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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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LOC100858839
hairy/enhancer-of-split related with YRPW motif protein 2-like

Gene

Official Symbol	LOC100858839
Official Full Name	hairy/enhancer-of-split related with YRPW motif protein 2-like
CGNC ID	64268
also known as
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_003643163
Polypeptide	XP_003643211
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	100858839
Ensembl Gene
KEGG	gga:100858839

Entry 1

GEISHA Id	Hairy2.Rodrigues.2006	Data Source	Publication
Complete cDNA Template Probe	show ATGAAGCGACCTTGCGAGGAAACTACCTCAGACAGCGACATGGACGAGACCATCGATGTGGGCAGCGAGAACAACTACT GCGGGCAAAGCCATAGCTCTGTGCTTCGACCAAATTCCCCAACCACAACATCTCAGATTATGGCCAGAAAGAAAAGAAG AGGGATTATAGAGAAAAGGCGCCGGGATCGTATAAATAACAGTTTATCTGAGCTGAGGCGGCTGGTGCCAACTGCTTTT GAAAAACAAGGATCTGCCAAATTAGAAAAAGCGGAAATACTGCAAATGACGGTGGATCATCTGAAGATGCTTCAAGCGA CCGGAGGTAAAGGTTATTTTGACGCTCACTCACTGGCCATGGATTTTATGAGCATTGGCTTCCGGGAGTGCTTGACTGA AGTTGCGAGGTACCTGACATCTGTGGAAGGCCTCGACACCTCTGACCCGCTGCGTGTCAGACTGGTGTCCCATCTCAGC ACCTGCGCCTCTCAGCGGGAAGCGGCTGCCATGACCTCCTCCATGGCCCACCACCACCACCCGCTGCACCCTCACCACT GGGCAGCCGCCTTCCACCACCTCCCGGCCGCCCTGCTGCAGCCCAATGGACTCCACGCTCCCGAGGCCGCCCCATGCAG ACTCTCCTCAGAAGTGCCTCCCCACGGATCTGCACTGCTCACCGCTACCTTCGCCCACACCGACGCCGCCCTCAGGGTC CCCTCAGCGGGCAGCGTTGCTCCCTGTGTCCCCCCACTCTCTACCTCTCTCCTCTCCCTCTCGGCCACAGTTCATGCCG CAGCCGCCGCCGCCACGGCAGCCGCCCAGAGCTTCCCCCTCTCCTTCACCAGCACCTTCCCCATGCTCCCCCCAAGCGC AGCTGCTGCTGCGGTGGCGGCAGCTACAGCCATCACCCCTCCCTTGGCCGTGTCAGCCTCATCCAGCCCCCAGCAGGCT GGCAGTGGGGCAAGTGGCAAGCCCTACCGGCCTTGGGGGACGGAGGTCGGAGCCTTCTAA
Citation	Rodrigues S, Santos J, Palmeirim I. Molecular characterization of the rostral-most somites in early somitic stages of the chick embryo. Gene Expr Patterns. 2006 Oct;6(7):673-7. Epub 2006 Feb 20.
Copyright	Reprinted with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_419754.2).

Stage

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Location (click to highlight)

Comments (click to highlight)

7-10

stage 8

stage 9

stage 10

Head Mesenchyme
Neural Plate/Tube
Paraxial Mesoderm
Somites

Figure 2 includes HH stages 8-10 and compares the gene expressions of hairy1, hairy2, lunatic fringe, and hey2.
Presomitic Mesoderm

Entry 2

GEISHA Id	HEY2.Rodrigues.2006	Data Source	Publication
Complete cDNA Template Probe	show ATGAAGCGACCTTGCGAGGAAACTACCTCAGACAGCGACATGGACGAGACCATCGATGTGGGCAGCGAGAACAACTACT GCGGGCAAAGCCATAGCTCTGTGCTTCGACCAAATTCCCCAACCACAACATCTCAGATTATGGCCAGAAAGAAAAGAAG AGGGATTATAGAGAAAAGGCGCCGGGATCGTATAAATAACAGTTTATCTGAGCTGAGGCGGCTGGTGCCAACTGCTTTT GAAAAACAAGGATCTGCCAAATTAGAAAAAGCGGAAATACTGCAAATGACGGTGGATCATCTGAAGATGCTTCAAGCGA CCGGAGGTAAAGGTTATTTTGACGCTCACTCACTGGCCATGGATTTTATGAGCATTGGCTTCCGGGAGTGCTTGACTGA AGTTGCGAGGTACCTGACATCTGTGGAAGGCCTCGACACCTCTGACCCGCTGCGTGTCAGACTGGTGTCCCATCTCAGC ACCTGCGCCTCTCAGCGGGAAGCGGCTGCCATGACCTCCTCCATGGCCCACCACCACCACCCGCTGCACCCTCACCACT GGGCAGCCGCCTTCCACCACCTCCCGGCCGCCCTGCTGCAGCCCAATGGACTCCACGCTCCCGAGGCCGCCCCATGCAG ACTCTCCTCAGAAGTGCCTCCCCACGGATCTGCACTGCTCACCGCTACCTTCGCCCACACCGACGCCGCCCTCAGGGTC CCCTCAGCGGGCAGCGTTGCTCCCTGTGTCCCCCCACTCTCTACCTCTCTCCTCTCCCTCTCGGCCACAGTTCATGCCG CAGCCGCCGCCGCCACGGCAGCCGCCCAGAGCTTCCCCCTCTCCTTCACCAGCACCTTCCCCATGCTCCCCCCAAGCGC AGCTGCTGCTGCGGTGGCGGCAGCTACAGCCATCACCCCTCCCTTGGCCGTGTCAGCCTCATCCAGCCCCCAGCAGGCT GGCAGTGGGGCAAGTGGCAAGCCCTACCGGCCTTGGGGGACGGAGGTCGGAGCCTTCTAA
Citation	Rodrigues S, Santos J, Palmeirim I. Molecular characterization of the rostral-most somites in early somitic stages of the chick embryo. Gene Expr Patterns. 2006 Oct;6(7):673-7. Epub 2006 Feb 20.
Copyright	Reprinted with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_419754).