GEISHA - A Chicken Embryo Gene Expression Database
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LYPD1
LY6/PLAUR domain containing 1

Gene
Official SymbolLYPD1
Official Full NameLY6/PLAUR domain containing 1
CGNC ID66160
also known asly6/PLAUR domain-containing protein 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_003641592
PolypeptideXP_003641640
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene100859784
Ensembl GeneENSGALG00000012176
KEGGgga:100859784

Entry 1

GEISHA IdLYPD1.Anderson.2022Data SourcePublication
Complete cDNA Template Probeshow
CGCGGTGCGGCGCGCGCTACTTTGGCGCGCTGCGCTGAGGGCACCGCCGGGGCTGGAGCCGGAGCCGGGCGCGGGGCAG
CGCTCCGCTCCGCTCGGGGTGTGCCGCCTGCTGGTCGCCGCCCGCCCCGCGCCGGGACCGGGGGCTGAGCGCTCGACGC
GCTGCTTGGGGCCGGCGGGCGGTGCGAGGTGTTTGTGCCCAACTGGTGCTGAGCTGCGCGTCCCTGGGCTCAGTAACAA
GTGAACAGGGAAAGGTTTTGGTTTGCAAATACAGTGCTACCAATGCGAGGAGTTCCAGCTAAACAATGACTGCTCCTCT
CCGGAGTTCATTGTGAACTGTACGGTGAACGTTCAAGATATGTGTCAGAAAGAAGTAATGGAGAAAAGTTTTGGAATCA
TGTATCGCAAATCCTGCGCATCTTCAGCAGCGTGTCTGATAGCTTCTGCTGGATACCAATCTTTTTGCTCTCCAGGAAA
GTGAACTCTGTGTGTATCAGTTGCTGCAACACTCCGCTCTGCAACGGACCCGGCCGAAGAAGAGGGGGAATTCTGGTGT
GATGCTGAGGGCACACATGATAAACCACCGNTCTGCTCCTTGAATTCTCTCTCTTGGTTTGTATTGCTAAACTTGGAGC
AAGTTTCTTGTCCTGACACAGTTTGTTCTATCTCCTTTCTTCAAAAA
CitationAnderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
CopyrightCopyright © 2019 Elsevier Inc. All rights reserved.
CommentsImages and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST272k7. Related paper: Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Widespread Expression
 

Entry 2

GEISHA IdLYPD1.Anderson.2019Data SourcePublication
Complete cDNA Template Probeshow
CGCGGTGCGGCGCGCGCTACTTTGGCGCGCTGCGCTGAGGGCACCGCCGGGGCTGGAGCCGGAGCCGGGCGCGGGGCAG
CGCTCCGCTCCGCTCGGGGTGTGCCGCCTGCTGGTCGCCGCCCGCCCCGCGCCGGGACCGGGGGCTGAGCGCTCGACGC
GCTGCTTGGGGCCGGCGGGCGGTGCGAGGTGTTTGTGCCCAACTGGTGCTGAGCTGCGCGTCCCTGGGCTCAGTAACAA
GTGAACAGGGAAAGGTTTTGGTTTGCAAATACAGTGCTACCAATGCGAGGAGTTCCAGCTAAACAATGACTGCTCCTCT
CCGGAGTTCATTGTGAACTGTACGGTGAACGTTCAAGATATGTGTCAGAAAGAAGTAATGGAGAAAAGTTTTGGAATCA
TGTATCGCAAATCCTGCGCATCTTCAGCAGCGTGTCTGATAGCTTCTGCTGGATACCAATCTTTTTGCTCTCCAGGAAA
GTGAACTCTGTGTGTATCAGTTGCTGCAACACTCCGCTCTGCAACGGACCCGGCCGAAGAAGAGGGGGAATTCTGGTGT
GATGCTGAGGGCACACATGATAAACCACCGNTCTGCTCCTTGAATTCTCTCTCTTGGTTTGTATTGCTAAACTTGGAGC
AAGTTTCTTGTCCTGACACAGTTTGTTCTATCTCCTTTCTTCAAAAA
CitationAnderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
CopyrightCopyright © 2019 Elsevier Inc. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
stage 12
Heart
 

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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