GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

KLF-4
Kruppel-like factor 1 (erythroid)

Gene
Official SymbolKLF-4
Official Full NameKruppel-like factor 1 (erythroid)
CGNC ID52220
also known asKLF1, Krueppel-like factor 1|Krueppel-like factor 2, Krueppel-like factor 1, EKLF, KLF1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_422416
PolypeptideXP_422416
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.48902
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424577
Ensembl Gene
KEGGgga:424577

Entry 1

GEISHA Idpgp1n.pk003.f7Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
CGCAGCCATGCTGTTAACAGCTTAGGGGCGCGGGGCGGCGCAGAGCAGCGCTGCCGCCGCGGGGAGCGGAACGGAGCGG
AGCGGAGCCGGGCCCCGCGCTCCCCCCCCCCAGCCCCGTGCCCGGTCCCGGCTCCGCCATGGCGGCGGCCGTGGACGAG
AGCGCGCTGCCCTCCATCTCCACCTTCACCAACCTGTTGCCGCTGGAGGAGCGGCCCCCCGACATGATGCACAGGATGC
TGCAACACGACGGCTCCGCCGCTGCCGTGAAGCGGGAGGAGGACGAGTTGGGCAAATTCGTGGATTTGGACTTCATCCT
GGCGCACACCAGCAGCGGCGGGCAGGGACCGCCCGGCCCCAATTACCCTCTGCCTGAGACCCCCGAGAGCTGCGGCACC
ACGTACGACAGCGACGGCTCCTACCCCACGCCGGGCAAGTTCCCGGCGCCGTACCCCGACGGCCAGAGCCACAGCTACG
TGGCCGAGCTTCTCACCCCGGACCTGCCCGCGCACTGCGACCTGCAGCGGAGGGAGTACACGGAGCTGCGGGTGCCCGG
CGGCCCCCACCACCACCCGGCCCTGCACCCGGCCCTGTCCCGCCCGCTGCCCCTGGACNCGTCGCAGCCTTTCGGGCCT
CGCATCAAGNNNNNNC
CommentsThis gene is the true ortholog of KLF17 in other species.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XII
Area Opaca
 
1-3
stage 2
stage 2
stage 3
stage 3
stage 3
Area Opaca
Area Pellucida
Primitive Streak
 
4-6
stage 4
stage 5
stage 6
stage 6
stage 6
Area Opaca
Blood Islands
Epiblast
Primitive Streak
 
7-12
stage 7
stage 8
stage 8
stage 9
stage 10
stage 10
stage 10
stage 11
stage 11
stage 12
Blood Islands
Early Endoderm
Early Mesoderm
Forebrain
Neural Plate/Tube
anterior neuropore
xs
13
stage 13
Blood Islands
Forebrain
 

Entry 2

GEISHA IdEklf.Chervenak.2006Data SourcePublication
Complete cDNA Template Probeshow
TCGGGGCCACCGCTGCCGTACCCTGGTTTCGCCCACGGCCGCTTGGGCCCCCCCGAGGAGCCGCTGCCCGGTGCCGACC
CGCACCTGCTGGCCGACCTGCCGCCCCACTATGCCGTGGCCCCGCATCGCTACGCGCCCCACTTCGCCCCCCAGCCGCC
CCCTCAGTTTCATGGACACTTCAGTGTTTTCAGGGAGCCCCTAAAGGGGCCGGGGCCGGGCCCGGCGGGGCTGCCCGGG
CTGCTGGTCACGCCGCCCAACTCCCCGGTGCTGGAGTATTTTCCGGCCGGGGGCCCCCCCGAGGACTGCAAGCCCAAAC
GCGGCCGCCGCTCGTGGGCGCGCAAGCGGACGGCGACGCACAACTGTGAATACCCGGGCTGCGGCAAGACGTACACCAA
GAGCTCCCACCTCAAGGCGCACATGCGGACGCACACGGGTGAGAAGCCCTACCACTGCACCTGGGAAGGCTGCGGCTGG
AAGTTCGCCCGTTCCGATGAGCTGACCCGCCACTACCGCAAGCACACGGGGCACCGGCCCTTCCAGTGCCACCTCTGCG
AGCGGGCCTTCTCCCGCTCCGACCACCTGGCCCTGCACATGAAGCGGCACATGTGAGCGGGGGGCTGCGGGCGCGCTCG
GCACCCCCTCCACCGAGCGACTCCCTGGAGCAGCTCCTGCTGTAAATAGCGTTGGGGAGCAGCCCGGCCCTTCTCGCTT
GTAGCTGATAACTATTTTTCTCCTCCTGCCTCTGCTGTGAGAGCGGGGCTCGGCTGCGTGCTGGGGGAAGGATGGGCTG
CTGTG
CitationChervenak AP, Basu P, Shin M, Redmond LC, Sheng GJ, Lloyd JA. 2006. Identification, characterization, and expression pattern of the chicken EKLF gene. Dev Dyn. 2006 Jul;235(7):1933-40.
Copyright2006, Wiley-Liss Inc.
CommentsThis gene is the true ortholog of KLF17 in other species.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Area Pellucida
Blood Islands
Primitive Streak
 
7-12
stage 7
stage 8
stage 11
Blood Islands
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
 
13
stage 13
Blood
Blood Islands
Lateral Plate Mesoderm
Neural Plate/Tube
 

Entry 3

GEISHA IdKLF17.Antin.2010Data SourcePublication
Complete cDNA Template Probeshow
CGCAGCCATGCTGTTAACAGCTTAGGGGCGCGGGGCGGCGCAGAGCAGCGCTGCCGCCGCGGGGAGCGGAACGGAGCGG
AGCGGAGCCGGGCCCCGCGCTCCCCCCCCCCAGCCCCGTGCCCGGTCCCGGCTCCGCCATGGCGGCGGCCGTGGACGAG
AGCGCGCTGCCCTCCATCTCCACCTTCACCAACCTGTTGCCGCTGGAGGAGCGGCCCCCCGACATGATGCACAGGATGC
TGCAACACGACGGCTCCGCCGCTGCCGTGAAGCGGGAGGAGGACGAGTTGGGCAAATTCGTGGATTTGGACTTCATCCT
GGCGCACACCAGCAGCGGCGGGCAGGGACCGCCCGGCCCCAATTACCCTCTGCCTGAGACCCCCGAGAGCTGCGGCACC
ACGTACGACAGCGACGGCTCCTACCCCACGCCGGGCAAGTTCCCGGCGCCGTACCCCGACGGCCAGAGCCACAGCTACG
TGGCCGAGCTTCTCACCCCGGACCTGCCCGCGCACTGCGACCTGCAGCGGAGGGAGTACACGGAGCTGCGGGTGCCCGG
CGGCCCCCACCACCACCCGGCCCTGCACCCGGCCCTGTCCCGCCCGCTGCCCCTGGACNCGTCGCAGCCTTTCGGGCCT
CGCATCAAGNNNNNNC
CitationAntin PB, Pier M, Sesepasara T, Yatskievych TA, Darnell DK. Embryonic Expression of the Chicken Krüppel-like (KLF) Transcription Factor Gene Family. Dev Dyn. 2010 Jun;239(6):1879-87.
CopyrightCopyright © 2010 John Wiley & Sons, Inc. All Rights Reserved.
CommentsAuthors indicated they used EST pgp1n.pk003.f7 as a probe. This is GenBank acc # BI391117.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 2
stage 2
Epiblast
Primitive Streak
 
4-6
stage 4
Primitive Streak
 
7-12
stage 10
stage 12
Blood
Blood Islands
Neural Plate/Tube
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.48902

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona