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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
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KDM7A
lysine demethylase 7A

Gene

Official Symbol	KDM7A
Official Full Name	lysine demethylase 7A
BirdBase ID	BB-GG6188
CGNC ID	9733
also known as	JHDM1D, lysine-specific demethylase 7A\|jumonji C domain containing histone demethylase 1 homolog D\|lysine (K)-specific demethylase 7A
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_416344
Polypeptide	XP_416344
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	80853	ENSG00000006459
Mouse	338523	ENSMUSG00000042599	All phenotypic alleles (2):Targeted, other(2)	MGI:2443388
Xenopus	780121, 444005			5900919
Zebrafish	503902, 321248	ENSDARG00000018559, ENSDARG00000018111	ZDB-GENE-050309-32, ZDB-GENE-030131-9829	ZFIN:ZDB-GENE-050309-32, ZFIN:ZDB-GENE-030131-9829

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	418110
Ensembl Gene	ENSGALG00000012848
KEGG	gga:418110

GEISHA Id	KDM7A.Huang.2010	Data Source	Publication
Complete cDNA Template Probe	show `CCACCCCCTATCAGCAACCAGGCGACAAAAGGCAAACGTCCAAAGAAAGGAATGGCAACTGCTAAACAGCGCCTTGGGA AGATCTTGAAGCTGAACCGCAATGGCCATGCACGCTTCTTTGTTTAATGTAGCTGCTACTTCTACTACTGCTGTCTTTC CTATACAGACGAGTATTGAGGTTGACAGAGCCTGG`
Citation	Huang C, Chen J, Zhang T, Zhu Q, Xiang Y, Chen CD, Jing N. The dual histone demethylase KDM7A promotes neural induction in early chick embryos. Dev Dyn. 2010 Dec;239(12):3350-7.
Copyright	Dev. Dyn Copyright © 2010 John Wiley & Sons, Inc. All Rights Reserved.
Comments	The probe for KDM7A was amplified by PCR using the following primers: 5'-CCACCCCCTATCAGCAACC-3' and 5'-CCAGGCTCTGTCAACC-TCAA TAC-3'and was extracted from NCBI acc. # XM_416344.2.

Stage

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Comments (click to highlight)

1-3

stage 2

stage 2

stage 3

Primitive Streak

4-6

stage 4

stage 6

Neural Plate/Tube
Primitive Streak

Mouse

Emage
Eurexpress	MGI:2443388
MGI GXD	MGI:2443388

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-050309-32, ZDB-GENE-030131-9829

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