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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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HOXB6
homeobox B6

Gene

Official Symbol	HOXB6
Official Full Name	homeobox B6
CGNC ID	59035
also known as	GHOX-2.2, homeobox protein Hox-B6\|Homeobox protein Hox-2.2\|Homeobox protein Hox-B6\|homeobox protein Hox-B6-like
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_001236989
Polypeptide	XP_001236990
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	777548
Ensembl Gene
KEGG	gga:777548

Entry 1

GEISHA Id	Hoxb-6.Gaunt.1996	Data Source	Publication
Complete cDNA Template Probe	show `AGACGTACACCCGTTACCAAACCCTGGAGCTGGAGAAGGAATTCCACTTCAACCGCTACCTGACCCGGCGCCGGCGGAT CGAGATCGCCCACTCGCTCTGTCTGACGGAACGGCAGATCAAGATCTGGTTCCAGAACCGTCGGATGAAGTGGAAAAAA GAGAACAAACTGCTCAGCTCCTCGCAGCTGAGCGCGGAGGAGGAGGAGAAAACGGCGGAGTGAAAGGAGCGTTTAAAAA GAAAGGAGAGAGGGAGTGAGTGGGTGCGTGTGAGAGCCAGGAGGATGAGGGTGGTGTGGGCTGGCTG`
Citation	Gaunt SJ, Strachan L. Temporal colinearity in expression of anterior Hox genes in developing chick embryos. Dev Dyn. 1996 Nov;207(3):270-80.
Copyright	Copyright © 1996 Wiley‐Liss, Inc.
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Gaunt et al. 1996.

Stage

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7-12

stage 12

Lateral Plate Mesoderm
Neural Plate/Tube
Somites

25-30

stage 26

Somites

31-44

stage 44

Entry 2

GEISHA Id	Hoxb6.Bel-Vialar.2002	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show CTCTGAGCGCGCCGGGAACGCTTCTTTCCGCAGATATTATATATTTGGTTAAGGGGGTGCATTTCTGCTGTTTAAAAGG GAGGGAAAAGGGGGTGGATGGTTTGTTCTTGGGGTCCCTGGTGCAATCTCAGCTCCTCATGGGTGCTATTTTGCAACCT CAGGCGCCTGCTATTGGTCAGCCCATGATCAGATGGTTGTATTTCCTTGTGTCCCTCGCTGGCACCACGCCATCTCCCT TCAGCTAAAACCCAATCTCCGATATACTACTAATAGCTAAACCACTTGGACTATAAAACACAACAAATCATAAAGCCGG GAAAGGACGGCAGGCTCCTTCCAATGAGTTCTTATTTTGTCAACTCGACCTTCCCGGTGAGTCTGGCGGCGGGGCAGGA GCCCTTCCTGGGACAGATCCCGTTATATCCCTCGGGCTATGCGGATCCTTTGAGGCACTACCCCAGCACCTATGGAGCC ACGGGAGTCCAGGAGAAGGGCTATGCCTCCTCTCCCTACTACCAGCAAAGCAACGGAGCCTACAGCCGCAGCTCCGCCT GTGACTATGGGGCCGGCGGCTTTTTCAGGGAGAAGGACCCTGCGTGCCCCCCCCCCAACCTGGACGAGGTCCCCTTCGC CCCCGAGCCGCGCAAGTCGGACTGCGCGCAGAGCAAAACTGTGTTCGGAGAGAGCGAGGAGCAAAAGTGTTCCGCCCCG GTTTACCCCTGGATGCAGCGGATGAACTCTTGCAATAGTGTCACAGGTTCCTCCTTCGGGCCCAGCGGCCGCAGAGGCC GTCAGACGTACACCCGTTACCAAACCCTGGAGCTGGAGAAGGAATTCCACTTCAACCGCTACCTGACCCGGCGCCGGCG GATCGAGATCGCCCACTCGCTCTGTCTGACGGAACGGCAGATCAAGATCTGGTTCCAGAACCGTCGGATGAAGTGGAAA AAAGAGAACAAACTGCTCAGCTCCTCGCAGCTGAGCGCGGAGGAGGAGGAGGAGAAAACGGCGGAGTGAAAGGAGCGTT TAAAAAGAAAGGAGAGAGGGAGTGAGTGGGTGCGTGTGAGAGCCAGGAGGATGAGGGTGGTGTGGGCTGGCTGCGAGGA AGGGAAAACGCGCACATTGGTGGGACGAGAGCTCTGCGGAGACGGCGACAGCAACAGAAAAGTTTGGGCCACCAATGCC ATGGACTCGTGTTCCCAATATCTGTCGTGTCCAGAACAAAAAAATCAGGCTTCTAGTTGCGTTTTTTTTTCTTCCTAGA CTTCCCTCCCCATCCAACCCCCCCCCCTTTTCCCCCCATCCCCTAT
Citation	Sophie Bel-Vialar, Nobue Itasaki, Robb Krumlauf. Initiating Hox gene expression: in the early chick neural tube differential sensitivity to FGF and RA signaling subdivides the HoxB genes in two distinct groups. Development 2002 Nov;129(22):5103-15.
Copyright	Copyright © The Company of Biologists Limited 2002.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession number XM_025144000.1).