GEISHA - A Chicken Embryo Gene Expression Database
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LCAT
lecithin-cholesterol acyltransferase

Gene
Official SymbolLCAT
Official Full Namelecithin-cholesterol acyltransferase
CGNC ID49668
also known asphosphatidylcholine-sterol acyltransferase|phospholipid-cholesterol acyltransferase
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_414027
PolypeptideXP_414027
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.3257
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Functionphosphatidylcholine-sterol O-acyltransferase activity
Biological Processcholesterol metabolic process
Cellular Componentextracellular region
Links to other databases
Entrez Gene396136
Ensembl Gene
KEGGgga:396136
GEISHA IdLCAT.Roy.2013Data SourcePublication
Complete cDNA Template Probeshow
GGGAGGACGGGCGCCGGGTTCACGCTGCTGACGCTGCTGCTGCTGCTCCCGCAGCCCACGTCCCAATTCTGGCTCTTCA
ACGTGCTCTTTCCACCCACCACCACCCCAGAGGCGCCCCCGACCAACAGCACACCGCCCTGGTGCCTCGTGCCCGGGTT
CCTTGGGAACCAGCTGGAAGCCAAACTGGACAAGCCGGATGTAGTGAACTGGATGTGCTACCGCAAAACCGAGGACTAT
TTCACCATCTGGCTCAACCTCAACACGTTCCTGCCAGTGGGAGTTGACTGTTGGATCGATAACACCAGGGTCGTGTACA
ACCGAACCGCTCGGAAAATGACCAACGCCCCCGGGGTGCACATCCGTGTGCCTGGCTTTGGCAAAACCTATTCTGTGGA
GTACCTGGATCAGAGTAAACTGGCAGGTTACCTGCACACCCTGGTTCAGAACCTGGTGAACAACGGCTACGTGAGGGAC
CAGACAGTTCGGGCAGCCCCCTATGACTGGAGGGTTGGTCCCCAGGAGCAGCCTGAATACTTCCAGAACCTGAAGGCAC
TGATAGAGGAGATGCACGATGAGTACCAGCAGCGTGTCTTCCTCATTGGGCACAGCATGGGCAACCTCAACGTCCTCTA
CTTCCTGCTCCAGCAGAAGCAAGCCTGGAAAGATCAGTACATTGGGGGCTTCATCTCACTGGGTGCCCCTTGGGGAGGG
TCCGTCAAGCCACTGCGTGTCCTGGCGTCAGGTGATAATCAGGGCATCCCACTTATGTCCAACATCAAGCTGCGTGAAG
AGCAGCGTATGACCACCACCAGCCCCTGGATGTTCCCAACGAGCTTGGCCTGGCCAGAGGACCACGTTTTCATCTCCAC
ACCCTCCTACAATTACACCTACCGGGACTACCAGCGGTTCTTCACCGATGTCAACTTGGAGGATGGTTGGTACATGTGG
GAGGACATGAAGGACTTGCTGAAGGGATTACCCCCTCCTGGTGTGGACACATATTGCCTTTATGGCACGGGCTATCCCA
CAGTGGAGACTTACATATACGATGAGCATTTCCCTTACGAGGACCCCGTGGACATGATTTATGGTGATGGGGACGACAC
TGTCAACAAACGCAGCTCAGAGCTGTGCAAGCGATGGCGCAACCAGCAAAAGCAGAAAGTGCACGTCCAGGAGCTGCGA
GGCATCGACCACCTCAACATGGTCTTCAGCAACCTGACGCTGACCCTCCATCAATGAAATACTGCTGGGGAGCACCAAG
GCTGGGTCTGGCACCAAGGAGCAGGGAGAGCCGAAGCAGATGGGTGCTCTGAGATCCAGCCCAGAGGTAGGGAGGAGGG
GGCACAAAGTCCTTAAGGAGCCCAGAAAGAACTGAAGGAGGCGATGGCCAGCTTCCCTCCATGCTTGTATCCACCAGAA
GCTGGCATGAAGAGGAGTAAAGGACTTGGAGGTGGGTATCAGAGAGAAGGAGCAAGAACAACAGCTCAGGTGGATGGGC
TGGCACCCTCTTCCATTCTGATTGTTTGGGTTTTTTTTTGTTTTGGGAGCAGTGATTAATTTACACTTCAGAGGCTTGT
CACTTCCCACTAGTGGATGATAATTAACCACGCTGCCAGCTCATTAACATCACACTCGTGGTTATGGTGTGTGAGCAAG
CCCTCGATGCTAGCAAGCTATCTTTAGACACTTCAGGCCGTGGTGCCATAGCCTCTTTTTATACAGACAGCCTCCATGT
AAGGCAAGATAGCACTCATGGTCCGGGGCAGCACCAGGGTGGGTAAGGACGGGAGGATAGGATAGGCACAGCTTGCAGA
AGGGCCCCCGCCAGCCCCCATCACACAGGCAACAAGCTGAGCCCCTGCTGCAAGACTGGCTTAGAATTAGCAGATCTAA
TAAACATACTTGGCTTCTAAAAAAGAAAACCGC
CitationRoy P, Kumar B, Shende A, Singh A, Meena A, Ghosal R, Ranganathan M, Bandyopadhyay A. A Genome-Wide Screen Indicates Correlation between Differentiation and Expression of Metabolism Related Genes. PLoS One. 2013 May 22;8(5):e63670
CopyrightThis is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI X91011.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Liver
 
25-26
stage 26
stage 26
Liver
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.3257

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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