GEISHA - A Chicken Embryo Gene Expression Database
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HS3ST6
heparan sulfate-glucosamine 3-sulfotransferase 6

Gene
Official SymbolHS3ST6
Official Full Nameheparan sulfate-glucosamine 3-sulfotransferase 6
CGNC ID4032
also known asheparan sulfate glucosamine 3-O-sulfotransferase 6|heparan sulfate (glucosamine) 3-O-sulfotransferase 6
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_425243
PolypeptideXP_425243
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.29826
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human64711ENSG00000162040
Mouse328779ENSMUSG00000039628All phenotypic alleles (3):Targeted, other(3) MGI:3580487
Xenopus100489739966706
Zebrafish797517ENSDARG00000059948ZDB-GENE-090312-176ZFIN:ZDB-GENE-090312-176
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene427669
Ensembl GeneENSGALG00000005413
KEGGgga:427669
GEISHA IdHS3ST6.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCTTCCCGCAAGCCATCATC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTGTTTGTCCGTCACCACCCTCcDNA Template Length567
Forward cDNA Template Probeshow
CAGGTAGTCCTGGNAGCGGCCCATCTCCCCAGCCGGGGTCACTGACCAGCCTCTCCCCACTAACAAAGAGGAATTTGGA
GAGTGGGAAGTACTGCAGCCAGTTGTCTAGGTGCTTGGCGTAGATCCCGATCCTGACTGCGCTCCAGCTCGTGTCGATC
AGTCCCGTGCTGATGTTTTTGAAGGCCAAGTCCTGGAAGCTGGGGATGGTGGGGTTTTTGGAAAGCGT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
Hensen's Node
Unlabeled
 
7-12
stage 8
stage 9
stage 9
stage 10
stage 10
stage 11
stage 11
stage 11
stage 11
stage 11
Anterior Intestinal Portal
Ectoderm
Extraembryonic Mesoderm
Forebrain
Foregut
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesencephalon
Midbrain
Neural Plate/Tube
Notochord
Pharynx
Somatic Mesoderm
Somites
Splanchnic Mesoderm
extraembryonic ectoderm
extraembryonic endoderm
 
13-18
stage 13
stage 13
Ectoderm
Forebrain
Foregut
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesencephalon
Neural Plate/Tube
 
19-24
stage 19
stage 19
stage 19
stage 19
stage 19
stage 19
stage 20
stage 22
stage 22
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
Cranial PNS
Dermomyotome
Ear/Otic Placode
Ectoderm
Eye
Forebrain
Foregut
Head Mesenchyme
Heart
Hindbrain
Isthmus/MHB
Leg AER
Leg Mesenchyme
Midbrain
Myotome
Nasal Placode/Nerve
Nephric Ducts
Notochord
Oral Pharynx
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme
 
25-26
stage 26
stage 26
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.29826

Mouse

Emage
EurexpressMGI:3580487
MGI GXDMGI:3580487

Frog

Xenbase966706

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-090312-176
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