GEISHA - A Chicken Embryo Gene Expression Database
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HS2ST1
heparan sulfate 2-O-sulfotransferase 1

Gene
Official SymbolHS2ST1
Official Full Nameheparan sulfate 2-O-sulfotransferase 1
CGNC ID4696
also known asCHS2ST, heparan sulfate 2-O-sulfotransferase 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204481
PolypeptideNP_989812
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.9290
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly44433FBgn0024230
Human9653ENSG00000153936MIM:604844
Mouse23908ENSMUSG00000040151All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(2) Gene trapped(1) MGI:1346049
Xenopus100145562, 3990955953191
Zebrafish791188ENSDARG00000062078ZDB-GENE-070112-2312, ZDB-GENE-100304-1ZFIN:ZDB-GENE-070112-2312, ZFIN:ZDB-GENE-100304-1
Gene Ontology
Molecular Functionsulfotransferase activity
Biological Process
Cellular ComponentGolgi membrane, integral component of membrane
Links to other databases
Entrez Gene395140
Ensembl Gene
KEGGgga:395140
GEISHA IdHS2ST1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTCAGTTTGTCAGAGCACACGC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGGCAGTTTTCCCAACCTCAGTCAAGcDNA Template Length818
Forward cDNA Template Probeshow
TGGTGGTGGGCATAAACACAACAACAAAAAAATCCCACTGGCTCTGATTCTTTAACTTCTTACAATCTTCATGGTGGAA
ATGATGTTTTAACGCTAACGATTAGTCATAATTTCTTTTTAATAAAACCACAAATATAAATGTGGGCAATTCCAGCGGC
AGCAGCATTTCTCGGCAGAACATGATTAACTATCCCAATCAGCATCGTGTGACACGATTCACAAAAACAAAGCACAGAT
GTCAACCAGTTATTAACACTGCTCATATAGTATACAACCAAGATTTCCATGTTGAAAGCTGGGAAAAAATGACTTCCTC
TTCACAGAAGTATAAATGAAAATAAATTGCTCTGAAAATTAAAAAAGAGCATTAACAGAAGCATTTTTTTTTCTTTATA
TTTTCAACTAGAACNGCTGNGNGTTAATTGCNCCAAATTAAAGNGAAGATTTCCTCAGGTAAAGGGTATTAACTCCCAC
TGAAAGTATTAGTTAGATAAAAGACATGAAGCTTTTGCTTCNGGATTACCAACNCAGTTAGTCAGTATCCAACGCCCNG
GAGGTGATCCNCAGCCCACTTTTCTCGGACCTATAGAGAAACATCTTGGAGGTCTAACAAGCAATCTAGTTTCCANGGC
TGAGGACTAAGATGATGATGTGACCAAAGATTTCGGTCCGTAAATCTGAAAGTATTATGTTCTTAGTTTGATTTGGGGT
AAATCTTTTCATANAAAAAGTTTTGAGCCAGGATATACAATTCTCCATCTTTTTCCCGGACTGCGTGTGCTCTGACNAA
AACTGNAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 6
Area Opaca
Epiblast
Headfold
Neural Plate/Tube
Primitive Streak
 
7-12
stage 7
stage 8
stage 9
stage 10
stage 10
stage 10
stage 10
stage 10
stage 11
stage 12
stage 12
Anterior Intestinal Portal
Area Opaca
Blood Islands
Dermomyotome
Ear/Otic Placode
Ectoderm
Endoderm
Extraembryonic
Forebrain
Head Mesenchyme
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Crest
Neural Plate/Tube
Notochord
Primitive Streak
Sinus Venosus
Somatic Mesoderm
Somites
Spinal Cord
Splanchnic Mesoderm
extraembryonic endoderm
 
13-18
stage 17
Forebrain
Foregut
Hindbrain
Midbrain
Myotome
Notochord
Pharyngeal Arches and Clefts
Sclerotome
 
19-24
stage 19
stage 22
stage 23
Foregut
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Spinal Cord
 
25-26
stage 26
stage 26
stage 26
Foregut
Heart
Leg Mesenchyme
Liver
Lung
Mesonephros
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.9290

Mouse

EmageMGI:1346049
EurexpressMGI:1346049
MGI GXDMGI:1346049

Frog

Xenbase5953191

Fruit Fly

BDGPFBgn0024230

Zebra Finch

ZEBrAHS2ST1

Zebrafish

ZFINZDB-GENE-070112-2312, ZDB-GENE-100304-1
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