GEISHA - A Chicken Embryo Gene Expression Database
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MITF
melanogenesis associated transcription factor

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolMITF
Official Full Namemelanogenesis associated transcription factor
CGNC ID49531
also known asCMI9, microphthalmia-associated transcription factor, Mitf, microphthalmia-associated transcription factor
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205029
PolypeptideNP_990360
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.275
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4286ENSG00000187098MIM:103500MIM:156845
Mouse17342ENSMUSG00000035158All phenotypic alleles (31):Targeted, other(5) Transgenic(2) Spontaneous(13) Chemically induced(7) Radiation induced(3) Other(1) MGI:104554
Xenopus100101790, 373794, 100337579484961
Zebrafish100332720, 30080, 114833ENSDARG00000003732, ENSDARG00000037833ZDB-GENE-990910-11, ZDB-GENE-010919-1ZFIN:ZDB-GENE-990910-11, ZFIN:ZDB-GENE-010919-1
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395886
Ensembl Gene
KEGGgga:395886

Entry 1

GEISHA IdChEST504n18Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
TGTGGGCGTGCGGGAGCTGAGCGGCTCCGAGCGGCGCGGCGGTCACCTCGCGGCTCTCCTCTCGCGGCGGCGACGATGC
AGGCGGAGTCGGGGATCGTGCCGGACTTCGAGGTGGGCGAGGAGTTCCACGAGGAGCCCAAGACGTACTACGAGCTGAA
GAGTCAGCCCCTCAAGAGCAGCAATTCCGAGCATCCTGGCGCTTCCAAGCCTCCCTTAAGCTCCTCCAGCATGACCTCA
CGAATCCTGCTACGGCAGCAGCTCATGCGTGAGCAGATGCAGGAGCAGGAGCGTCGGGAGCAGCAGCAGAAGCAGCAAG
CAGCCCAGTTCATGCAACAGAGAGTTCCCGTCAGCCAGACACCTGCCATCAACGTCAGCGTGCCCGCCAGCCTGCCCCC
TGCCACGCAGGTACCCATGGAGGTCCTCAAGGTGCAGACTCACCTTGAGAATCCAACCAAATACCATATTCAGCAAGCT
CAGCGGCAGCAGGTAAAGCAGTACCTCTCTACCACTCTAGCAAATAAACACGCCAACCAAGCCCTGAGCTTGCCATGTC
CAAACCAGCCCGGTGATCATGTCATGCCGCCTGGAACTGGAAGCAGTGCGCCCAACAGTCCGATGGCTATGCTCACCCT
CAACTCCAACTGTG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Extraembryonic
Surface Ectoderm
 
7-12
stage 11
Extraembryonic
 
13-18
stage 13
stage 16
stage 17
Blood Vessels
Extraembryonic
Head Mesenchyme
Lateral Plate Mesoderm
Paraxial Mesoderm
Surface Ectoderm
 
19-21
stage 19
stage 21
Amnion
Lateral Plate Mesoderm
Limb Buds
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Surface Ectoderm
Widespread Expression
 

Entry 2

GEISHA IdMitf.Canto-Soler.2006Data SourcePublication
Complete cDNA Template Probeshow
GGATTCTGCTCTGCGGTTCTGCAAACCCTGAGAGCAATGGAGCCCCTGGTAGAAGCTGAGCCGTCTCTCTCTGCTCTTC
CCACAGCAATTCCGAGCATCCTGGCGCTTCCAAGCCTCCCTTAAGCTCCTCCAGCATGACCTCACGAATCCTGCTACGG
CAGCAGCTCATGCGTGAGCAGATGCAGGAGCAGGAGCGTCGGGAGCAGCAGCAGAAGCAGCAAGCAGCCCAGTTCATGC
AACAGAGAGTTCCCGTCAGCCAGACACCTGCCATCAACGTCAGCGTGCCCGCCAGCCTGCCCCCTGCCACGCAGGTACC
CATGGAGGTCCTCAAGGTGCAGACTCACCTTGAGAATCCAACCAAATACCATATTCAGCAAGCTCAGCGGCAGCAGGTA
AAGCAGTACCTCTCTACCACTCTAGCAAATAAACACGCCAACCAAGCCCTGAGCTTGCCATGTCCAAACCAGCCCGGTG
ATCATGTCATGCCGCCTGGAACTGGAAGCAGTGCGCCCAACAGTCCGATGGCTATGCTCACCCTCAACTCCAACTGTGA
AAAAGAGGGATTTTATAAATTTGAAGAGCAAAGCAGGGTCGAGAGTGAGTGCCCGGCTCTGAATACCCACTCACGAGCA
TCATGCATGCAGATGGATGATGTGATTGATGACATAATTAGTCTGGAATCAAGTTACAATGAAGAAATCCTTGGCTTGA
TGGACCCAGCCTTGCAAATGGCAAATACGTTACCAGTGTCTGGGAATTTGATTGACCTTTATGGCAACCAAAGCATGCC
TCCTCCAGGACTTAACATCAGCAACTCCTGTCCAGCTAATCTTCCTAATATAAAAAGGGAGCTCACAGAGTCAGAAGCG
AGAGCACTGGCTAAGGAGAGGCAAAAGAAAGACAATCACAACTTGATTGAACGAAGAAGAAGATTTAATATTAATGACC
GTATAAAAGAACTGGGCACCTTGATACCCAAATCAAACGACCCGGATATGCGCTGGAATAAGGGAACTATTCTAAAAGC
ATCAGTGGACTACATCCGTAAGCTGCAAAGAGAGCAGCAACGCACGAAGGAACTTGAGAACAGACAGAAGAAATTGGAA
CACGCCAACAGGCACCTGCTGCTCAGAATACAGGAACTTGAGATGCAAGCTCGGGCACATGGACTGTCCCTTGTTCCAT
CCACAGGCATTTGCTCCCCTGATATGGTCAACAGGGTCATCAAACAAGAACCTGTGCTGGACAACTGCAACCAAGACCT
CATGCCGCACCACACAGACCTGTCTTGCACTACCACCCTTGATCTCACTGATGGTACCATCACCTTCAGTGACAACCTC
GGAAATGTGACTGAACCAACTGGCACTTACAGTGTTCCTGCAAAAATGGGATCCAAACTGGAAGACATCTTGATGGACG
ATACCCTCTCCCCCGTAGGAGTAACTGACCCACTGCTTTCCTCTGTGTCTCCTGGAGCATCGAAAACGAGTAGCAGGCG
GAGCAGCGTGAGCATGGAGGACACTGATCATGCTTGTTAGCAAATACTTGGCACGCCTTTCATAAACTGCTTTGGTTCT
TGATCAGTAGATTAAATATTTTGCCTTTTGTAGAATTTTTTTGATTTTTTTTTTCTTGTGCTTCATCGGTAGCCCAGTG
TGTGCGTGTGTGTATATATTATATATATAGGATTTTTTTTAGAATTTTTGTGAAGAAACTTGTAAATTCTATTTTAAAA
CTACCAATGCCTCCAATTATATTGTACAGCATATGTACAGTATCTGTGAACTGGATTCGACAAGAACTTTGAACTGGTC
AAATCTACTCAAAGCAATAGAATTACAAATGAAGAGTCTGCTTCTATTTGGGGGGAAGGGGGAATCATAGAATTGTAAA
TGCAACCTATTTACGTGGAGACAAAATGTAAAGTTACAGAATGTAAAGATACCAAAAAAGAAGTCCAATTTGTAATTGT
ATTGATTTAATAGTGCTGCCTTAAAGATACAGTGTCTCTCAAACTTTGATCCTTATAGACAAGTGTTTAGGGAAGAAAA
AAAGCAAACCACTCCGTTCCATTCAGAATACCAGTAATGACAAAAGTGTTAAGAAATCCTCTTTGTGTTGATGGTGATA
TAAAAAGCTCTTGCTGAAAATGAAATAGAAATTGCAGGGAGATGCGAGTCCCTTCCTCAGAGTGCTCTTTGATTTTACT
CTGAGCTGATTTGGGTTTTCCTTTTGATCATGGTACAACTTTCTTTTAGGCTTTAGTTTTGTTTTGTAACAGACGTTGA
TGGCTTGCCACCAATAAACCGAGAAAGGAGCACTATAGGTTGGTATGCACTCTTTGGACGATAATAATCGATAGGTTTT
AACAGCTGGGCACATGACGTTGTACATATCTAATTGGCTTTATTTTTTTTTTAATTGCATTGTACAGTTTATTCTGATT
TGCATGGGTTCCTCAGTTACCTTCAGCCTTTCGTTTTAAATATATTTGTATTTCCTTTGTAAGAATTTGCCTCTTAATA
TTGCAGCATTTCTTTTTGACATTTTAAAAACTCATTGGAAGTTTTCTGCGTTCTTTGTAAACACTTGAAAGGAAGCTTT
TATGCTGGGTTCTGTGTTTTAAGAGAGATTCTGAGAATATTTTGTATATTACAGTCTCACTTTGAAAATGTTTTTAAAC
ACGTTTAAGGTAGAGTTCAAATGTAGATTAGGTAATAAAACGACTTGTAGAGAAACTGAACTTACATATTTATTTTTAG
TGATACAGAAGAAATAGTGATATGCTTGGAAACATAACTATGTAGTAGATATACCCGTCATAGTAATTTGTGTTTTATT
TCAGCACTGGCGCTGACAT
CitationCanto-Soler MV, Adler R. Optic cup and lens development requires Pax6 expression in the early optic vesicle during a narrow time window. Dev Biol. 2006 Jun 1;294(1):119-32. Epub 2006 Mar 27.
CopyrightReprinted from Developmental Biology, 294, Issue 1, M. Valeria Canto-Soler and Ruben Adler, Optic cup and lens development requires Pax6 expression in the early optic vesicle during a narrow time window, 119-132, 2006, with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights
CommentsThe authors said: Probes were generated from cDNAs generously provided by the following investigators: cMitf (Makoto Mochii, National Institute for Basic Biology, Okazaki, Japan). As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205029).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Retina
 

Entry 3

GEISHA IdMITF.Halilagic.2007Data SourcePublication
Complete cDNA Template Probeshow
GGATTCTGCTCTGCGGTTCTGCAAACCCTGAGAGCAATGGAGCCCCTGGTAGAAGCTGAGCCGTCTCTCTCTGCTCTTC
CCACAGCAATTCCGAGCATCCTGGCGCTTCCAAGCCTCCCTTAAGCTCCTCCAGCATGACCTCACGAATCCTGCTACGG
CAGCAGCTCATGCGTGAGCAGATGCAGGAGCAGGAGCGTCGGGAGCAGCAGCAGAAGCAGCAAGCAGCCCAGTTCATGC
AACAGAGAGTTCCCGTCAGCCAGACACCTGCCATCAACGTCAGCGTGCCCGCCAGCCTGCCCCCTGCCACGCAGGTACC
CATGGAGGTCCTCAAGGTGCAGACTCACCTTGAGAATCCAACCAAATACCATATTCAGCAAGCTCAGCGGCAGCAGGTA
AAGCAGTACCTCTCTACCACTCTAGCAAATAAACACGCCAACCAAGCCCTGAGCTTGCCATGTCCAAACCAGCCCGGTG
ATCATGTCATGCCGCCTGGAACTGGAAGCAGTGCGCCCAACAGTCCGATGGCTATGCTCACCCTCAACTCCAACTGTGA
AAAAGAGGGATTTTATAAATTTGAAGAGCAAAGCAGGGTCGAGAGTGAGTGCCCGGCTCTGAATACCCACTCACGAGCA
TCATGCATGCAGATGGATGATGTGATTGATGACATAATTAGTCTGGAATCAAGTTACAATGAAGAAATCCTTGGCTTGA
TGGACCCAGCCTTGCAAATGGCAAATACGTTACCAGTGTCTGGGAATTTGATTGACCTTTATGGCAACCAAAGCATGCC
TCCTCCAGGACTTAACATCAGCAACTCCTGTCCAGCTAATCTTCCTAATATAAAAAGGGAGCTCACAGAGTCAGAAGCG
AGAGCACTGGCTAAGGAGAGGCAAAAGAAAGACAATCACAACTTGATTGAACGAAGAAGAAGATTTAATATTAATGACC
GTATAAAAGAACTGGGCACCTTGATACCCAAATCAAACGACCCGGATATGCGCTGGAATAAGGGAACTATTCTAAAAGC
ATCAGTGGACTACATCCGTAAGCTGCAAAGAGAGCAGCAACGCACGAAGGAACTTGAGAACAGACAGAAGAAATTGGAA
CACGCCAACAGGCACCTGCTGCTCAGAATACAGGAACTTGAGATGCAAGCTCGGGCACATGGACTGTCCCTTGTTCCAT
CCACAGGCATTTGCTCCCCTGATATGGTCAACAGGGTCATCAAACAAGAACCTGTGCTGGACAACTGCAACCAAGACCT
CATGCCGCACCACACAGACCTGTCTTGCACTACCACCCTTGATCTCACTGATGGTACCATCACCTTCAGTGACAACCTC
GGAAATGTGACTGAACCAACTGGCACTTACAGTGTTCCTGCAAAAATGGGATCCAAACTGGAAGACATCTTGATGGACG
ATACCCTCTCCCCCGTAGGAGTAACTGACCCACTGCTTTCCTCTGTGTCTCCTGGAGCATCGAAAACGAGTAGCAGGCG
GAGCAGCGTGAGCATGGAGGACACTGATCATGCTTGTTAGCAAATACTTGGCACGCCTTTCATAAACTGCTTTGGTTCT
TGATCAGTAGATTAAATATTTTGCCTTTTGTAGAATTTTTTTGATTTTTTTTTTCTTGTGCTTCATCGGTAGCCCAGTG
TGTGCGTGTGTGTATATATTATATATATAGGATTTTTTTTAGAATTTTTGTGAAGAAACTTGTAAATTCTATTTTAAAA
CTACCAATGCCTCCAATTATATTGTACAGCATATGTACAGTATCTGTGAACTGGATTCGACAAGAACTTTGAACTGGTC
AAATCTACTCAAAGCAATAGAATTACAAATGAAGAGTCTGCTTCTATTTGGGGGGAAGGGGGAATCATAGAATTGTAAA
TGCAACCTATTTACGTGGAGACAAAATGTAAAGTTACAGAATGTAAAGATACCAAAAAAGAAGTCCAATTTGTAATTGT
ATTGATTTAATAGTGCTGCCTTAAAGATACAGTGTCTCTCAAACTTTGATCCTTATAGACAAGTGTTTAGGGAAGAAAA
AAAGCAAACCACTCCGTTCCATTCAGAATACCAGTAATGACAAAAGTGTTAAGAAATCCTCTTTGTGTTGATGGTGATA
TAAAAAGCTCTTGCTGAAAATGAAATAGAAATTGCAGGGAGATGCGAGTCCCTTCCTCAGAGTGCTCTTTGATTTTACT
CTGAGCTGATTTGGGTTTTCCTTTTGATCATGGTACAACTTTCTTTTAGGCTTTAGTTTTGTTTTGTAACAGACGTTGA
TGGCTTGCCACCAATAAACCGAGAAAGGAGCACTATAGGTTGGTATGCACTCTTTGGACGATAATAATCGATAGGTTTT
AACAGCTGGGCACATGACGTTGTACATATCTAATTGGCTTTATTTTTTTTTTAATTGCATTGTACAGTTTATTCTGATT
TGCATGGGTTCCTCAGTTACCTTCAGCCTTTCGTTTTAAATATATTTGTATTTCCTTTGTAAGAATTTGCCTCTTAATA
TTGCAGCATTTCTTTTTGACATTTTAAAAACTCATTGGAAGTTTTCTGCGTTCTTTGTAAACACTTGAAAGGAAGCTTT
TATGCTGGGTTCTGTGTTTTAAGAGAGATTCTGAGAATATTTTGTATATTACAGTCTCACTTTGAAAATGTTTTTAAAC
ACGTTTAAGGTAGAGTTCAAATGTAGATTAGGTAATAAAACGACTTGTAGAGAAACTGAACTTACATATTTATTTTTAG
TGATACAGAAGAAATAGTGATATGCTTGGAAACATAACTATGTAGTAGATATACCCGTCATAGTAATTTGTGTTTTATT
TCAGCACTGGCGCTGACAT
CitationHalilagic A, Ribes V, Ghyselinck NB, Zile MH, Dollé P, Studer M. Retinoids control anterior and dorsal properties in the developing forebrain. Dev Bio 2007 Mar 1;303(1):244-58
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_205029.1). Images are quail, but sequence and map shown are chick.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 14
stage 14
Eye
quail embryo
19
stage 19
Eye
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.275

Mouse

EmageMGI:104554
EurexpressMGI:104554
MGI GXDMGI:104554

Frog

Xenbase484961

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-990910-11, ZDB-GENE-010919-1
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