GEISHA - A Chicken Embryo Gene Expression Database
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MEF2D
myocyte enhancer factor 2D

Gene
Official SymbolMEF2D
Official Full Namemyocyte enhancer factor 2D
CGNC ID
also known asmyocyte-specific enhancer factor 2D|MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D)
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001031600
PolypeptideNP_001026771
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.4344
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene431059
Ensembl Gene
KEGGgga:431059

Entry 1

GEISHA IdMEF2D.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCTTCACCAAGCGTAAGTTCGGC
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGTTCAGGTCACCCCCAAGCATCcDNA Template Length573
Forward cDNA Template Probeshow
AAAAGGATAAAGCCCGCATGGGTGGCCGCTGCGGCAGCCCTGGGGACACGTATTCCTCTGCAGTGTTGGCTGCTGTGGG
GAGAGGAGCCGGGGGTCGGTCAGCGACGAGGTCACCAAGGATTGGGTCACCAACGAACTGCCCGGGCTGCTGAACTGCA
GTGTGTTCTGGTTGGTCACGGGAACCGTCACTGGCATGGCAAAGTTTGGCGTGGGCACTGCGGAACCGTATCGCTTGAA
CAGGATATCCAGATCCTCGCTGCCTTTACGGTATTTATCCTCCATCAAGGGGCTCTGGTCTATCGAGTCATCTCCGTCG
GGTTCCGGGCTGTCACAGCCATTAAAACCTTTCTTTCTTAACGTCTCAATGATGTCCGCATTGGTCCGGCTCTCATGGG
GCTCGTTGTACTCAGTGTACTTAAGCAGCACCTTGTCCATGTCGGTGCTGGCATACTGGAACAGCTTGTTGGAGTGGTA
GAAGATGATCAGGGCGATCTCGCAGTCGCACAACACGCTCAGCTCGTAGGCTTTCATCGTCAANCCNAACTTACACTAG
ATAAATAAAGACGCCGAGCAGCGCATGTTGTGGGGCTACGCGATATCNCCGAATCTTTTTCACCACTCAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 6
Extraembryonic Mesoderm
Lateral Plate Mesoderm
 
7-12
stage 8
stage 8
stage 10
stage 11
stage 12
Blood Vessels
Extraembryonic Mesoderm
Heart
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites
 
13-18
stage 16
stage 17
Heart
Myotome
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
 
19-24
stage 21
stage 23
Allantois
Ear/Otic Placode
Head Mesenchyme
Heart
Leg Mesenchyme
Limb Buds
Myotome
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Wing Mesenchyme
 
25
stage 25
Allantois
Head Mesenchyme
Heart
Leg Mesenchyme
Myotome
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Wing Mesenchyme
 

Entry 2

GEISHA IdMEF2D.Anderson.2022Data SourceDirect Submission
Complete cDNA Template Probeshow
CCTGAACTCATCCTGCTCCAGGCCACAGGGAGGTCCCTGGGGGATGGGGGCTGCGCGTCTGCCTCCTTCAAGAGACCCC
AGCAGAGTTAGAGGGGTTCCAGCCCAACCTGTTGCAGCGGGACAGATTGTAATGGAATGAATGTGGGCAGCTTAAGGCG
AGCGAATAGGGGAAGTCCTCTGAAAATCCGGGTGGGAGTGAATGGTGATGGCTGTGGAGAGGCAGCACGGAGCCGACGC
AGCCCCACATCCCTGCGCAGCGCTGCAGAGGCGTGCAGGCAGCAATCTCCTGCTGAAAACCTTTGAGAAGCCCCATTTG
CCACCGTTTATCCATAGGCCGATTGAGTTCTGAATGTGAAATGTTGGCGTTCCTCTCCCATTGCGGCACGCAGTGGGGG
ACCCACGCGGGCAGATTCTGTGCCGTGTACCCCAATCCTCCTCTCTCCGCCTCAAACCCTTCACGGTGTGCACCGGGCT
TCTTGTCCACGCCGAGGTGACGTGGATCTGTCCCCACGTCCCAACTCCGTCCCTCTGTCCCAGCTCTGTCCCCGTGTCC
ATCCAGGAAGCAGCCACACCGCAGCACCCGGCGGCCTGCGTGCATCGGACCCGCACGGCAGCTCTTTTGCACGGCTCGC
TTGTGGAAATTAGGTGGGATTGACGATGTCTCGTCGCTCTCATTTTCCTTTTCTTTTTTCCTGACGTCCTGCAAGAAAA
AATAACGCCGCAAACCGAACGTTTTCCGGCCCTCAAAGGAGCGGGANGGCGGGCAGTGCGGCGCTTGGGAGGGGCGACG
GAACCATTTCTGCTCATTTGATTCAACGCCCTTGACTTCACATCTCAGAGAGCCAGAAAAAAAAAAAGGGAAAAAAAAT
TC
CommentsImages and probe sequence provided by Claire Anderson.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Early Mesoderm
Epiblast
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
 
7-12
stage 8
stage 8
stage 9
stage 11
stage 12
stage 12
stage 12
stage 12
stage 12
Atria
Dermomyotome
Ectoderm
Extraembryonic Blood Vessels
Head Mesenchyme
Heart
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Pharynx
Sclerotome
Somatic Mesoderm
Splanchnic Mesoderm
Ventricles
Widespread Expression
 

Entry 3

GEISHA IdMEF2D.Trevers.2023Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CCTGAACTCATCCTGCTCCAGGCCACAGGGAGGTCCCTGGGGGATGGGGGCTGCGCGTCTGCCTCCTTCAAGAGACCCC
AGCAGAGTTAGAGGGGTTCCAGCCCAACCTGTTGCAGCGGGACAGATTGTAATGGAATGAATGTGGGCAGCTTAAGGCG
AGCGAATAGGGGAAGTCCTCTGAAAATCCGGGTGGGAGTGAATGGTGATGGCTGTGGAGAGGCAGCACGGAGCCGACGC
AGCCCCACATCCCTGCGCAGCGCTGCAGAGGCGTGCAGGCAGCAATCTCCTGCTGAAAACCTTTGAGAAGCCCCATTTG
CCACCGTTTATCCATAGGCCGATTGAGTTCTGAATGTGAAATGTTGGCGTTCCTCTCCCATTGCGGCACGCAGTGGGGG
ACCCACGCGGGCAGATTCTGTGCCGTGTACCCCAATCCTCCTCTCTCCGCCTCAAACCCTTCACGGTGTGCACCGGGCT
TCTTGTCCACGCCGAGGTGACGTGGATCTGTCCCCACGTCCCAACTCCGTCCCTCTGTCCCAGCTCTGTCCCCGTGTCC
ATCCAGGAAGCAGCCACACCGCAGCACCCGGCGGCCTGCGTGCATCGGACCCGCACGGCAGCTCTTTTGCACGGCTCGC
TTGTGGAAATTAGGTGGGATTGACGATGTCTCGTCGCTCTCATTTTCCTTTTCTTTTTTCCTGACGTCCTGCAAGAAAA
AATAACGCCGCAAACCGAACGTTTTCCGGCCCTCAAAGGAGCGGGANGGCGGGCAGTGCGGCGCTTGGGAGGGGCGACG
GAACCATTTCTGCTCATTTGATTCAACGCCCTTGACTTCACATCTCAGAGAGCCAGAAAAAAAAAAAGGGAAAAAAAAT
TC
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XIII
Ubiquitous
ubiquitous
1-3
stage 3
Extraembryonic Mesoderm
Primitive Streak
Ubiquitous
extraembryonic mesoderm
primitive streak (strongest anteriorly) / posterior extraembryonic mesoderm / weaker elsewhere
4-6
stage 6
Headfold
Heart
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
head fold / prospective heart mesoderm / paraxial mesoderm / primitive streak / weaker in neural plate
7-8
stage 8
Heart
Neural Plate/Tube
Primitive Streak
Somites
anterior neural plate / heart mesoderm / somites / primitive streak
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.4344

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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