GEISHA - A Chicken Embryo Gene Expression Database
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JUN
Jun proto-oncogene, AP-1 transcription factor subunit

Gene
Official SymbolJUN
Official Full NameJun proto-oncogene, AP-1 transcription factor subunit
CGNC ID52234
also known astranscription factor AP-1|jun oncogene|proto-oncogene c-jun|v-jun sarcoma virus 17 oncogene
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001031289
PolypeptideNP_001026460
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.1473
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly36057FBgn0001291
Human3725ENSG00000177606MIM:165160
Mouse16476ENSMUSG00000052684All phenotypic alleles (11):Targeted, knock-out(3) Targeted, other(8) MGI:96646
Xenopus100493911, 399400482227
Zebrafish335916ENSDARG00000043531ZDB-GENE-030131-7859ZFIN:ZDB-GENE-030131-7859
Gene Ontology
Molecular Functionsequence-specific DNA binding, sequence-specific DNA binding transcription factor activity
Biological Processactivation of MAPK activity involved in innate immune response, innate immune response, more...MyD88-dependent toll-like receptor signaling pathway, toll-like receptor 15 signaling pathway, toll-like receptor 21 signaling pathway, toll-like receptor 2 signaling pathway, toll-like receptor 3 signaling pathway, toll-like receptor 4 signaling pathway, toll-like receptor 5 signaling pathway, toll-like receptor 7 signaling pathway, toll-like receptor signaling pathway, transcription, DNA-templated
Cellular Componentnucleus
Links to other databases
Entrez Gene424673
Ensembl Gene
KEGGgga:424673

Entry 1

GEISHA IdJUN.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCGCTGAACCTGTCCGACGCG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGATGCGCTTTCGAGCACGCAGcDNA Template Length957
Forward cDNA Template Probeshow
NNAACCATACAGAGGATAGCCTCTACTTCACGTCGCTTTACGCGTCCGCCGCTTTTGGTTTGTTGTTTGGTTATACCAC
AACATCACAGTTCCTATTTAAGTCCGTCTCTTCAAAACGTTTGCAACTGTTGTGTTAGCATTAGCTGGCACCCGCTGTT
GACATGGTTCATGACCTTCTGCTTAAGCTGTGCAACCTGTTCTCTGAGCATGTTGGCCGTGGATGCCAGCTCTGAGTTC
TGGGCTTTCAAAGTTTTCACTTTTTCTTCCAACCTGGCAATCCTTTCCAACTTCCTTTTCCGGCATTTGGACGCCGCAA
TTCTGTTTCTCATGCGTTTTCTCTCGGCTTTGATTCTCTCCTGCGACTCCATGTCAATAGGGGACAGGGGAGGGGTTTC
CCCCGGCATTTCAGGTACAGTCTGAGGCTCTTCTTTCAGAGCCTGAAGCCTGGGATGCTGCACGGGCATCTGGGGGTTT
ATGTGATGCTGCGGCGCGTAGCCCATGCCGTTGGCGTTGTACTTGGGTGCGGAGTTGAGCGCGTTGGGGTTGAAATTGC
TGAGATTGGCATACACCGGGGGCTCGCTGTGCAAACTCTTGTTGAAGCTGCCGCCGCCGGCCATGGAAGACACAGGTGC
CATGCCGCCGCTAACAGGTTGTGCGGCTGAAGTGACACTGGGCAGCGTGTTCTGGTTGTGCAATTCCGCCAGCGCTCTC
ACGAAGCCTTCGGCGAACCCCTCTTGCTCGTCGGTAACGTTCTTGGGGCAGAGGAACTGCTTCCGGGTCGGCGTGATGG
TCATTAACCCGTTGCTGGACTGGATGATGAGCCCCTCCAGCTCCGGGGAAGCCAGCTTCAACAGCCCCACTTCAGGGGA
AGTGAAGATGTCGGCGTTCTTGTTTCTCAGGTGCGGCTTCAGGCTGCTGGCCGCGTCAATAAGGNTCAGCGAANNNNNN
ACCGGTTNNTCACCCCCACTACAAACACCCCTAACTCCATTTCTCCTTCCCCCAAAAACGTTACCAGAAACTAAAAAGG
CTTCCCCAAAAGCTTCTTTATACCTCGGGTGAATTTACAAACCACAAACTTTCCCTCCCCACCCTTCCCAAACTTAAAG
GGGGTTCGCTCCGTTATCCCTGTGGGCGGGGGGGCCTTACACAATATCCACCACCCCTCTTTTACTCCCCTATCTCCCC
CGCCCCCCCCCCCAAATTACCCCGCGGTGGGCTCTCCCCCCCCCCCTCCCACGGGGACCCTCACTCCTCTCTGTCGTGA
ATATACATAATCTAAGAAGGACACCCCCTCCCCCCTCTTCTCCGCGGGAGGTGAGAACAAAAAAATAACAACAATTCTT
CTCCTTCTACAAGGTCGAAGGTAGCATGTCGCGTAAGAAAGAATAAAACACAATATACAGCTCCACACATTAAAACCAT
CAATACAGTCACCACGCGCACGCCTAGCACACATATATGTATTTATAGTATTTAACACCAACCAACACCAACGTAGTTA
CTCTTTTTATATTTANNNNNNAGATNNNCNTCCCTCGTCTCACACTCATCTTCCG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Area Pellucida
Blood Vessels
Germinal Crescent
Lateral Plate Mesoderm
Neural Plate/Tube
 
7-12
stage 7
stage 8
stage 10
stage 11
Amnion
Anterior Intestinal Portal
Blood Vessels
Headfold
Lateral Plate Mesoderm
Sinus Venosus
 
13-18
stage 17
Foregut
Liver
Nephric Ducts
Somites
 
19-24
stage 21
stage 23
Anterior/Second Heart Field
Eye
Face Mesenchyme
Forebrain
Leg Mesenchyme
Nephric Tubules
Outflow Tract
Somatic Mesoderm
Somites
Wing Mesenchyme
Over-stained?
25-26
stage 26
stage 26
stage 26
Anterior/Second Heart Field
Eye
Face Mesenchyme
Forebrain
Leg Mesenchyme
Nephric Ducts
Nephric Tubules
Outflow Tract
Somatic Mesoderm
Somites
Wing Mesenchyme
 

Entry 2

GEISHA Idc-Jun.Singh.2016Data SourcePublication
Complete cDNA Template Probeshow
TGCGACTCAGCCGCCGGAGCGGGCTCTGTTCTATGAGTGCAAAGATGGAGCCTACTTTCTACGAGGATGCCCTGAACGC
CAGCTTCGCGCCGCCGGAGAGCGGCGGCTATGGATATAATAACGCCAAGGTGCTGAAGCAGAGCATGACGCTGAACCTG
TCCGACCCGGCCAGCAGCCTGAAGCCGCACCTGAGGAACAAGAACGCCGACATCCTCACCTCCCCCGACGTGGGGCTGC
TGAAGCTGGCCTCCCCGGAGCTGGAGCGGCTCATCATCCAGTCCAGCAACGGGTTAATCACCACCACGCCGACCCCGAC
GCAGTTCCTCTGCCCCAAGAACGTTACCGACGAGCAAGAGGGGTTCGCCGAAGGCTTCGTGAGAGCGCTGGCGGAACTG
CACAACCAGAACACGCTGCCCAGCGTCACCTCAGCCGCACAACCTGTTAGCGGCGGCATGGCACCTGTGTCCTCCATGG
CCGGCGGCGGCAGCTTCAACACGAGTTTGCACAGCGAGCCCCCGGTGTATGCCAATCTCAGCAACTTCAACCCCAACGC
GCTCAACTCCGCACCCAACTACAACGCCAACGGCATGGGCTACGCGCCGCAGCATCACATAAACCCCCAGATG
CitationSingh PN, Ray A, Azad K, Bandyopadhyay A. A comprehensive mRNA expression analysis of developing chicken articular cartilage. Gene Expr Patterns. 2016 Jan;20(1):22-31.
CopyrightCopyright © 2015 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_001031289).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 28
Limb Buds
 
31-38
stage 31
stage 34
stage 36
stage 38
Limb Buds
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.1473

Mouse

EmageMGI:96646
EurexpressMGI:96646
MGI GXDMGI:96646

Frog

Xenbase482227

Fruit Fly

BDGPFBgn0001291

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-7859
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