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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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MAFF
MAF bZIP transcription factor F

Gene

Official Symbol	MAFF
Official Full Name	MAF bZIP transcription factor F
CGNC ID	9324
also known as	transcription factor MafF\|nuclear b-Zip protein MafF\|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F, Transcription factor MafF , V-maf musculoaponeurotic fibrosarcoma oncogene homolog F
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_204757
Polypeptide	NP_990088

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	23764	ENSG00000185022		MIM:604877
Mouse	17133	ENSMUSG00000042622	All phenotypic alleles (5):Targeted, knock-out(1) Targeted, other(4)	MGI:96910
Xenopus	100488557, 495449			489963
Zebrafish	393307	ENSDARG00000028957	ZDB-GENE-040426-1280	ZFIN:ZDB-GENE-040426-1280

Gene Ontology

Molecular Function	sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity
Biological Process	in utero embryonic development, regulation of epidermal cell differentiation, more...
Cellular Component	nucleus

Links to other databases

Entrez Gene	395519
Ensembl Gene	ENSGALG00000012277
KEGG	gga:395519

Entry 1

GEISHA Id	ChEST1004n9	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show CTCGAGCCGCCCTTGCTGCATCAGTGGGTGCGTGCAGGAGGGGATGAGTCCATGTGAATGGATGGAGGCAGGGAAACAC CCCACAGCTCCAAGCTGGCAGGAAAACACAGTGCACCCCATTTTTGGGGGGAGCTGAGCGCAGGGCAGGCGCTCCCAGG AGCACGTGCCAGAGAGGGAAACGGGGAGAGGGTTTTGCAGAAGGATGAGGGTGAACGGGGTCAGCATTGGCCCAATGAG AGGGAGTGGAGATGGCAAGAGAACGTGCAGGTCGGAGGGGAACAGAAAGTGGCTGCAGGTTGAGGTGAGCGGGATGGCG CAGCGCTGTGACAGCAACGGAGGGGGACCCTTGGGCAGGGGGCATCTGGGGGCTGTGAGACAAAAAGGAGACGTGGAGG GGCCGTTTTCTCCCCATCACACACATCCTTCACGCCTCTTTGTGACCTGAGTGGGACACTCAGCCCAACCGGGTGCCCT GGAACACAGAGGCAGCGGCAGGAAGGAAGCGGAGGCAGCTGGAGTGCAGATAACTGTTTTGCTGCACACAGCCCTGCTT GGATGGCCCCACCAAGCCCTGTGCTCCGCTGGCTCCAGGGCTTAGGCTGCACAAAGCGAGGAGACAGAGGCGTGTGAGG TGTGGAGGGCAGAGCATCCCGCTCCTGGGAGCTGCCTGGCAGGCAGCTTCTCCCTTGGGTTTTCCTCCAGCTTGGACAT CAGCACAGAGGTCTGGGCATCGCCACGCCAGCCGCCGTCGGCTGCAGCCTCCGTCCTAACCCAGAGAGGTGCCCGCCCA GAGGGCACTGTGTTAGCATCCCCTCGGTCCCACTCCCCCTGGGTTTATTTATTGCACGAACGTAAGTAATTTTCACGTC CTCTTTGCCATTCCGCCTCTCGGCACAGCCAGGATGTTGGTACAAAGCCGTACTTTATATTTTATATATGCAAATCACA TTTTATCNTATATGCGC

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

stage 6

Early Endoderm
Early Mesoderm
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Primitive Streak

7-12

stage 8

stage 9

stage 10

stage 11

Dermomyotome
Endocardium
Extraembryonic Mesoderm
Forebrain
Foregut
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesencephalon
Midbrain
Neural Plate/Tube
Notochord
Pharynx
Primitive Streak
Sclerotome
Somatic Mesoderm
Somites

13-18

stage 14

stage 15

stage 17

stage 18

Dermomyotome
Endoderm
Epicardium
Eye
Forebrain
Foregut
Gut
Head Mesenchyme
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Lens
Limb Buds
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Proepicardium
Somatic Mesoderm
Somites
Trunk Mesenchyme

19-24

stage 21

Extraembryonic
Hindbrain
Limb Buds
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Wing

stage 25

Dermomyotome
Gut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Lung
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Wing Mesenchyme

Entry 2

GEISHA Id	MAFF.Lecoin.2004	Data Source	Publication
Complete cDNA Template Probe	show TCGGCTCGGAGCGCGGGGAGCCCTCCCGCCTCGCCGCACCCCTCCCGCGCAGCGCAGCCCGGCGCCGCGACACAGCGCG GCCTCCGGGCCGGTACGGGGCGACCATGGCTGCGGATGGGCTGTCCAGCAAAGCATTAAAGGTGAAGCGGGAGCTGGGA GAGAACACGCCGCTGCTGTCGGATGAGGAGCTGATGGGGCTGTCGGTGCGGGAGCTCAACCACCACCTGCGGGGCCTTT CCAAGGAGGAGGTGGCGAGGCTGAAGCAGCGACGACGGACGCTGAAGAACCGGGGCTACGCTGCCAGCTGTCGAGTGAA GCGTGTCTGCCAGAAGGAAGAGCTGCAGAAGCAGAAGATGGAGCTGGAATGGGAGGTGGACAAGCTGGCCCGGGAGAAT GCTGCCATGCGCCTGGAGCTTGACACTCTCCGTGGCAAGTACGAGGCCCTGCAGGGCTTTGCCCGCACTGTGGCTGCCC ACGGGCCACCTGCCAAAGTGGCCACTGCCAGCGTCATCACCATCGTCAAGTCTGGTGCCAACCAGGCCGCCTACTCCTA GTGCCGGCCCCGTCCCTCGGCTGGGCACTGTCCCCCCCCCCAGGGCGCCTTCCCCTACGTACCGACTTGAGGCTCTCCT TTGCTGGGAGCTGCACCCCAAATCCTTCCCTCTGGTCCCCAGACCTCCGCTTGTAGGGAGGACTGCCACCACGTGTGTG CCGGGTGGGATGGCACCCTACTGGAGATCCTGTGGGGGAAGCCCAAAGCCCGGCACTGCCCCCGTGGTCCCATCCCTTG CTGCATCAGTGGGTGCGTGCAGGAGGGGATGTGTCCGTGTGAATGGATGGAGGCAGGGAAACACCCCACAGCTCCAAGC TGGCAGGAAAACCACAGTGCACCCCATTTCTGGGGGGAGCTGAGCGCAGGGCAGGCGCTCCCAGGAGCACGTGCCAGAG AGGGAAACGGGGAGAGGGTTTTGCAGAAGGATGAGGGTGAACGGGGTCAGCATTGGCCCAATGAGAAGGGGCGGAGATG GCAAGAGAACGTGCAGGTCGGAGGGGAACAGAAAGTGGCTGCAGGTTGAGGTGAGCGGGATGGCGCAGCGCTGTGACAG CGATGGAGGGGGACCCTTGGGCAGGGGGCATCTGGGGGCTGTGAGACAAAAAGGAGATGTGGAGGGGCCGTTTTCTCCC CATCACACACATCCTTCACGCCTCTTCGTGACCTGAGTGGGACACTCAGCCCAACCGGGTGCCCTGGAACACAGAGGCA GCGGCAGGAAGGAAGCGGAGGCAGCTGGAGTGCAGATAACTGCTGTTTTGCTGCACACAGCCCTGCTTGGATGGCCCCA CCAAGCCCTGTGCTCCGCTGGCTCCAGGGCTTAGGCTGCACAAAGCGAGGAGACAGAGGCGTGTGAGGTGTGGAGGGCA GAGCATCCCGCTCCTGGGAGCTGCCTGGCAGGCAGTTCTCCCTTGGGTTTTCCTCCAGCTTGGACATCAGCACAGAGGT CTGGGCATCGCCACGCCAGCCGCCGTCGGCTGCAGCCTCCGTCCTAACCCAGAGAGGTGCCCGCCCAGAGGGCACTGTG TTAGCATCCCCTCGGTCCCGCTCCCCCTGGGTTTATTTATTGCACGAACGTAAGTTATTTTCACGTCCTCTTTGCCATT CCGCCTCTCGGCACAGCCAGGATGTTGGTACAGAGCCGTACTTTATATTTTATATATGCAAATCACATTTTATCTTATA TAGAGCAAAAAAAAAAAAAAAAAAACCTATTTATTTTCTGACTTACAGTATGTGTCCTACCC
Citation	Lecoin L, Sii-Felice K, Pouponnot C, Eychène A, Felder-Schmittbuhl MP. Comparison of maf gene expression patterns during chick embryo development. Gene Expr Patterns. 2004 Jan;4(1):35-46.
Copyright	Reprinted with permission from Elsevier. Copyright © 2003 Elsevier B.V. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204757).