GEISHA - A Chicken Embryo Gene Expression Database
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UPF1
UPF1, RNA helicase and ATPase

Gene
Official SymbolUPF1
Official Full NameUPF1, RNA helicase and ATPase
CGNC ID2340
also known asRENT1, regulator of nonsense transcripts 1|UPF1 regulator of nonsense transcripts homolog
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_418237
PolypeptideXP_418237
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.6061
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly32153FBgn0030354
Human5976ENSG00000005007MIM:601430
Mouse19704ENSMUSG00000058301All phenotypic alleles (1):Targeted, knock-out(1) MGI:107995
Xenopus100135270, 4442896258021
Zebrafish406783ENSDARG00000016302ZDB-GENE-040426-2836ZFIN:ZDB-GENE-040426-2836
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420119
Ensembl GeneENSGALG00000003220
KEGGgga:420119
GEISHA IdL16Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCTTTCAGTGTGATTTAAAGTTGCAGCAATCAGCCTCTTCTTCCTACATCGGATAGCAGTTAGAGTGGAAGGAGCCTGC
GCGCTCGAGCAGGAGGAGGGTTTCGAAGTGTTTTCTGTATGCTTTAATTGGCTACTGTCTGGACTCTACTCTGTGAAAA
ACAAGCCTTTCTGTAAGATGAACTTTGCGCTTGAAAGGGGATGGGTTCCTGTGCCCTTCGGCCCTGGAGGAAAGGATGC
TAACAGGCCTGCTTCACTGCTCCCTCAGCTGGGGGGAAGAAGTAGTGGAAACTGGGGATTATATTGGTTTTGAAGTCAA
GACTACAATGTTACCGAAGCAGGTTGGAGAAATGGACAAAGCAGGCAGTTGTTGGAAGGTGGCCTCTGATAGATGGGTA
TAATTAGAGATAAGGGGGTAGGCTTTTGTGTGGCTTCTTCGGTGATGGATGCGGATAGCCGAAAGGTTCAGGTGTTGCA
GAACAAACCCGGAGCTGCTTTTTCAGGTAGTGCACCCAGCTGTGCCATCGGTGCTGGCTGAAGAAATAGCTGGAAGTCA
GAACTGAGAACAGCACATAAGAGAAGCCATCCAATTTCTAAGTTGTACCCATATCTTAAATAAGTCATATGGGAACACT
GGGAGCGTTT
Reverse cDNA Template Probeshow
ACAGCCCCCTTTTTATGGATCCCACAACGCCCCTTCTGCCCCAGCAGGGCCATGGGGAACCTCGGTGTTTTTAAGGTTT
GAATTAAGTTAGCGTTCTATCAAAGGGCTCCAAGTGTTTTTAGTCTTTTTTTGGGGGGGAACTCGAAATACCTCTCATA
TGAATGTACTTCAGCGACGTAAAACCCATTTTTGTACCTGGGGGGAAGCCCTTTCATCACTGTCCTTTCTGTAGAGTGT
TGCCCCGCTTTCATCACCTGTATTCGCTGTAGTTTTCAGGAGTGTCTCCCCCAGCACAGACCTGGTGTAGCGTACCCAC
AAACGTGAGTAGTGTGCACACAGAACGGAACAGGTGTTCAGCATTCGTGTTCAGTCCTGCAGTGAACGTGGTTCGAGAA
CTGCAAAACAAACTCAAATTTTCCAGAAATGAAAACCATTCTTTGTTCATAAAAAGCCTCCAGCATTTAGACTTCTAAA
ATGTGAAAGAATGGAGACACAGGCCACCTTCCTTCCTTGTGAGATGGACTGTTTTATTTATTAACATTGCCGAAGGGCT
TTTTGAATTTTTTTTCCTTCTGTAGGCTGCGTAGCTGCATAGACTTTTCAGATAGGTTTAAGCTGTAACCCTCTGTGCA
ATGCAATCCATTGAGTAATGTAACCCCCTCCCCCCCCCCTTTATTTCACTGATGGGAATGCCTGCCTCTGCTTCGTGCT
GTTTTTTTTCCTTTGTAGCAGTTACTCTGAGTTTTATAAATCCAGACATCAGTGCTAGCACGGTGTTACTCTTTTGATT
TTGTCTCAGTTTGTTTTAAACCTGTTTGTCATCAATAAAATATTAATAAACAGCTCTTGCATTCACAAAAAAAAAAAAA
AAAAAAA
Commentsno specific expression detected; ambiguous
no images
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.6061

Mouse

Emage
EurexpressMGI:107995
MGI GXDMGI:107995

Frog

Xenbase6258021

Fruit Fly

BDGPFBgn0030354

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040426-2836
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