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LHX1
LIM homeobox 1

Gene
Official SymbolLHX1
Official Full NameLIM homeobox 1
CGNC ID4028
also known asLIM-1, LIM/homeobox protein Lhx1|LIM homeobox protein 1|domesticus (clone 2.3 kB) lim-1|homeobox protein Lim-1, Lim-1, Homeobox protein LIM-1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205413
PolypeptideNP_990744
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.789
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly31813FBgn0026411
Human3975ENSG00000273706MIM:601999
Mouse16869All phenotypic alleles (8):Targeted, knock-out(1) Targeted, other(7) MGI:99783
Xenopus100101708, 399323482481
Zebrafish30463, 30454ENSDARG00000014018, ENSDARG00000007944ZDB-GENE-980526-347, ZDB-GENE-980526-116ZFIN:ZDB-GENE-980526-347, ZFIN:ZDB-GENE-980526-116
Gene Ontology
Molecular Functionnucleic acid binding transcription factor activity, sequence-specific DNA binding, more...sequence-specific DNA binding transcription factor activity, transcription corepressor activity, zinc ion binding
Biological Processanatomical structure formation involved in morphogenesis, anatomical structure morphogenesis, more...anterior/posterior axis specification, anterior/posterior pattern specification, branching involved in ureteric bud morphogenesis, cell-cell signaling, cerebellar Purkinje cell differentiation, cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation, cerebellum development, cervix development, comma-shaped body morphogenesis, dorsal/ventral pattern formation, ectoderm formation, embryonic pattern specification, embryonic retina morphogenesis in camera-type eye, embryonic viscerocranium morphogenesis, endoderm formation, epithelium development, forebrain regionalization, gastrulation with mouth forming second, head development, horizontal cell localization, kidney development, kidney morphogenesis, lateral motor column neuron migration, mesonephros development, metanephric renal vesicle morphogenesis, metanephric S-shaped body morphogenesis, motor neuron axon guidance, negative regulation of transcription, DNA-templated, nephric duct elongation, nephric duct formation, nephric duct morphogenesis, oviduct epithelium development, paramesonephric duct development, pattern specification process, positive regulation of anterior head development, positive regulation of branching involved in ureteric bud morphogenesis, positive regulation of embryonic development, positive regulation of gastrulation, positive regulation of nephron tubule epithelial cell differentiation, positive regulation of transcription, DNA-templated, post-embryonic development, primitive streak formation, pronephros development, regulation of gene expression, regulation of RNA biosynthetic process, renal vesicle morphogenesis, retina layer formation, somite rostral/caudal axis specification, spinal cord association neuron differentiation, spinal cord motor neuron differentiation, S-shaped body morphogenesis, telencephalon development, transcription from RNA polymerase II promoter, ureteric bud development, urogenital system development, uterine epithelium development, vagina development, ventral spinal cord development
Cellular Componentnucleus, protein complex
Links to other databases
Entrez Gene396381
Ensembl Gene
KEGGgga:396381

Entry 1

GEISHA IdLHX1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATCCGATACCCCACTCTCAGAAATAAC
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGCCGAAACACCGAAAGAAGTCGcDNA Template Length612
Reverse cDNA Template Probeshow
GTGCGGGCTGCAAAAGGCCAATCTTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCA
GTGCTGTGAATGTAAATGCAATTTGACAGANAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTT
CGGTGTTTCGGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAG
TGTTCCACTTGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGA
AAACAAGTTCGTCTGCAAAGAANATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACC
GGCAGTGACCCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGT
CCGACAAGGAGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAA
AGCCAAACAGCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Primitive Streak
 
4-6
stage 4
stage 4
stage 5
Head Process
Hensen's Node
Notochord
Primitive Streak
 
7-12
stage 10
stage 10
stage 10
stage 11
stage 12
Intermediate Mesoderm
Paraxial Mesoderm
 
13-18
stage 15
stage 18
Central Nervous System
Forebrain
Intermediate Mesoderm
 
19-20
stage 20
stage 20
Central Nervous System
Hindbrain
Intermediate Mesoderm
 

Entry 2

GEISHA IdLim1.Chapman.2002Data SourcePublication
Complete cDNA Template Probeshow
ACAATAACAACATACACACATAAAAAAAAAAAAAAAGAAAGCAAACCCACGCCGCTGTTGTCGTCTTTTTGTTTTTATT
TCGATTTTTCGCTTGCCATCTGGGACGCCGATACCCCACTCTCAGAAATAACCAAAGACAATGGTTCACTGTGCGGGCT
GCAAAAGGCCAATATTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCAGTGCTGTGA
ATGTAAATGCAATTTGACAGAGAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTTCGGTGTTTC
GGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAGTGTTCCACT
TGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGAAAACAAGTT
CGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACCGGCAGTGAC
CCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGTCCGACAAGG
AGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAAAGCCAAACA
GCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAGCAGCTGGCGCAGGAGACC
GGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCGCCGCTCCAAGGAGCGCCGCATGAAGCAGCTGAGCGCGC
TGGGCGCCCGCCGGCACGCCTTCTTCCGCAGCCCGCGCAGGATGCGGCCGCTGGTGGACCGCCTGGAGCCCGGCGAGCT
GCTCCCCAACGGGCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCCGGGGCGAACTACGAGTTCTTC
CCGCAAGGCCCGCCCTCCTCGCAGGCGCAGACGCCGGTGGAGCTGCCGTTCGGGGCGGCGGGCGGACCGCCGGGCACGC
CGCTGGGCGCGTTGGAGCACCCGCTGCCCGGGCACCACCCGCCCGGAGAGGCGCAGCGCTTCCCCGACATGCTGGCGCA
CCCCGCCGGGGACTCGCCCAGCCCCGAGCCCACCCTGCCCGGCTCCCTGCACTCCATGTCCGCGGAAGTGTTCGGCCCC
AGTCCTCCGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACG
AAGCGGCTGTGTGGTAGCTTTAAGCGAACTGGGTCTAAGTAAGTGATGATCATCTAGTCTGCTTGTTGTTACGGTGTAC
AGAAATGAGTAAATCTAACATCTCTCCCGCCCTAAGACAATGTCACCTCGGGAACGAACTGTGCCCGGCGGCTCCGAGC
GGAGCGCTGCTGCAG
CitationChapman SC, Schubert FR, Schoenwolf GC, Lumsden A. Analysis of spatial and temporal gene expression patterns in blastula and gastrula stage chick embryos. Dev Biol. 2002 May 1;245(1):187-99.
Copyright2002 Elsevier Science (USA). All rights reserved.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XIII
Hypoblast
 
1-3
stage 3
Primitive Streak
 
4-6
stage 4
stage 5
stage 6
Endoderm
Head Process
Hensen's Node
Notochord
Primitive Streak
 

Entry 3

GEISHA IdLim1.Abe.2006Data SourcePublication
Complete cDNA Template Probeshow
ACAATAACAACATACACACATAAAAAAAAAAAAAAAGAAAGCAAACCCACGCCGCTGTTGTCGTCTTTTTGTTTTTATT
TCGATTTTTCGCTTGCCATCTGGGACGCCGATACCCCACTCTCAGAAATAACCAAAGACAATGGTTCACTGTGCGGGCT
GCAAAAGGCCAATATTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCAGTGCTGTGA
ATGTAAATGCAATTTGACAGAGAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTTCGGTGTTTC
GGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAGTGTTCCACT
TGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGAAAACAAGTT
CGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACCGGCAGTGAC
CCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGTCCGACAAGG
AGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAAAGCCAAACA
GCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAGCAGCTGGCGCAGGAGACC
GGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCGCCGCTCCAAGGAGCGCCGCATGAAGCAGCTGAGCGCGC
TGGGCGCCCGCCGGCACGCCTTCTTCCGCAGCCCGCGCAGGATGCGGCCGCTGGTGGACCGCCTGGAGCCCGGCGAGCT
GCTCCCCAACGGGCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCCGGGGCGAACTACGAGTTCTTC
CCGCAAGGCCCGCCCTCCTCGCAGGCGCAGACGCCGGTGGAGCTGCCGTTCGGGGCGGCGGGCGGACCGCCGGGCACGC
CGCTGGGCGCGTTGGAGCACCCGCTGCCCGGGCACCACCCGCCCGGAGAGGCGCAGCGCTTCCCCGACATGCTGGCGCA
CCCCGCCGGGGACTCGCCCAGCCCCGAGCCCACCCTGCCCGGCTCCCTGCACTCCATGTCCGCGGAAGTGTTCGGCCCC
AGTCCTCCGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACG
AAGCGGCTGTGTGGTAGCTTTAAGCGAACTGGGTCTAAGTAAGTGATGATCATCTAGTCTGCTTGTTGTTACGGTGTAC
AGAAATGAGTAAATCTAACATCTCTCCCGCCCTAAGACAATGTCACCTCGGGAACGAACTGTGCCCGGCGGCTCCGAGC
GGAGCGCTGCTGCAG
CitationAbe Y, Chen W, Huang W, Nishino M, Li YP. CNBP regulates forebrain formation at organogenesis stage in chick embryos. Dev Biol. 2006 Jul 1;295(1):116-27. Epub 2006 Apr 19.
CopyrightReprinted from Developmental Biology, 295, Yoko Abea, Wei Chena, Wei Huangc, Mizuho Nishinod and Yi-Ping Li, CNBP regulates forebrain formation at organogenesis stage in chick embryos, 116-127, Copyright 2006, with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved.
CommentsAs information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205413)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19
stage 19
Gut
Hindbrain
Midbrain
Notochord
 

Entry 4

GEISHA IdLim1.Chapman.2008Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
ACAATAACAACATACACACATAAAAAAAAAAAAAAAGAAAGCAAACCCACGCCGCTGTTGTCGTCTTTTTGTTTTTATT
TCGATTTTTCGCTTGCCATCTGGGACGCCGATACCCCACTCTCAGAAATAACCAAAGACAATGGTTCACTGTGCGGGCT
GCAAAAGGCCAATATTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCAGTGCTGTGA
ATGTAAATGCAATTTGACAGAGAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTTCGGTGTTTC
GGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAGTGTTCCACT
TGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGAAAACAAGTT
CGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACCGGCAGTGAC
CCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGTCCGACAAGG
AGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAAAGCCAAACA
GCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAGCAGCTGGCGCAGGAGACC
GGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCGCCGCTCCAAGGAGCGCCGCATGAAGCAGCTGAGCGCGC
TGGGCGCCCGCCGGCACGCCTTCTTCCGCAGCCCGCGCAGGATGCGGCCGCTGGTGGACCGCCTGGAGCCCGGCGAGCT
GCTCCCCAACGGGCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCCGGGGCGAACTACGAGTTCTTC
CCGCAAGGCCCGCCCTCCTCGCAGGCGCAGACGCCGGTGGAGCTGCCGTTCGGGGCGGCGGGCGGACCGCCGGGCACGC
CGCTGGGCGCGTTGGAGCACCCGCTGCCCGGGCACCACCCGCCCGGAGAGGCGCAGCGCTTCCCCGACATGCTGGCGCA
CCCCGCCGGGGACTCGCCCAGCCCCGAGCCCACCCTGCCCGGCTCCCTGCACTCCATGTCCGCGGAAGTGTTCGGCCCC
AGTCCTCCGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACG
AAGCGGCTGTGTGGTAGCTTTAAGCGAACTGGGTCTAAGTAAGTGATGATCATCTAGTCTGCTTGTTGTTACGGTGTAC
AGAAATGAGTAAATCTAACATCTCTCCCGCCCTAAGACAATGTCACCTCGGGAACGAACTGTGCCCGGCGGCTCCGAGC
GGAGCGCTGCTGCAG
CommentsImages Provided by Susan Chapman
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XIII
stage XIII
Area Pellucida
Hypoblast
 
1-3
stage 2
stage 2
stage 3
stage 3
stage 3
Hensen's Node
Primitive Streak
 
4-6
stage 4
stage 4
stage 5
stage 5
stage 6
Head Process
Headfold
Hensen's Node
Lateral Plate Mesoderm
Notochord
Paraxial Mesoderm
Primitive Streak
 
7-12
stage 7
stage 7
stage 7
stage 8
stage 8
stage 9
stage 10
stage 11
Blood Islands
Forebrain
Head Process
Hensen's Node
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Spinal Cord
 
13-18
stage 17
stage 18
stage 18
Diencephalon
Head Process
Hindbrain
Intermediate Mesoderm
Pharyngeal Arches and Clefts
Spinal Cord
 

Entry 5

GEISHA IdLIM1.James.2005Data SourcePublication
Complete cDNA Template Probeshow
ACAATAACAACATACACACATAAAAAAAAAAAAAAAGAAAGCAAACCCACGCCGCTGTTGTCGTCTTTTTGTTTTTATT
TCGATTTTTCGCTTGCCATCTGGGACGCCGATACCCCACTCTCAGAAATAACCAAAGACAATGGTTCACTGTGCGGGCT
GCAAAAGGCCAATATTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCAGTGCTGTGA
ATGTAAATGCAATTTGACAGAGAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTTCGGTGTTTC
GGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAGTGTTCCACT
TGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGAAAACAAGTT
CGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACCGGCAGTGAC
CCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGTCCGACAAGG
AGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAAAGCCAAACA
GCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAGCAGCTGGCGCAGGAGACC
GGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCGCCGCTCCAAGGAGCGCCGCATGAAGCAGCTGAGCGCGC
TGGGCGCCCGCCGGCACGCCTTCTTCCGCAGCCCGCGCAGGATGCGGCCGCTGGTGGACCGCCTGGAGCCCGGCGAGCT
GCTCCCCAACGGGCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCCGGGGCGAACTACGAGTTCTTC
CCGCAAGGCCCGCCCTCCTCGCAGGCGCAGACGCCGGTGGAGCTGCCGTTCGGGGCGGCGGGCGGACCGCCGGGCACGC
CGCTGGGCGCGTTGGAGCACCCGCTGCCCGGGCACCACCCGCCCGGAGAGGCGCAGCGCTTCCCCGACATGCTGGCGCA
CCCCGCCGGGGACTCGCCCAGCCCCGAGCCCACCCTGCCCGGCTCCCTGCACTCCATGTCCGCGGAAGTGTTCGGCCCC
AGTCCTCCGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACG
AAGCGGCTGTGTGGTAGCTTTAAGCGAACTGGGTCTAAGTAAGTGATGATCATCTAGTCTGCTTGTTGTTACGGTGTAC
AGAAATGAGTAAATCTAACATCTCTCCCGCCCTAAGACAATGTCACCTCGGGAACGAACTGTGCCCGGCGGCTCCGAGC
GGAGCGCTGCTGCAG
CitationJames RG, Schultheiss TM. Bmp signaling promotes intermediate mesoderm gene expression in a dose-dependent, cell-autonomous and translation-dependent manner. Dev Biol. 2005 Dec 1;288(1):113-25. Epub 2005 Oct 21.
CopyrightCopyright © 2005 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205413). LIM1 is also known as LHX1 in NCBI.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 11
Intermediate Mesoderm
 
all
 
  

Entry 6

GEISHA IdLHX1.Wilm.2004Data SourcePublication
Complete cDNA Template Probeshow
ACAATAACAACATACACACATAAAAAAAAAAAAAAAGAAAGCAAACCCACGCCGCTGTTGTCGTCTTTTTGTTTTTATT
TCGATTTTTCGCTTGCCATCTGGGACGCCGATACCCCACTCTCAGAAATAACCAAAGACAATGGTTCACTGTGCGGGCT
GCAAAAGGCCAATATTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCAGTGCTGTGA
ATGTAAATGCAATTTGACAGAGAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTTCGGTGTTTC
GGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAGTGTTCCACT
TGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGAAAACAAGTT
CGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACCGGCAGTGAC
CCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGTCCGACAAGG
AGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAAAGCCAAACA
GCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAGCAGCTGGCGCAGGAGACC
GGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCGCCGCTCCAAGGAGCGCCGCATGAAGCAGCTGAGCGCGC
TGGGCGCCCGCCGGCACGCCTTCTTCCGCAGCCCGCGCAGGATGCGGCCGCTGGTGGACCGCCTGGAGCCCGGCGAGCT
GCTCCCCAACGGGCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCCGGGGCGAACTACGAGTTCTTC
CCGCAAGGCCCGCCCTCCTCGCAGGCGCAGACGCCGGTGGAGCTGCCGTTCGGGGCGGCGGGCGGACCGCCGGGCACGC
CGCTGGGCGCGTTGGAGCACCCGCTGCCCGGGCACCACCCGCCCGGAGAGGCGCAGCGCTTCCCCGACATGCTGGCGCA
CCCCGCCGGGGACTCGCCCAGCCCCGAGCCCACCCTGCCCGGCTCCCTGCACTCCATGTCCGCGGAAGTGTTCGGCCCC
AGTCCTCCGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACG
AAGCGGCTGTGTGGTAGCTTTAAGCGAACTGGGTCTAAGTAAGTGATGATCATCTAGTCTGCTTGTTGTTACGGTGTAC
AGAAATGAGTAAATCTAACATCTCTCCCGCCCTAAGACAATGTCACCTCGGGAACGAACTGTGCCCGGCGGCTCCGAGC
GGAGCGCTGCTGCAG
CitationWilm B, James RG, Schultheiss TM, Hogan BL (2004). The forkhead genes, Foxc1 and Foxc2, regulate paraxial versus intermediate mesoderm cell fate. Dev Biol. 2004 Jul 1;271(1):176-89.
CopyrightCopyright © 2004 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205413).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-9
stage 9
Intermediate Mesoderm
 

Entry 7

GEISHA IdLIM1.Ohuchi.2010Data SourcePublication
Complete cDNA Template Probeshow
ACAATAACAACATACACACATAAAAAAAAAAAAAAAGAAAGCAAACCCACGCCGCTGTTGTCGTCTTTTTGTTTTTATT
TCGATTTTTCGCTTGCCATCTGGGACGCCGATACCCCACTCTCAGAAATAACCAAAGACAATGGTTCACTGTGCGGGCT
GCAAAAGGCCAATATTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCAGTGCTGTGA
ATGTAAATGCAATTTGACAGAGAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTTCGGTGTTTC
GGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAGTGTTCCACT
TGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGAAAACAAGTT
CGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACCGGCAGTGAC
CCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGTCCGACAAGG
AGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAAAGCCAAACA
GCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAGCAGCTGGCGCAGGAGACC
GGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCGCCGCTCCAAGGAGCGCCGCATGAAGCAGCTGAGCGCGC
TGGGCGCCCGCCGGCACGCCTTCTTCCGCAGCCCGCGCAGGATGCGGCCGCTGGTGGACCGCCTGGAGCCCGGCGAGCT
GCTCCCCAACGGGCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCCGGGGCGAACTACGAGTTCTTC
CCGCAAGGCCCGCCCTCCTCGCAGGCGCAGACGCCGGTGGAGCTGCCGTTCGGGGCGGCGGGCGGACCGCCGGGCACGC
CGCTGGGCGCGTTGGAGCACCCGCTGCCCGGGCACCACCCGCCCGGAGAGGCGCAGCGCTTCCCCGACATGCTGGCGCA
CCCCGCCGGGGACTCGCCCAGCCCCGAGCCCACCCTGCCCGGCTCCCTGCACTCCATGTCCGCGGAAGTGTTCGGCCCC
AGTCCTCCGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACG
AAGCGGCTGTGTGGTAGCTTTAAGCGAACTGGGTCTAAGTAAGTGATGATCATCTAGTCTGCTTGTTGTTACGGTGTAC
AGAAATGAGTAAATCTAACATCTCTCCCGCCCTAAGACAATGTCACCTCGGGAACGAACTGTGCCCGGCGGCTCCGAGC
GGAGCGCTGCTGCAG
CitationOhuchi H, Fukui H, Matsuyo A, Tomonari S, Tanaka M, Arai H, Noji S, Aoki J. Autotaxin controls caudal diencephalon-mesencephalon development in the chick. Dev Dyn. 2010 Oct;239(10):2647-58.
CopyrightCopyright © 1999–2011 John Wiley & Sons, Inc. All Rights Reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205413.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-17
stage 17
stage 17
stage 17
stage 17
stage 17
stage 17
stage 17
stage 17
stage 17
stage 17
stage 17
stage 17
stage 17
stage 17
stage 17
Diencephalon
Pharyngeal Arches and Clefts
Posterior cells of diencephalon examined here.

Entry 8

GEISHA IdLIM1.Merchan.2011Data SourcePublication
Complete cDNA Template Probeshow
GGAGCAAAGTGTTCCACTTGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATAT
CATAGACGAAAACAAGTTCGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCA
GCTACCACCGGCAGTGACCCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCG
CCAACGTGTCCGACAAGGAGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCAC
CACCATCAAAGCCAAACAGCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAG
CAGCTGGCGCAGGAGACCGGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCG
CitationMerchán,P, Bardet, SM, Puelles, L, Ferran, JL, Comparison of Pretectal Genoarchitectonic Pattern between Quail and Chicken Embryos. Front Neuroanat. 2011; 5: 23. Prepublished online 2010 December 29. Published online 2011 April 5
CopyrightCopyright © 2011 Merchán, Bardet, Puelles and Ferran.
CommentsThe probe was amplified by PCR using the following primers: 5′-GGAGCAAAGTGTTCCACTTG-3′ and 5′-CGGTTCTGGAACCACACCTGG-3′ and was extracted from NCBI Acc. # NM_205413.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
Diencephalon
Mesencephalon
Pineal Gland
CoP commissural pretectum,
Hab habenular region
JcP juxtacommissural pretectum,
OT optic tectum
PcP precommissural pretectum,
Quail
Quail
Th Thalamus,
mes mesencephalon,

Entry 9

GEISHA IdLIM1.Kao.2009Data SourcePublication
Complete cDNA Template Probeshow
ACAATAACAACATACACACATAAAAAAAAAAAAAAAGAAAGCAAACCCACGCCGCTGTTGTCGTCTTTTTGTTTTTATT
TCGATTTTTCGCTTGCCATCTGGGACGCCGATACCCCACTCTCAGAAATAACCAAAGACAATGGTTCACTGTGCGGGCT
GCAAAAGGCCAATATTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCAGTGCTGTGA
ATGTAAATGCAATTTGACAGAGAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTTCGGTGTTTC
GGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAGTGTTCCACT
TGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGAAAACAAGTT
CGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACCGGCAGTGAC
CCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGTCCGACAAGG
AGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAAAGCCAAACA
GCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAGCAGCTGGCGCAGGAGACC
GGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCGCCGCTCCAAGGAGCGCCGCATGAAGCAGCTGAGCGCGC
TGGGCGCCCGCCGGCACGCCTTCTTCCGCAGCCCGCGCAGGATGCGGCCGCTGGTGGACCGCCTGGAGCCCGGCGAGCT
GCTCCCCAACGGGCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCCGGGGCGAACTACGAGTTCTTC
CCGCAAGGCCCGCCCTCCTCGCAGGCGCAGACGCCGGTGGAGCTGCCGTTCGGGGCGGCGGGCGGACCGCCGGGCACGC
CGCTGGGCGCGTTGGAGCACCCGCTGCCCGGGCACCACCCGCCCGGAGAGGCGCAGCGCTTCCCCGACATGCTGGCGCA
CCCCGCCGGGGACTCGCCCAGCCCCGAGCCCACCCTGCCCGGCTCCCTGCACTCCATGTCCGCGGAAGTGTTCGGCCCC
AGTCCTCCGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACG
AAGCGGCTGTGTGGTAGCTTTAAGCGAACTGGGTCTAAGTAAGTGATGATCATCTAGTCTGCTTGTTGTTACGGTGTAC
AGAAATGAGTAAATCTAACATCTCTCCCGCCCTAAGACAATGTCACCTCGGGAACGAACTGTGCCCGGCGGCTCCGAGC
GGAGCGCTGCTGCAG
CitationKao TJ, Palmesino E, Kania A. SRC family kinases are required for limb trajectory selection by spinal motor axons. J Neurosci. 2009 Apr 29;29(17):5690-700.
CopyrightCopyright © 2009-12 by the Society for Neuroscience
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_205413.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-26
stage 26
stage 26
Spinal Cord
 

Entry 10

GEISHA IdLIM1/2.Davey.2006Data SourcePublication
Complete cDNA Template Probeshow
ACAATAACAACATACACACATAAAAAAAAAAAAAAAGAAAGCAAACCCACGCCGCTGTTGTCGTCTTTTTGTTTTTATT
TCGATTTTTCGCTTGCCATCTGGGACGCCGATACCCCACTCTCAGAAATAACCAAAGACAATGGTTCACTGTGCGGGCT
GCAAAAGGCCAATATTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCAGTGCTGTGA
ATGTAAATGCAATTTGACAGAGAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTTCGGTGTTTC
GGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAGTGTTCCACT
TGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGAAAACAAGTT
CGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACCGGCAGTGAC
CCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGTCCGACAAGG
AGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAAAGCCAAACA
GCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAGCAGCTGGCGCAGGAGACC
GGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCGCCGCTCCAAGGAGCGCCGCATGAAGCAGCTGAGCGCGC
TGGGCGCCCGCCGGCACGCCTTCTTCCGCAGCCCGCGCAGGATGCGGCCGCTGGTGGACCGCCTGGAGCCCGGCGAGCT
GCTCCCCAACGGGCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCCGGGGCGAACTACGAGTTCTTC
CCGCAAGGCCCGCCCTCCTCGCAGGCGCAGACGCCGGTGGAGCTGCCGTTCGGGGCGGCGGGCGGACCGCCGGGCACGC
CGCTGGGCGCGTTGGAGCACCCGCTGCCCGGGCACCACCCGCCCGGAGAGGCGCAGCGCTTCCCCGACATGCTGGCGCA
CCCCGCCGGGGACTCGCCCAGCCCCGAGCCCACCCTGCCCGGCTCCCTGCACTCCATGTCCGCGGAAGTGTTCGGCCCC
AGTCCTCCGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACG
AAGCGGCTGTGTGGTAGCTTTAAGCGAACTGGGTCTAAGTAAGTGATGATCATCTAGTCTGCTTGTTGTTACGGTGTAC
AGAAATGAGTAAATCTAACATCTCTCCCGCCCTAAGACAATGTCACCTCGGGAACGAACTGTGCCCGGCGGCTCCGAGC
GGAGCGCTGCTGCAG
CitationDavey MG, Paton IR, Yin Y, Schmidt M, Bangs FK, Morrice DR, Smith TG, Buxton P, Stamataki D, Tanaka M, Münsterberg AE, Briscoe J, Tickle C, Burt DW. The chicken talpid3 gene encodesa novel protein essentialfor Hedgehog signaling. Genes Dev. 2006 May 15; 20(10): 1365–1377.
CopyrightCopyright © 2006, Cold Spring Harbor Laboratory Press
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205413.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-20
stage 20
stage 20
Spinal Cord
 

Entry 11

GEISHA IdLIM1.Ferran.2007Data SourcePublication
Complete cDNA Template Probeshow
ACAATAACAACATACACACATAAAAAAAAAAAAAAAGAAAGCAAACCCACGCCGCTGTTGTCGTCTTTTTGTTTTTATT
TCGATTTTTCGCTTGCCATCTGGGACGCCGATACCCCACTCTCAGAAATAACCAAAGACAATGGTTCACTGTGCGGGCT
GCAAAAGGCCAATATTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCAGTGCTGTGA
ATGTAAATGCAATTTGACAGAGAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTTCGGTGTTTC
GGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAGTGTTCCACT
TGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGAAAACAAGTT
CGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACCGGCAGTGAC
CCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGTCCGACAAGG
AGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAAAGCCAAACA
GCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAGCAGCTGGCGCAGGAGACC
GGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCGCCGCTCCAAGGAGCGCCGCATGAAGCAGCTGAGCGCGC
TGGGCGCCCGCCGGCACGCCTTCTTCCGCAGCCCGCGCAGGATGCGGCCGCTGGTGGACCGCCTGGAGCCCGGCGAGCT
GCTCCCCAACGGGCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCCGGGGCGAACTACGAGTTCTTC
CCGCAAGGCCCGCCCTCCTCGCAGGCGCAGACGCCGGTGGAGCTGCCGTTCGGGGCGGCGGGCGGACCGCCGGGCACGC
CGCTGGGCGCGTTGGAGCACCCGCTGCCCGGGCACCACCCGCCCGGAGAGGCGCAGCGCTTCCCCGACATGCTGGCGCA
CCCCGCCGGGGACTCGCCCAGCCCCGAGCCCACCCTGCCCGGCTCCCTGCACTCCATGTCCGCGGAAGTGTTCGGCCCC
AGTCCTCCGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACG
AAGCGGCTGTGTGGTAGCTTTAAGCGAACTGGGTCTAAGTAAGTGATGATCATCTAGTCTGCTTGTTGTTACGGTGTAC
AGAAATGAGTAAATCTAACATCTCTCCCGCCCTAAGACAATGTCACCTCGGGAACGAACTGTGCCCGGCGGCTCCGAGC
GGAGCGCTGCTGCAG
CitationFerran JL, Sánchez-Arrones L, Sandoval JE, Puelles L. A model of early molecular regionalization in the chicken embryonic pretectum. J Comp Neurol. 2007 Dec 1;505(4):379-403.
CopyrightCopyright © 1999–2012 John Wiley & Sons, Inc. All Rights Reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_205413.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
stage 17
stage 17
Diencephalon
Mesencephalon
DMB, diencephalic-mesencephalic boundary
19-24
stage 24
stage 24
stage 24
stage 24
Diencephalon
Mesencephalon
ABB alar basal boundary
ABB, alar basal boundary
CoP commissural pretectum
CoP, commissural pretectum
Double labeled: PAX3, immunoreaction(brown), LIM1, in situ hybridization
Double labeled: PAX7, immunoreaction(brown); LIM1, in situ hybridization(blue)
JcP juxtacommissural pretectum
JcP, juxtacommissural pretectum
tg, tectal gray
25
stage 25
stage 25
stage 25
Diencephalon
CoD2 dorsal 2 subdomain of commissural pretectum
CoV ventral subdomain of commissural pretectum

Entry 12

GEISHA IdLim1.Boije.2008Data SourcePublication
Complete cDNA Template Probeshow
CGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACGAAGCGGC
TGTGTGGTAGCTTTAAGCGAACTGGG
CitationBoije H, Edqvist PH, Hallböök F. Temporal and spatial expression of transcription factors FoxN4, Ptf1a, Prox1, Isl1 and Lim1 mRNA in the developing chick retina. Gene Expr Patterns. 2008 Jan;8(2):117-23. Epub 2007 Oct 1. DIO: 10.1016/j.modgep.2007.09.004.
CopyrightCopyright © 2007 Elsevier B.V. 
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Boije et al. 2008. Lim1 is also known as LHX1 in NCBI.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Retina
 
19-24
stage 20
stage 22
stage 22
stage 22
stage 22
stage 24
Diencephalon
Eye
Hindbrain
Nasal Placode/Nerve
Retina
Rhombomeres
Telencephalon
 
25-30
stage 26
stage 29
Retina
 
31-44
stage 32
stage 35
stage 38
stage 41
stage 44
Retina
 
all
 
 
  

Entry 13

GEISHA IdLIM1.Fleming.2013Data SourcePublication
Complete cDNA Template Probeshow
ACAATAACAACATACACACATAAAAAAAAAAAAAAAGAAAGCAAACCCACGCCGCTGTTGTCGTCTTTTTGTTTTTATT
TCGATTTTTCGCTTGCCATCTGGGACGCCGATACCCCACTCTCAGAAATAACCAAAGACAATGGTTCACTGTGCGGGCT
GCAAAAGGCCAATATTGGACCGGTTCTTGTTGAATGTACTGGACAGGGCTTGGCATGTGAAGTGTGTTCAGTGCTGTGA
ATGTAAATGCAATTTGACAGAGAAATGCTTTTCGCGAGAAGGCAAGCTTTACTGCAAAAACGACTTCTTTCGGTGTTTC
GGGACCAAGTGTGCGGGCTGTGCCCAGGGCATCTCCCCCAGCGACCTGGTCCGCAGGGCGCGGAGCAAAGTGTTCCACT
TGAACTGTTTTACGTGTATGATGTGCAACAAGCAGCTCTCCACCGGCGAGGAGCTCTATATCATAGACGAAAACAAGTT
CGTCTGCAAAGAAGATTACCTAAATAACAGCAATACTGCCAAAGAAAACAGCCTGCATTCAGCTACCACCGGCAGTGAC
CCCAGCCTGTCCCCCGACTCCCAAGACCCCTCCCAGGACGACGCCAAGGACTCGGAAAGCGCCAACGTGTCCGACAAGG
AGACGGGCAGCAACGAGAACGACGACCAGAACCTGGGGGCCAAGCGGCGGGGGCCCCGCACCACCATCAAAGCCAAACA
GCTAGAGACTCTGAAGGCCGCCTTCGCGGCCACCCCCAAACCCACGCGGCACATCAGGGAGCAGCTGGCGCAGGAGACC
GGCCTCAACATGCGCGTCATCCAGGTGTGGTTCCAGAACCGCCGCTCCAAGGAGCGCCGCATGAAGCAGCTGAGCGCGC
TGGGCGCCCGCCGGCACGCCTTCTTCCGCAGCCCGCGCAGGATGCGGCCGCTGGTGGACCGCCTGGAGCCCGGCGAGCT
GCTCCCCAACGGGCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCCGGGGCGAACTACGAGTTCTTC
CCGCAAGGCCCGCCCTCCTCGCAGGCGCAGACGCCGGTGGAGCTGCCGTTCGGGGCGGCGGGCGGACCGCCGGGCACGC
CGCTGGGCGCGTTGGAGCACCCGCTGCCCGGGCACCACCCGCCCGGAGAGGCGCAGCGCTTCCCCGACATGCTGGCGCA
CCCCGCCGGGGACTCGCCCAGCCCCGAGCCCACCCTGCCCGGCTCCCTGCACTCCATGTCCGCGGAAGTGTTCGGCCCC
AGTCCTCCGTTCTCCTCGATATCCGTCAACGGCGGTGCTAACTACGGCAATCACTTGTCACACCCACCAGAAATGAACG
AAGCGGCTGTGTGGTAGCTTTAAGCGAACTGGGTCTAAGTAAGTGATGATCATCTAGTCTGCTTGTTGTTACGGTGTAC
AGAAATGAGTAAATCTAACATCTCTCCCGCCCTAAGACAATGTCACCTCGGGAACGAACTGTGCCCGGCGGCTCCGAGC
GGAGCGCTGCTGCAG
CitationFleming BM, Yelin R, James RG, Schultheiss TM. A role for Vg1/Nodal signaling in specification of the intermediate mesoderm. Development. 2013 Apr;140(8):1819-29
Copyright© 2013. Published by The Company of Biologists Ltd
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_205413.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
stage 10
Intermediate Mesoderm
Surface Ectoderm
control = right side of embryo
control = right side of section
stage 10+
stage 10+
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.789

Mouse

EmageMGI:99783
EurexpressMGI:99783
MGI GXDMGI:99783

Frog

Xenbase482481

Fruit Fly

BDGPFBgn0026411

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-980526-347, ZDB-GENE-980526-116
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