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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
	Multiple Parameters

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IRF6
interferon regulatory factor 6

The human orthologue of this gene is associated
with the following human diseases:

Gene

Official Symbol	IRF6
Official Full Name	interferon regulatory factor 6
CGNC ID	51111
also known as	interferon regulatory factor 6, Interferon regulatory factor 6
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	XM_417990
Polypeptide	XP_417990

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	3664	ENSG00000117595	MIM:608864	MIM:607199
Mouse	54139	ENSMUSG00000026638	All phenotypic alleles (5):Chemically induced(1) Targeted, other(3) Gene trapped(1)	MGI:1859211
Xenopus	594951, 397715			5910330
Zebrafish	393570	ENSDARG00000043296	ZDB-GENE-040426-1137	ZFIN:ZDB-GENE-040426-1137

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	419863
Ensembl Gene	ENSGALG00000001405
KEGG	gga:419863

GEISHA Id	Irf6.Knight.2006	Data Source	Publication
Complete cDNA Template Probe	show ATGGCGTTACACCCGCGCAGGGTGCGCCTGAAGCCGTGGCTCGTGGCCCAGGTGGACAGCGGGATGTACCCCGGCCTCA TCTGGCTGAACCGAGAAGCCAAGCGGTTCCAGATCCCCTGGAAGCACGCAACCCGGCACAGCCCTCAGCACGAGGAGGA GAACACCATCTTCAAGGCATGGGCTGTGGAAACAGGGAAGTACCAGGAAGGAGTCGACGAGCCAGACCCTGCAAAATGG AAAGCGCAGCTCCGATGTGCTCTTAACAAAAGCCGGGAGTTTAATCTGATGTATGATGGCACCCAGGAGGTGCCCATGA ATCCCGTGAAAATTTATGAAGTGTGCGATATCNNNNNNNNNNNNNNNTCAATCATTAATCCAGGGTCCACTGGCTCAGC TCCATGGGATGAGAAGGAGAATGATCTTGATGAGGATGAAGAGGAAGAACTGAATCCATCTCAGCATGTCCCTATTCAA GAGACATTTCCATTTCTTAATATCAATGATTCTCCGATGGCTCCAGCCAGTGCAGAGAACTGCAGCCCTGAAGCTGTGT GGCCGAAGAATGAACCTCTGGATATGGAGATGCCTCCGACTGCTCTGCAACATGACTTCTTCAGCAGCCCGGAGCTCTG GATCAGCTCTCTTCCAATGACAGACCTAGAAATCAAGTTTGAATATCGAGGAAAGGAGACTGGGCAGACGACAACTGTG AGCAACCCGCAGGGATGCAGACTGTTCTACGGAGAGCTGGGTCCTATGCCAGACCAGGAGGAGCTCTTTGGGCCAATTA ATTTGGAGCAAGTAAGGTTTCCAGGAACAGAGCAAATCACCAACGAAAAGCAAAAGATCTTCACCAGTCGGCTGCTGGA TGTTATGGACAGGGGACTGATCCTGGAGGTCAGTGGCCATGCCATCTACGCTGTGCGGCTCTGCCAGTGCAAGGTGTAC TGGTCTGGTCCCTGTGCACCTTCTGCCACTACACCAAATTTGATTGAGAGGCAAAAGAAAGTCAAACTCTTCTGTTTGG AAACGTTTCTAAGTGAGCTGATTGCCCACCAGAAAGGACAAATTGAGAAACAGCCACCATTTGAAATCTATTTCTGTTT TGGGGAAGAGTGGCCTGATGGAAAACCTCGGGAGAGAAAGCTGATCGTGGTTCAGGTCATCCCTGTTGTGGCTCGGATG ATATATGAGATGTTTTCCGGTGACTTCACGCGCTCCTTTGACAGCGGCAGTGTGCGGCTCCAGATCTCTACTCCTGACA TCAAGGACAACATCGTGGCTCACCTGAAGCAGCTGTACCGCCTGTTGCAGACCCACCAGGAGGGGTGGCCGATGCAGGC CCCCACCATGCACATGGCACAGCCACTGCCTGCGCAGTGACAGGCCTCCTGTGCTGTTCCCTCCCCTGTGTGTGTATAT AAGAAAACTCTGACAAGTGAAAATCTGTAAATCTGGTTTTCTGATTGAATTTCCACAGTCTCATGGTACTTTTGTTTGG GGAGTGTTATAAATAAAGGGAATAAGGAATGCTTCTAGCTCCATCACTGTTTTTAGCTGCTTGCTTAACCCACCGCTAT GTATAAATCAGATTTTTAATTCTGTAATATTTTTTAAACCAAATACTGACATCCTGTATATAAACACTTGATCAGGAGA GAGTAAAAATTAATCTGTACTCTATTAAATTTGTCTTAACGTTA
Citation	Knight AS, Schutte BC, Jiang R, Dixon MJ. Developmental expression analysis of the mouse and chick orthologues of IRF6: the gene mutated in Van der Woude syndrome. Dev Dyn. 2006 May;235(5):1441-7.
Copyright	Copyright © 2006 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_417990).