGTGAAAAGCGAC
CCCGAGGGCGGCCCAGAAAATGGCCTCAACAAGTGGTTCAAAAGAAGCCTGCTCAGGAAGAGACTGAAGAAACATCGTC
ACAAGAATCTGCAGAGGAAGACTAGGAGACCGCACCATGCAATTTCTACCTCATCAGCAGTTGGGTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Epiblast
Primitive Streak
 
7-12
stage 7
stage 9
stage 9
stage 9
stage 9
Anterior Neuropore
Ectoderm
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Crest
Neural Plate/Tube
Primitive Streak
Sinus Venosus
Somites
 
13-18
stage 13
stage 13
stage 13
stage 13
stage 17
stage 17
stage 17
stage 17
Dermomyotome
Ectoderm
Forebrain
Foregut
Head Mesenchyme
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Myelencephalon
Myotome
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Pharynx
Sclerotome
Sinus Venosus
Ventricles
Widespread Expression
 
19-24
stage 19
stage 23
stage 24
stage 24
stage 24
stage 24
Widespread Expression
 
25-26
stage 26
stage 26
stage 26
stage 26
stage 26
Widespread Expression
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.502

Mouse

EmageMGI:101761
EurexpressMGI:101761
MGI GXDMGI:101761

Frog

Xenbase6258172

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-3148, ZDB-GENE-060503-710
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