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Gene Family QuickSearch
Human Disease Gene Search
LFNG The human orthologue of this gene is associated
Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol LFNG Official Full Name LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase CGNC ID 3150 also known as beta-1,3-N-acetylglucosaminyltransferase lunatic fringe|O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase|lunatic fringe homolog, lunatic fringe, O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, Beta-1,3-N-acetylglucosaminyltransferase gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Links to other databases
Entry 1 GEISHA Id pat.pk0010.e6 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show AGATGCACCCTGTGCATTTCTGGTTTGCCACGGGAGGAGCAGGGTTTTGTATCAGCCGAGGGCTGGCGCTGAAGATGAG
Entry 2 GEISHA Id Lfng.Bothe.2006 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Bothe I, Dietrich S. The molecular setup of the avian head mesoderm and its implication for craniofacial myogenesis. Dev Dyn. 2006 Oct;235(10):2845-60. Copyright Copyright © 2006 Wiley-Liss, Inc. Comments Insufficient information provided to verify exact probe sequence. Sequence obtained from NCBI (NM_204948).
Entry 3 GEISHA Id LFNG.Rodrigues.2006 Data Source Publication Complete cDNA Template Probe show GGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAGCTGCGGGAGGAAGCTGC
Citation Rodrigues S, Santos J, Palmeirim I.
Molecular characterization of the rostral-most somites in early somitic stages of the chick embryo.
Gene Expr Patterns. 2006 Oct;6(7):673-7. Epub 2006 Feb 20. Copyright Reprinted with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved. Comments Authors indicated they used the probe from Sakamoto et al., 1997. Sequence below was obtained from NCBI (NM_204948) and truncated as per Sakamoto.
Entry 4 GEISHA Id LFNG.Bok.2005 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Bok J, Bronner-Fraser M, Wu DK. Role of the hindbrain in dorsoventral but not anteroposterior axial specification of the inner ear. Development. 2005 May;132(9):2115-24. Epub 2005 Mar 23. Copyright Copyright for articles in Development are retained by the authors. Permission granted by MBF. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204948).
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Entry 5 GEISHA Id LFNG.Quinlan.2009 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Quinlan R, Graf M, Mason I, Lumsden A, Kiecker C. Complex and dynamic patterns of Wnt pathway gene expression in the developing chick forebrain. Neural Dev. 2009 Sep 4;4:35. Copyright Copyright © 2009 Quinlan et al; licensee BioMed Central Ltd. [This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.] Comments
As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204948).
Entry 6 GEISHA Id LFNG.Bok.2011 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Bok J, Raft S, Kong KA, Koo SK, Dräger UC, Wu DK. Transient retinoic acid signaling confers anterior-posterior polarity to the inner ear. Proc Natl Acad Sci U S A. 2011 Jan 4;108(1):161-6. Epub 2010 Dec 20. Copyright copyright © by the National Academy of Sciences Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204948.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 11
stage 11
Ear/Otic Placode 13-17 stage 17
stage 17
stage 17
stage 17
Ear/Otic Placode
Entry 7 GEISHA Id LFNG.Sienknecht.2009 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Sienknecht UJ, Fekete DM. Mapping of Wnt, frizzled, and Wnt inhibitor gene expression domains in the avian otic primordium. J Comp Neurol. 2009 Dec 20;517(6):751-64. Copyright Copyright © (2002 Wiley-Liss); This material is used by permission of Wiley-Liss, Inc., a subsidiary of John Wiley & Sons, Inc. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204948.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 1-3 stage 1
13-17 stage 16
stage 17
stage 17
Ear/Otic Placode Rhombomeres
Entry 8 GEISHA Id LFNG.Tossell.2011 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Tossell K, Kiecker C, Wizenmann A, Lang E, Irving C.
Notch signalling stabilises boundary formation at the midbrain-hindbrain organiser. Development. 2011 Sep;138(17):3745-57. Epub 2011 Jul 27.
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204948.1).
Entry 9 GEISHA Id LFNG.Tossell.2011b Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Tossell K, Andreae LC, Cudmore C, Lang E, Muthukrishnan U, Lumsden A, Gilthorpe JD, Irving C.
Lrrn1 is required for formation of the midbrain-hindbrain boundary and organiser through regulation of affinity differences between midbrain and hindbrain cells in chick. Dev Biol. 2011 Apr 15;352(2):341-52.
Copyright Copyright © 2011 Elsevier Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204948.1).
Entry 10 GEISHA Id LFNG.Sato.2002 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Sato Y, Yasuda K, Takahashi Y. Morphological boundary forms by a novel inductive event mediated by Lunatic fringe and Notch during somitic segmentation. Development. 2002 Aug;129(15):3633-44. Copyright Published by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204948.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-10 stage 10
stage 10
Paraxial Mesoderm
Entry 11 GEISHA Id cLFNG.Maroto.2005 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Maroto M, Dale JK, Dequéant ML, Petit AC, Pourquié O. Synchronised cycling gene oscillations in presomitic mesoderm cells require cell-cell contact. Int J Dev Biol. 2005;49(2-3):309-15. Copyright © UBC Press Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204948
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 12
stage 12
stage 12
stage 12
stage 12
stage 12
Paraxial Mesoderm
Entry 12 GEISHA Id LFNG.Larsen.2001 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Larsen CW, Zeltser LM, Lumsden A. Boundary formation and compartition in the avian diencephalon. J Neurosci. 2001 Jul 1;21(13):4699-711. Copyright Copyright © 2012 by the Society for Neuroscience
Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204948.1
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-23 stage 23
stage 23
Diencephalon
Entry 13 GEISHA Id LFNG.Tenin.2010 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Tenin G, Wright D, Ferjentsik Z, Bone R, McGrew MJ, Maroto M. The chick somitogenesis oscillator is arrested before all paraxial mesoderm is segmented into somites. BMC Dev Biol. 2010 Feb 25;10:24. Copyright authors retain copyright of their article, and grant any third party the right to use reproduce and disseminate the article, subject to the terms of BMC Developmental Biology copyright and license agreement Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204948.1
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 22
stage 24
Tail 25 stage 25
stage 25
Tail
Entry 14 GEISHA Id LFNG.Guinazu.2007 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Guinazu MF, Chambers D, Lumsden A, Kiecker C. Tissue interactions in the developing chick diencephalon. Neural Dev. 2007 Nov 13;2:25. Copyright Copyright © 2007 Guinazu et al.; licensee BioMed Central Ltd.
This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204948
Entry 15 GEISHA Id lunaticfringe.Aulehla.1999 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Aulehla A, Johnson RL. Dynamic expression of lunatic fringe suggests a link between notch signaling and an autonomous cellular oscillator driving somite segmentation. Dev Biol. 1999 Mar 1;207(1):49-61. Copyright Copyright © 1999 Academic Press. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204948.1). Lunatic Fringe is also known as LFNG in NCBI.
Entry 16 GEISHA Id LFNG.Lee.2020 Data Source Publication Complete cDNA Template Probe show GTACATGGGCGGCCGGTGGCGGCGCGGAGCGGGGCCGGGCGGCGGAGGTGGCAGCGAGGAGGAGGAGGATGCTGAAGAG
Citation Hyung Chul Lee, Hui-Chun Lu, Mark Turmaine, Nidia M. M. Oliveira, Youwen Yang† , Irene De Almeida and Claudio D. Stern. Molecular anatomy of the pre-primitive streak chick embryo Open Biol. null. 10.1098/rsob.190299. Copyright Copyright © 2020 The Authors. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (U91849.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) X-XIV stage X
stage XII
stage XIV
stage XIV
stage XIV
Area Opaca Area Pellucida Epiblast all
Data from NCBI Unigene EST ProfileGga.3180
Mouse Frog Fruit Fly Zebra Finch Zebrafish
