GEISHA - A Chicken Embryo Gene Expression Database
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HBA1
hemoglobin subunit alpha 1

Gene
Official SymbolHBA1
Official Full Namehemoglobin subunit alpha 1
CGNC ID
also known asHBAA, alpha-A-globin, hemoglobin subunit alpha-A|adult alpha A globin|alpha-A globin|hemoglobin alpha, subunit A|hemoglobin alpha, subunit?A|hemoglobin alpha-A chain|hemoglobin, alpha 1, Alpha-A- globin, Hemoglobin subunit alpha-A chain
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001004376
PolypeptideNP_001004376
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.34361
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human3040, 3039ENSG00000188536, ENSG00000206172MIM:141850, MIM:141800
Mouse15122All phenotypic alleles (3):Targeted, knock-out(2) Targeted, other(1) MGI:96015
Xenopus394454, 397869, 100216305, 379435973888, 478140
Zebrafish30507, 30597ENSDARG00000097011, ENSDARG00000089475ZDB-GENE-980526-79, ZDB-GENE-980526-80ZFIN:ZDB-GENE-980526-79, ZFIN:ZDB-GENE-980526-80
Gene Ontology
Molecular Functionheme binding, iron ion binding, oxygen binding, oxygen transporter activity
Biological Process
Cellular Componenthemoglobin complex
Links to other databases
Entrez Gene416652
Ensembl GeneENSGALG00000007468
KEGGgga:416652

Entry 1

GEISHA IdHb.Jaffredo.2005Data SourcePublication
Complete cDNA Template Probeshow
AGCACGGGTGCAACCATGGTGCTGTCCGCTGCTGACAAGAACAACGTCAAGGGCATCTTCACCAAAATCGCCGGCCATG
CTGAGGAGTATGGCGCCGAGACCCTGGAAAGGATGTTCACCACCTACCCCCCAACCAAGACCTACTTCCCCCACTTCGA
TCTGTCACACGGCTCCGCTCAGATCAAGGGGCACGGCAAGAAGGTAGTGGCTGCCTTGATCGAGGCTGCCAACCACATT
GATGACATCGCCGGCACCCTCTCCAAGCTCAGCGACCTCCATGCCCACAAGCTCCGCGTGGACCCTGTCAACTTCAAAC
TCCTGGGCCAATGCTTCCTGGTGGTGGTGGCCATCCACCACCCTGCTGCCCTGACCCCGGAGGTCCATGCTTCCCTGGA
CAAGTTCTTGTGCGCCGTGGGCACTGTGCTGACCGCCAAGTACCGTTAAGACGGCACGGTGGCTAGAGCTGGGGCCAAC
CCATCGCCAGCCCTCCGACAGCGAGCAGCCAAATGAGATGAAATAAAATCTGTTGCATTTGTGCTCC
CitationJaffredo T, Bollerot K, Sugiyama D, Gautier R, Drevon C (2005). Tracing the hemangioblast during embryogenesis: developmental relationships between endothelial and hematopoietic cells. Int J Dev Biol. 2005;49(2-3):269-77.
Copyright"Reprinted from Int. J. Dev. Biol., 49,Jaffredo T, Bollerot K, Sugiyama D, Gautier R, Drevon C , Tracing the hemangioblast during embryogenesis: developmental relationships between endothelial and hematopoietic cells, 269-77, Copyright (2005), with permission from Copyright © 2005 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #NM_001004376.) Which hemoglobin wasn't specified in the paper. This sequence is Hemoglobin A.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
Blood
 
31-44
stage 44
Blood
Blood Islands
Comparison with other genes

Entry 2

GEISHA IdHBAA.Anderson.2021Data SourceDirect Submission
Complete cDNA Template Probeshow
GCCAACACAGAGGTGCAACCATGGTGCTGTCCGCTGCTGACAAGAACAACGTCAAGGGCATCTTCACCAAAATCGCCGG
CCATGCTGAGGAGTATGGCGCCGAGACCCTGGAAAGGATGTTCACCACCTACCCCCCAACCAAGACCTACTTCCCCCAC
TTCGATCTGTCACACGGCTCCGCTCAGATCAAGGGGCACGGCAAGAAGGTAGTGGCTGCCTTGATCGAGGCTGCCAACC
ACATTGATGACATCGCCGGCACCCTCTCCAAGCTCAGCGACCTCCATGCCCACAAGCTCCGCGTGGACCCTGTCAACTT
CAAACTCCTGGGCCAATGCTTCCTGGTGGTGGTGGCCATCCACCACCCTGCTGCCCTGACCCCGGAGGTCCATGCTTCC
CTGGACAAGTTCTTGTGCGCCGTGGGCACTGTGCTGACCGCCAAGTACCGTTAAGACGGCACGGTGGCTAGAGCTGGGG
CCAACCCATCGCCAGCCCTCCGACAGCGAGCAGCCAAATGAGATGAAATAAAATCTGTTGCATTTGTGCTCCA
CommentsImages and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST973g24. Related paper: Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Aorta
Blood
Blood Islands
 

Entry 3

GEISHA IdHBAA.Anderson.2019Data SourcePublication
Complete cDNA Template Probeshow
CCAACACAGAGGTGCAACCATGGTGCTGTCCGCTGCTGACAAGAACAACGTCAAGGGCATCTTCACCAAAATCGCCGGC
CATGCTGAGGAGTATGGCGCCGAGACCCTGGAAAGGATGTTCACCACCTACCCCCCAACCAAGACCTACTTCCCCCACT
TCGATCTGTCACACGGCTCCGCTCAGATCAAGGGGCACGGCAAGAAGGTAGTGGCTGCCTTGATCGAGGCTGCCAACCA
CATTGATGACATCGCCGGCACCCTCTCCAAGCTCAGCGACCTCCATGCCCACAAGCTCCGCGTGGACCCTGTCAACTTC
AAACTCCTGGGCCAATGCTTCCTGGTGGTGGTGGCCATCCACCACCCTGCTGCCCTGACCCCGGAGGTCCATGCTTCCC
TGGACAAGTTCTTGTGCGCCGTGGGCACTGTGCTGACCGCCAAGTACCGTTAAGACGGCACGGTGGCTAGAGCTGGGGC
CAACCCATCGCCAGCCCTCCGACAGCGAGCAGCCAAATGAGATGAAATAAAATCTGT
CitationAnderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
CopyrightCopyright © 2019 Elsevier Inc. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
stage 12
Heart
Proepicardium
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.34361

Mouse

EmageMGI:96015
EurexpressMGI:96015
MGI GXDMGI:96015

Frog

Xenbase973888, 478140

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-980526-79, ZDB-GENE-980526-80
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