Quick Search
X XI XII XIII XIV 1 2 3 4 5 6 7 8 9 10 11 12
13 14 15 16 17 18 19 20 21 22 23 24
25 26 27 28 29 30 31 32 33 34 35 36
37 38 38 40 41 42 43 44
Gene Family QuickSearch
Human Disease Gene Search
HOXA1 Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol HOXA1 Official Full Name homeobox A1 CGNC ID 49021 also known as HOXA2, homeobox protein Hox-A1|homeo box A1|homeobox A2 gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Entrez Gene Ensembl Gene Genetic Phenotypes MOD Fruit Fly Human Mouse Xenopus Zebrafish
Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id NKX2.3.Smith.2000 Data Source Publication Complete cDNA Template Probe show GTTGCTGTCGGCGCCGGGCTAATGGAGGCAACTTAGACAGGAGCAGGCGCGCCCCTCGTCTCTCGGCGCTGCCGCTCCC
Citation Smith DM, Grasty RC, Theodosiou NA, Tabin CJ, Nascone-Yoder NM. Evolutionary relationships between the amphibian, avian, and mammalian stomachs. Evol Dev. 2000 Nov-Dec;2(6):348-59. Copyright Copyright © 2000-2011 by John Wiley & Sons, Inc., or related companies. All rights reserved.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24
stage 24
stage 24
Foregut Midgut
Entry 2 GEISHA Id HOXA1.Barak.2012 Data Source Publication Complete cDNA Template Probe show ATGAGCTCCTTCCTCGAGTACCCCGTCCTCGGCGGCGAGGCGGGGGCCTGCGCCGCCCGCTCCTACCACCCCGAGCACG
Citation Barak H, Preger-Ben Noon E, Reshef R. Comparative spatiotemporal analysis of Hox gene expression in early stages of intermediate mesoderm formation. Dev Dyn. 2012 Oct;241(10):1637-49. Copyright Copyright © 2012 Wiley Periodicals, Inc. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_003640697.1).
Entry 3 GEISHA Id HOXA1.Anderson.2021 Data Source Direct Submission Complete cDNA Template Probe show GACTTCTAGGACTTTCATCCTTTAATTTAATGTATACTTGTTCGTGTCTATGAGTTCGTTGCTTGTAAATACTTGTCCG
Comments Images and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST1010d14. Related paper: Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Entry 4 Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 12
stage 12
Heart
Entry 5 GEISHA Id HOXA1.Trevers.2023 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show ACTTTCATCCTTTAATTTAATGTATACTTGTTCGTGTCTATGAGTTCGTTGCTTGTAAATACTTGTCCGAGAGATTTAT
Comments The complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.
Data from NCBI Unigene EST ProfileGga.55802
Mouse Frog Fruit Fly Zebra Finch Zebrafish
