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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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LEF1
lymphoid enhancer binding factor 1

Gene

Official Symbol	LEF1
Official Full Name	lymphoid enhancer binding factor 1
CGNC ID	7997
also known as	LEF-1, lymphoid enhancer-binding factor 1\|lymphiod enhancer binding factor 1\|transcription factor LEF-1, transcription factor LEF-1 , LEF-1
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_205013
Polypeptide	NP_990344
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.2694

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	51176	ENSG00000138795	MIM:153245	MIM:153245
Mouse	16842	ENSMUSG00000027985	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:96770
Xenopus	100493178, 398238			485516
Zebrafish	30701	ENSDARG00000031894	ZDB-GENE-990714-26	ZFIN:ZDB-GENE-990714-26

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	395865
Ensembl Gene	ENSGALG00000010529
KEGG	gga:395865

Entry 1

GEISHA Id	pgn1c.pk018.g14	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show CAAGGACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGAC ATCAAGTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGC AGGATTCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACC ATCGTACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCG CCACCCATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCA CCTACAGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTC CAGGCATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTT GGCTGGTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACAC CTCAAGTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAAAC AGAGCCAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTA GCAGAGTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCT
Reverse cDNA Template Probe	show TTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCNTGCTTCAGCCAACAGAGTAACTTAGAGCACCGCTGCCCATACAGCA CATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATTTAATGGTGCGACAGGATCAATT TTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGTAATTTCCTTGGTGTATATTTTA CTAGGTATGAGCTTTTAAACAACTGTCAAAAATTTGAACTACTTTTTAAATAATGGGGTTTATTTTCCTTTTTTTTTTT TTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTGTTAAACTACTTGTAACAAATAGTGGC CTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAGTCAGCTGGTCAGTAGCCATGTCAGTC TTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCAGTGAGTTTTCCTTTTTACCCATCGCC CTTTTCCTTGTAAAAAGCCCAGCACTTGAATTATTACTTCAATTGTTCTGTATTTGTATCTGTTTTTGTTAGCCTGTTA GTGGGATTTTATGCCAGTTGTTGAAATGAGCATTGATGTACCCATTTTTTTTAAATAGTAAGGCACAGCCTTTGCCAAA AATACTGACAACCAATTTTTTTTTTTTTGTCATTCCAGTTTGAGTTAAATGTGCTGAGCATTTGGGTTTTTGTTCGTTT TTTTTGTTTGTTTGTTCTTTTGTTTTTGTTTTTGTTTTTTTTTTAATAAAAGNCTTTGTAAT

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 7

stage 9

stage 10

stage 12

Head Mesenchyme
Lateral Plate Mesoderm
Midbrain
Paraxial Mesoderm
Primitive Streak
Somites

13-18

stage 16

stage 17

stage 18

Cranial Ganglia
Diencephalon
Ear/Otic Placcode
Eye
Face Mesenchyme
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Leg Mesenchyme
Limb Buds
Midbrain
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Tail
Wing Mesenchyme

19-22

stage 20

stage 21

stage 22

Cranial Ganglia
Eye
Face Mesenchyme
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Leg AER
Limb Buds
Midbrain
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Wing AER

Entry 2

GEISHA Id	Lef-1.Schmidt.2004	Data Source	Publication
Complete cDNA Template Probe	show ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
Citation	Schmidt, M, Patterson, M, Farrell, E, Munsterberg, A. Dynamic Expression of Lef/Tcf Family Members and B-Catenin During Chick Gastrulation, Neurulation, and Early Limb Development. Dev Dyn. 2004 Mar;229(3):703-7.
Copyright	Copyright © 2004 Wiley-Liss, Inc., A Wiley Company
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # AB188385).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

X-XIV

stage XI

Kohler's Sickle

1-3

stage 3

Primitive Streak

4-6

stage 4

Hensen's Node
Mesoderm, early
Primitive Streak

ingressing mesoderm

7-12

stage 7

stage 8

stage 11

Mesoderm, early
Paraxial Mesoderm
Primitive Streak
Somites

ingressing mesoderm
pm, presegmented mesoderm
presegmented mesoderm

13-18

stage 15

Mesoderm, early
Paraxial Mesoderm
Somites

presegmental mesoderm

19-22

stage 20

stage 22

Eye
Limb Buds
Myotome
Spinal Ganglia and Nerves
Wing AER

axons
fore limb
hind limb

Entry 3

GEISHA Id	LEF1.Skromne.2001	Data Source	Publication
Complete cDNA Template Probe	show ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
Citation	Skromne I, Stern CD. Interactions between Wnt and Vg1 signalling pathways initiate primitive streak formation in the chick embryo. Development. 2001 Aug;128(15):2915-27
Copyright	Printed in Great Britain © The Company of Biologists Limited 2001
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205013).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

X-XIV

stage XI

stage XIII

Epiblast
Kohler's Sickle

1-3

stage 2

stage 3

Primitive Streak

4-6

stage 4

stage 6

Lateral Plate Mesoderm
Paraxial Mesoderm
Primitive Streak

7-11

stage 11

Central Nervous System
Paraxial Mesoderm
Primitive Streak
Somites

Brain

Entry 4

GEISHA Id	Lef1.Theodosiou.2003	Data Source	Publication
Complete cDNA Template Probe	show ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
Citation	Theodosiou NA, Tabin CJ. Wnt signaling during development of the gastrointestinal tract. Dev Biol. 2003 Jul 15;259(2):258-71.
Copyright	Copyright © 2003 Elsevier Science (USA). All rights reserved.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205013). Authors indicated probe was ~1 kb.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

19-24

stage 22

stage 24

Duodenum
Hindgut

31-32

stage 32

Duodenum
Hindgut

Entry 5

GEISHA Id	LEF1.Quinlan.2009	Data Source	Publication
Complete cDNA Template Probe	show ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
Citation	Quinlan R, Graf M, Mason I, Lumsden A, Kiecker C. Complex and dynamic patterns of Wnt pathway gene expression in the developing chick forebrain. Neural Dev. 2009 Sep 4;4:35.
Copyright	Copyright © 2009 Quinlan et al; licensee BioMed Central Ltd. [This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.]
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_205013.2).

Stage

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Location (click to highlight)

Comments (click to highlight)

13-18

stage 13

stage 16

Forebrain
Hindbrain
Midbrain

stage 19

Forebrain
Hindbrain
Midbrain

Entry 6

GEISHA Id	LEF1.Olivera-Martinez.2007	Data Source	Publication
Complete cDNA Template Probe	show ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
Citation	Olivera-Martinez I, Storey KG., Wnt signals provide a timing mechanism for the FGF-retinoid differentiation switch during vertebrate body axis extension. Development. 2007 Jun;134(11):2125-35.
Copyright	Published by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Permission granted by Dr. Storey.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_205013)

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-10

stage 10

Paraxial Mesoderm

Entry 7

GEISHA Id	LEF1.Geetha-Loganathan.2009	Data Source	Publication
Complete cDNA Template Probe	show ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
Citation	Geetha-Loganathan, P, Nimmagadda, S, Antoni, L, Fu, K, Whiting, C, Francis-West, P and Richman, J. Expression of WNT signalling pathway genes during chicken craniofacial development. DEVELOPMENTAL DYNAMICS Volume 238, Issue 5, May 2009, Pages: 11501165.
Copyright	Dev. Dyn Copyright © 2009 John Wiley & Sons, Inc. All Rights Reserved.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205013).