Geisha

home

|

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

MTA1
metastasis associated 1

Gene

Official Symbol	MTA1
Official Full Name	metastasis associated 1
CGNC ID	53548
also known as	metastasis-associated protein MTA1, hypothetical protein LOC429060
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_001012953
Polypeptide	NP_001012971

Gene Expression

In Situ Hybridization

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	40693			FBgn0027951
Human	9112	ENSG00000182979		MIM:603526
Mouse	116870	ENSMUSG00000021144	All phenotypic alleles (3):Targeted, other(2) Gene trapped(1)	MGI:2150037
Xenopus	496581, 447758			1007625
Zebrafish	794477	ENSDARG00000007198

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	429060
Ensembl Gene	ENSGALG00000002803
KEGG	gga:429060

Entry 1

GEISHA Id	ChEST282k3	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show TCCTCTTCTGACATACGGAGAGCTAGAACCCTTCTTTTGTGACCGAGCTCTCGTTGCGAAGCCGTTTTTACGAGGCTGT GTTGTAAGTTTGGGTTTGTTTTGTTTTGTTTTTGTTTTTTAATTTTGTGGACGGTGCCATTTTTTATTTCATTTATATG ATTTCTTTTGTAGATACATTTCCAACCTCTATCAGATATCTGCTCGTAGGAGCTGGGAGCCAGCCCCGGGTTCAGCCTG TTTGCTTTGGTCCTGCCCCTTATGTTTTTTGGATCATTTTTCGCGGCCAGTTGTGCTCCTGCACCAGACAGAAACAACT CAGGCTGAGAAAGGAGTGAGCTAAGAACGGAAGAACCTTGCAGAGCGTTACGCTAACGGTGTGTGCAATGGAGGCCAGG CTGCCGGAGTTGGGTGCCCTTGCTCTATCCATCCCTGGGAGATGTGGCTCATAGCACTTCTCTCTGCGACCAGCAGTTT GCGCGCTGCCTTCTCTCTGACATCTGGAGCCCTACGTGCTGCCGTGCCACCCGCAGCCAGCAGTAGGCCCAGCAGTGTA ATGAATTGCTTTGCTCTGGCTCCAAGAGTCAAGTACACCAATGCCCAGGGACGTTTTGCTT
Comments	No specific expression detected for stages 15-21.

no images

Entry 2

GEISHA Id	MTA1.Trevers.2023	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show GTACAGAAACAACTCAGGCTGAGAAAGGAGTGAGCTAAGAACGGAAGAACCTTGCAGAGCGTTACGCTAACGGTGTGTG CAATGGAGGCCAGGCTGCTGGAGTTGGGTGCCCTTGCTCTATCCATCCCTGGGAGATGTGGCTCATAGCACTTCTCTCT GCGACCAGCAGTTTGCGCGCTGCCTTCTCTCTGACATCTGGAGCCCTATGTGCTGCCGTGCCACCCGCAGCCAGCAGTA GGCCCAGCAGTGTAATGAATTGCTTTGCTCTGGCTCCAAGAGTCAAGTACACCAATGCCCAGGGACGTTNTGCTTAGAA TTCTGAACCTGTTTGTGCATCCGTGGTTTTGGACACGCTTCTCCCAGGACAAAAACCTGGTTTCTCTTACATTGCGTTA CTGTACGTTTCCCATCTGGAAGAGAGTTTAAATTACAGCCGGGTTTTAATTTGAACACGTTGTGTCTGAAGTTCAGTGT TTGTTTTTTTTTCCCCCCCCCCTTGACATTTCTGGGGGTGGAGGTTTCTGGCATCTCTTGAACTTCTTCTGTATTGGCA AGTCTGTATGATTTCTTTCCCATATGTCTTCTCATCGCAGCGCATCTGCTGAATGCCCTGCTCTGTTTTGAAAGGATGT AAACTATCATTGGCAACTTGGTGCTGATCTGTACATGTACCTGCCTCCAGCAGACACAGCATGTAATAACCCCCCAAAA A
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

X-XIV

stage XIII

4-6

stage 4

stage 6

Headfold
Mesoderm
Neural Plate/Tube
Primitive Streak
Ubiquitous

head fold / neural plate / primitive streak and emerging mesoderm / excluded from floor plate
ubiquitous, lower in primitive streak and adjacent regions

7-9

stage 9

Foregut
Head Mesenchyme
Headfold
Neural Plate/Tube
Primitive Streak

neural plate / foregut / head mesenchyme / head fold / primitive streak / excluded from floor plate

all

Mouse

Emage	MGI:2150037
MGI GXD	MGI:2150037

Frog

Xenbase

Fruit Fly

BDGP	FBgn0027951

Zebra Finch

ZEBrA

Zebrafish

ZFIN

Home

|

Contact

University of Arizona

NICHD

National Institute of Health

Hy-Line

© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona