GEISHA - A Chicken Embryo Gene Expression Database
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MYOCD
myocardin

Gene
Official SymbolMYOCD
Official Full Namemyocardin
CGNC ID685
also known asmyocardin
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001080715
PolypeptideNP_001074184
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.37764
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene427790
Ensembl GeneENSGALG00000001021
KEGGgga:427790

Entry 1

GEISHA IdMYOCD.UAlinearData SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CAGCTTTTCTCTTTGGAGGAAGTTAATGGTTTAAGTGAGGGGCGTCTGGATCCGGTCCCCGAGACACCATGACACTCCT
GGGGTCTGAGCACTCCTTGCTGATTCGGAGCAAGTTCAGATCAGTTTTGCAGCTACGGCTTCAGCAGAGAAGGACCCGT
GAGCAGCTGGCAGACCAAGGCATCATGCCACCACTGAAAAGCCCATCCGCATTCCATGAACAACGAAAAAGTCTGGAGC
GAGCCAAGACTGAAGATTATCTCAAGCACAAGATCAGAAGCAGGCCTGAGCGATCAGACCTGGTCAATATGCACATTTT
ACAAGACTCAGCTGCAGAGGGGTCCATTCAGTCCACTCAAATGAAGCTGAAAAGAGCCCGACTGGCAGATGATCTCAAT
GAAAAGATTGCTCTCAGGCCGGGTCCTTTGGAGCTGGTGGAGAAGAATATTATTCCTGTCGACTCAGCTGTGAAAGAGG
CCATAAAAGGCACACAGGTGAACTTCTCCAAGCCACCTGATGCGTTTGCCTTTGAGGAGGACAGCAGCAATGACGGCCT
GTCCCCGGAGCAGGCCAGGAGCGAGGACTCCCAGGGCTCCACAGAGTCGTCGGCAGGCACCAAATCCTCCGAGCTGCCG
CCCTCGGCCCCCTCAGGGCCGGCCCAGGATCACCCCCATGGCATTGAGGGCAACACAGCGGAGCTTGCCTCAGGCCAGA
GCGGCCAGTGCAACAGCCCCAAGCAAGCAGTGGGGCAGGACAGCCCACCTCTCCCAGTGCCCTCCGTGGTGAAGTCAAA
ATCATCCAGTGATAGCAAGAACCGTCACAAAAAACCCAAGGACACTAAGCCCAAGGTGAAGAAGCTGAAATATCACCAG
TACATCCCTCCAGACCAGAAGGCAGAGAAGTCCCCTCCACCTATGGACTCTGCATATGCAAGACTCCTCCAGCAGCAGC
AGCTCTTTCTGCAGCTGCAGATCCTCAGCCAGCAGCAACAGCAACAACAGCAGCAACAGCAGCAACAGCAGCAGCACTT
CAACTACCCAGGGATGCACCAAGGCCAGATAAAGCAATCAAATGAGCAAATGATCAAAAGTTCAAATGCTTCATCAACT
TCTGTCAGCAACACCCCTCTTTCTCCTGTGAAAACCACCTTTTCAGGCCAGACTTGTGTCTCATCTATCAAGCCAGGCC
CTCTGCCATCTAACCTGGATGATCTGAAAGTGTCAGAACTGAGACAGCAGCTCCGAATAAGAGGCCTGCCTGTATCAGG
TACCAAAGCAGCACTGATGGAACGGCTACGGCCCTTCCAGGAGTGCAGCAGCAATGCGGTGCCAAATTTCAGTGAGATC
ACAACTGTCACCTTTCCAGTCACTCCAACAAGCACCTTGTCAAGTTACCAGTCGCAGTCTTCCACTGGCATGTTATCAA
ACGGCTTCTACCACTTCGGCAGCACCAGTTCCACTCCACCCATCTCTCCAGCCTCCTCTGACCTCTCTGTGAGCGGCTC
TCTGCCAGACACATTCAACGACGGGCCCATGTCTTCTCCACAGTTTGGTCTTCAGCCATCTCCAGTTCACGGTAGTGCT
GAGGAAAGCCTGATGAGCAGCATGAACGGAGGGAGCATCCAGCTGGAGCTGGAAGGGATTGACACAGAGAAGGACAAAA
TGCTGGTGGAGAAGCAGAAGGTCATCAATGAATTGACGTGGAAGCTGCAACAAGAGCAGAGGCAGGTAGAAGAACTAAG
GATGCAACTGCAGAAGCGAAAGAGAAGCAATGGCCTTGAGGAGAAACAGCAGCCCTCCCAGCATTTCTTTGGTGTTCCC
ATCAAGCAAGAAAATGCAGTGTCCAGCTGCCCATTTGCATCCAAACAAACTGCCTTGAAAGGCCAAGCCAGCAGCTCGG
ATAAGTTAAGTAACTGTGGGGTGCCACAGCTGTCTCACATTGTAAATAGCCACTGCTTGGAGCCTGCGGGGCAAAGTAC
CATCACCTCCTCGACATTCCTGAGCCCGCAGTGCTCCCCCCAGCACTCTCCACTCGGGGCTGCAAAGAGCCCTCAACGC
ATCAGCCTGCCACCGTCCCCCAACAGCCACTATCTCCTGGCGGTGTCCCCTGGCTCACAGGCAGAAGGGCGCAGCGCAT
CGCCCCAGGCCAGCAGTTGCCTTCGCACGGCATCGCAGATGACTCGAAGTCAGCAGATGGACGAACTCCTGGACGTGCT
GATTGAGAGCGGAGAAATGCCAGCCAACGCCAAGGAAGATCGGTCCTGCCTCCAGAAAGTACCTCAGATAACAGTGTCT
ACAGGGAACTCCAGCACTCCGCTCCCAAAGTCATCTGCTCCATTCGAACAGGTCTCCTCCACCCAGCTCCCATTCGAGC
ACTGTCCAGGCGGTGGTGACGCTCACCTCGAGGTCCTGCTGAATGCCCACAGCCCGCTGGGGAGAGTCGGTGAAATCAC
CCTGCTGAAGATGGGAGGAGAGGAGTCCCACTTCGAAGGGATGATAGAGGGGTTCTCCAGCAAAGCCGCAGATGAACTG
CTCACCTCCCAGGAGATTTTACAGACTCCCCTCTCACCCATGGAAACGCAGCTCTCCCCTTCCCCTGCTGATGGCTCCG
GTTTACAAATGAGTTTCACTGAATCTCCATGGGAAACGATGGAGTGGCTGGACCTCACCCCCCCCAGCTCTGCCACTGG
CTTCAGCTCACTCACTCCTGCAGGCCCCAGCATCTTCAACATTGATTTCCTGGATGTTACTGATCTCAATTTAAACACC
AGCATGGACCTCCACCTGCAGCAGTGGTGAACAGGAGGGCAGTGGAGGCAGAGTACTGCGAGCCCACAGCAGCCAGCGC
AGTGTTTCCGTCATGCTGGAGAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 6
Area Opaca
Cardiovascular
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Splanchnic Mesoderm
 
7-12
stage 7
stage 8
stage 8
stage 8
stage 9
stage 9
stage 9
Anterior Intestinal Portal
Area Opaca
Cardiovascular
Extraembryonic Mesoderm
Heart
Heart Tube
Lateral Plate Mesoderm
Splanchnic Mesoderm
HH 7+/8-
HH 8+/9-
13-18
stage 13
stage 13
stage 13
stage 18
Allantois
Atria
Blood Vessels
Eye
Heart
Myocardium
Outflow Tract
Sinus Venosus
Ventricles
Yolk Sack or Stalk
 

Entry 2

GEISHA IdMYOCD.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATAGCAGCAGCACTTCAACTACCC
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGCTTCTCCACCAGCATTTTGTCCcDNA Template Length669
Forward cDNA Template Probeshow
AGGGGATGCACCAAGGGCCAGATAAAGCAATCAAATGAGCAAATGGATCAAAAGTTCAAATGCTTCATCAACTTCTGTC
AGCAACACCCCTCTTTCTCCTGTGAAAACCACCTTTTCAGGCCAGACTTGTGTCTCATCTATCAAGCCAGGCCCTCTGC
CATCTAACCTGGATGATCTGAAAGTGTCAGAACTGAGACAGCAGCTCCGAATAAGAGGCCTGCCTGTATCAGGTACCAA
AACAGCACTGATGGAACGGCTACGGCCCTTCCAGGAGTGCAGCAGCAATGCGGTGCCAAATTTCAGTGAGATCACAACT
GTCACCTTTCCAGTCACTCCAACAAGCACCTTGTCAAGTTACCAGTCGCAGTCTTCCACTGGCATGTTATCAAACGGCT
TCTACCACTTCGGCAGCACCAGTTCCACTCCACCCATCTCTCCAGCCTCCTCTGACCTCTCTGTGAGCGGCTCTCTGCC
AGACACATTCAACGACGGGCCCATGTCTTCTCCACAGTTTGGTCTTCAGCCATCTCCAGTTCACGGTAGTGCTGAGGAA
AGCCTGATGAGCAGCATGAACGGAGGGAGCATCCAGCTGGAGCTGGAAGGGATTGACACAGAGAAGGACAAAATGCTGG
TGGAGAAGCCTTTAGTGAGGGTTATTTCTAAGAGCAA
CommentsNo expression detected at or before stage 4.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
Unlabeled
No expression detected at or before stage 4.
7-12
stage 11
Blood Vessels
Heart Tube
Outflow Tract
Sinus Venosus
 
13-18
stage 15
stage 16
Blood Vessels
Outflow Tract
Sinus Venosus
 
19-24
stage 20
stage 22
stage 24
Extraembryonic
Head Mesenchyme
Heart
 

Entry 3

GEISHA IdMYOCARDIN.Chen.2008Data SourcePublication
Complete cDNA Template Probeshow
CAGCTTTTCTCTTTGGAGGAAGTTAATGGTTTAAGTGAGGGGCGTCTGGATCCGGTCCCCGAGACACCATGACACTCCT
GGGGTCTGAGCACTCCTTGCTGATTCGGAGCAAGTTCAGATCAGTTTTGCAGCTACGGCTTCAGCAGAGAAGGACCCGT
GAGCAGCTGGCAGACCAAGGCATCATGCCACCACTGAAAAGCCCATCCGCATTCCATGAACAACGAAAAAGTCTGGAGC
GAGCCAAGACTGAAGATTATCTCAAGCACAAGATCAGAAGCAGGCCTGAGCGATCAGACCTGGTCAATATGCACATTTT
ACAAGACTCAGCTGCAGAGGGGTCCATTCAGTCCACTCAAATGAAGCTGAAAAGAGCCCGACTGGCAGATGATCTCAAT
GAAAAGATTGCTCTCAGGCCGGGTCCTTTGGAGCTGGTGGAGAAGAATATTATTCCTGTCGACTCAGCTGTGAAAGAGG
CCATAAAAGGCACACAGGTGAACTTCTCCAAGCCACCTGATGCGTTTGCCTTTGAGGAGGACAGCAGCAATGACGGCCT
GTCCCCGGAGCAGGCCAGGAGCGAGGACTCCCAGGGCTCCACAGAGTCGTCGGCAGGCACCAAATCCTCCGAGCTGCCG
CCCTCGGCCCCCTCAGGGCCGGCCCAGGATCACCCCCATGGCATTGAGGGCAACACAGCGGAGCTTGCCTCAGGCCAGA
GCGGCCAGTGCAACAGCCCCAAGCAAGCAGTGGGGCAGGACAGCCCACCTCTCCCAGTGCCCTCCGTGGTGAAGTCAAA
ATCATCCAGTGATAGCAAGAACCGTCACAAAAAACCCAAGGACACTAAGCCCAAGGTGAAGAAGCTGAAATATCACCAG
TACATCCCTCCAGACCAGAAGGCAGAGAAGTCCCCTCCACCTATGGACTCTGCATATGCAAGACTCCTCCAGCAGCAGC
AGCTCTTTCTGCAGCTGCAGATCCTCAGCCAGCAGCAACAGCAACAACAGCAGCAACAGCAGCAACAGCAGCAGCACTT
CAACTACCCAGGGATGCACCAAGGCCAGATAAAGCAATCAAATGAGCAAATGATCAAAAGTTCAAATGCTTCATCAACT
TCTGTCAGCAACACCCCTCTTTCTCCTGTGAAAACCACCTTTTCAGGCCAGACTTGTGTCTCATCTATCAAGCCAGGCC
CTCTGCCATCTAACCTGGATGATCTGAAAGTGTCAGAACTGAGACAGCAGCTCCGAATAAGAGGCCTGCCTGTATCAGG
TACCAAAGCAGCACTGATGGAACGGCTACGGCCCTTCCAGGAGTGCAGCAGCAATGCGGTGCCAAATTTCAGTGAGATC
ACAACTGTCACCTTTCCAGTCACTCCAACAAGCACCTTGTCAAGTTACCAGTCGCAGTCTTCCACTGGCATGTTATCAA
ACGGCTTCTACCACTTCGGCAGCACCAGTTCCACTCCACCCATCTCTCCAGCCTCCTCTGACCTCTCTGTGAGCGGCTC
TCTGCCAGACACATTCAACGACGGGCCCATGTCTTCTCCACAGTTTGGTCTTCAGCCATCTCCAGTTCACGGTAGTGCT
GAGGAAAGCCTGATGAGCAGCATGAACGGAGGGAGCATCCAGCTGGAGCTGGAAGGGATTGACACAGAGAAGGACAAAA
TGCTGGTGGAGAAGCAGAAGGTCATCAATGAATTGACGTGGAAGCTGCAACAAGAGCAGAGGCAGGTAGAAGAACTAAG
GATGCAACTGCAGAAGCGAAAGAGAAGCAATGGCCTTGAGGAGAAACAGCAGCCCTCCCAGCATTTCTTTGGTGTTCCC
ATCAAGCAAGAAAATGCAGTGTCCAGCTGCCCATTTGCATCCAAACAAACTGCCTTGAAAGGCCAAGCCAGCAGCTCGG
ATAAGTTAAGTAACTGTGGGGTGCCACAGCTGTCTCACATTGTAAATAGCCACTGCTTGGAGCCTGCGGGGCAAAGTAC
CATCACCTCCTCGACATTCCTGAGCCCGCAGTGCTCCCCCCAGCACTCTCCACTCGGGGCTGCAAAGAGCCCTCAACGC
ATCAGCCTGCCACCGTCCCCCAACAGCCACTATCTCCTGGCGGTGTCCCCTGGCTCACAGGCAGAAGGGCGCAGCGCAT
CGCCCCAGGCCAGCAGTTGCCTTCGCACGGCATCGCAGATGACTCGAAGTCAGCAGATGGACGAACTCCTGGACGTGCT
GATTGAGAGCGGAGAAATGCCAGCCAACGCCAAGGAAGATCGGTCCTGCCTCCAGAAAGTACCTCAGATAACAGTGTCT
ACAGGGAACTCCAGCACTCCGCTCCCAAAGTCATCTGCTCCATTCGAACAGGTCTCCTCCACCCAGCTCCCATTCGAGC
ACTGTCCAGGCGGTGGTGACGCTCACCTCGAGGTCCTGCTGAATGCCCACAGCCCGCTGGGGAGAGTCGGTGAAATCAC
CCTGCTGAAGATGGGAGGAGAGGAGTCCCACTTCGAAGGGATGATAGAGGGGTTCTCCAGCAAAGCCGCAGATGAACTG
CTCACCTCCCAGGAGATTTTACAGACTCCCCTCTCACCCATGGAAACGCAGCTCTCCCCTTCCCCTGCTGATGGCTCCG
GTTTACAAATGAGTTTCACTGAATCTCCATGGGAAACGATGGAGTGGCTGGACCTCACCCCCCCCAGCTCTGCCACTGG
CTTCAGCTCACTCACTCCTGCAGGCCCCAGCATCTTCAACATTGATTTCCTGGATGTTACTGATCTCAATTTAAACACC
AGCATGGACCTCCACCTGCAGCAGTGGTGAACAGGAGGGCAGTGGAGGCAGAGTACTGCGAGCCCACAGCAGCCAGCGC
AGTGTTTCCGTCATGCTGGAGAA
CitationChen JF, Wang S, Wu Q, Cao D, Nguyen T, Chen Y, Wang DZ. Myocardin Marks the Earliest Cardiac Gene Expression and Plays an Important Role in Heart Development. Anat Rec (Hoboken). 2008 October; 291(10): 1200–1211.
CopyrightCopyright © 2008 Wiley-Liss, Inc.
CommentsAuthors indicated:Two different cDNA fragments, which cover distinct portions of the chick myocardin transcripts (ORF and 3′ UTR), were used as templates for in vitro transcription to make antisense DIG-labeled riboprobes. These two probes were used to hybridize with staged chick embryos and yielded similar results. The sequence for the total mRNA is included here. NM_001080715.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
stage 10
stage 11
stage 11
stage 12
stage 12
Heart Tube
Outflow Tract
Ventricles
 
13-18
stage 13
stage 13
stage 15
stage 15
stage 18
stage 18
Atria
Heart
Heart Tube
Outflow Tract
Ventricles
 
19-21
stage 21
stage 21
stage 21
Heart
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.37764

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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