GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

KPNA2
karyopherin subunit alpha 2

Gene
Official SymbolKPNA2
Official Full Namekaryopherin subunit alpha 2
CGNC ID50505
also known asimportin subunit alpha-1|importin subunit alpha-2|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001006209
PolypeptideNP_001006209
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.9297
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly34338FBgn0011823
Human3838ENSG00000182481MIM:600685
Mouse16647, 100039592, 100043906ENSMUSG00000018362MGI:103561, MGI:3704211, MGI:3704480
Xenopus493517, 380125979795
Zebrafish436607ENSDARG00000038066ZDB-GENE-040718-22ZFIN:ZDB-GENE-040718-22
Gene Ontology
Molecular Functionfrizzled binding, transcription corepressor activity
Biological Processadrenal gland development, androgen biosynthetic process, more...branching involved in ureteric bud morphogenesis, canonical Wnt signaling pathway, cell fate commitment, cellular response to transforming growth factor beta stimulus, embryonic epithelial tube formation, epithelial to mesenchymal transition, establishment of protein localization to plasma membrane, female gonad development, female sex determination, immature T cell proliferation in thymus, kidney morphogenesis, liver development, male gonad development, mesenchymal to epithelial transition, mesonephric tubule development, metanephric nephron morphogenesis, negative regulation of apoptotic signaling pathway, negative regulation of canonical Wnt signaling pathway, negative regulation of cell differentiation, negative regulation of cell migration, negative regulation of fibroblast growth factor receptor signaling pathway, negative regulation of male gonad development, negative regulation of testicular blood vessel morphogenesis, negative regulation of testosterone biosynthetic process, negative regulation of transcription, DNA-templated, negative regulation of wound healing, neuron differentiation, non-canonical Wnt signaling pathway via MAPK cascade, oocyte development, paramesonephric duct development, positive regulation of aldosterone biosynthetic process, positive regulation of bone mineralization, positive regulation of canonical Wnt signaling pathway, positive regulation of collagen biosynthetic process, positive regulation of cortisol biosynthetic process, positive regulation of dermatome development, positive regulation of focal adhesion assembly, positive regulation of meiosis, positive regulation of osteoblast differentiation, positive regulation of Rho GTPase activity, positive regulation of stress fiber assembly, protein palmitoylation, regulation of cell-cell adhesion, renal vesicle formation, renal vesicle induction, smooth muscle cell differentiation, somatotropin secreting cell differentiation, tertiary branching involved in mammary gland duct morphogenesis, thyroid-stimulating hormone-secreting cell differentiation, Wnt signaling pathway
Cellular Componentcell surface, cytoplasm, extracellular space, proteinaceous extracellular matrix
Links to other databases
Entrez Gene417420
Ensembl GeneENSGALG00000003584
KEGGgga:417420
GEISHA IdKPNA2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-CAGAAATGAGAAGGCGGCG-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGTGGCAGTTCACCACATCCC-3'cDNA Template Length851
Complete cDNA Template Probeshow
CAGAAATGAGAAGGCGGCGTATTGAAGTCAATGTAGAGTTGAGGAAAGCTAAAAAAGATGACCAGATGCTTAAAAGAAG
AAATGTTAGCACTTTTCCAGATGATGCCACTTCTCCCCTTCAGGAAAATAGGAGCAATCAGGTTTCTGCACACTGGTCT
GTTGAAGAAATAGTCAAAGGAGTTAATAGCAATAATATGGAGCTTCAATTGCAGGCTACTCAAGCTGCCAGGAAACTCC
TTTCAAGAGAGAAGCAGCCCCCCATAGACAACATAATTCAGGCTGGTTTGATTCCAAAATTTGTCTCCTTCTTGAGTAG
AGCAGACTGTAGTCCTATTCAATTTGAATCTGCCTGGGCGCTTACCAACATTGCTTCTGGCACATCAGAGCAAACCAAG
GCGGTAGTAGATGGTGGGGCTATTCCAGCCTTTATTTCACTTCTGGCCTCTCCTCACATTCACATCAGTGAACAAGCTG
TGTGGGCATTAGGAAATATTGCAGGGGATGGTTCTATCTACAGGGACCTAGTTATTAAATTTGGTGCAATTGAACCACT
GCTGACTCTACTAGCTGTTCCTGATCTCTCCTCTCTGGCTTCTGGATATTTACGCAATGTTACCTGGACCCTCTCAAAC
TTGTGTCGTAACAAGAATCCTGCACCACCCATAGAAGCTATTGAGCAGATTCTTCCAACTCTTGTCCGACTCTTGCATC
ATGATGATCATGAGGTGTTAGCAGACACATGCTGGGCACTCTCCTATCTAACAGATGGTTCCAATGACAGGATAGAAGT
TGTTGTGAAAACTGGATTGGTGCCACAGCTTGTCAAACTGCTGGGATGTGGTGAACTGCCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
stage 6
Area Opaca
Blood Islands
Early Endoderm
Early Mesoderm
Ectoderm
Endoderm
Epiblast
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
extraembryonic ectoderm
extraembryonic mesoderm
 
7-12
stage 8
stage 9
stage 11
Blood Islands
Central Nervous System
Ectoderm
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Primitive Streak
Somites
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm
 
13-18
stage 18
Ubiquitous Embryonic
 
19-24
stage 20
stage 24
Forebrain
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Mesonephros
Myotome
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Ubiquitous Embryonic
Wing Mesenchyme
 
25-26
stage 25
stage 25
stage 25
stage 25
stage 25
stage 26
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Liver
Lung
Mesonephros
Midbrain
Myotome
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Stomach
Ventricles
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.9297

Mouse

EmageMGI:103561, MGI:3704211, MGI:3704480
EurexpressMGI:103561, MGI:3704211, MGI:3704480
MGI GXDMGI:103561, MGI:3704211, MGI:3704480

Frog

Xenbase979795

Fruit Fly

BDGPFBgn0011823

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040718-22
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona