GEISHA - A Chicken Embryo Gene Expression Database
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MEOX1
mesenchyme homeobox 1

Gene
Official SymbolMEOX1
Official Full Namemesenchyme homeobox 1
CGNC ID810
also known asGGMOXR1, homeobox protein MOX-1|Mox-1 related protein|mesenchyme homeo box 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204765
PolypeptideNP_990096
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.288
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4222ENSG00000005102MIM:600147
Mouse17285ENSMUSG00000001493All phenotypic alleles (5):Targeted, knock-out(1) Targeted, other(1) Gene trapped(2) Transgenic(1) MGI:103220
Xenopus
Zebrafish436723ENSDARG00000007891ZDB-GENE-040718-149ZFIN:ZDB-GENE-040718-149
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395533
Ensembl GeneENSGALG00000001191
KEGGgga:395533

Entry 1

GEISHA IdMox-1Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
ATCGGCCTTGGGACCCTCTTAGGGGCGATCGCCTCCTTCACCTATTCGGGACAATGAAGACCTTTAGAAGAGTTCCCCA
ACTAACAAACCTCCAACCTCACAAACCCCCCAGCCAAAGTGTCGCTTAGGGAGGAAATCTGGGCTGTCAAATTTGGAAA
CATTTTCCCCTCCGCTCCTCTCCTGCTCGAGGAACCCGAGTGACGAACGCGGGACGAGGATGGACCCCACCGGAGGCAG
CTGCATGCGCAGCCCCCAACCCCCAGCCCCACTCTGGGGGTGCCTACGGGGCGCTGATGTCCCCACAGCCCCAGGGTTG
GGTCACTGCCCCCCGACCCCTTTCTCCTTCCACCCCAAGGCGGATTTTGCTGCTTATTCTGAATTCTCAGCCTCCTGCT
TGCTGAGCGCTGCCCACTGCGTCCCACCCGAGGAGCAACCGCCACCGTTCCGTCCCCATCCTGAGTGGCAGCAAACAGC
AACAGAGGCCCGGAGACTGCTGAGCCCAGGGCTGGCGTTGGCCTCTGGGGATGCAGAGAGCCCCAACCTCGTGAGCACA
GCAGTGGCTGTAAGTGAAGATTACAAAGTGCCGGTAAACAGCGGGATGGAGACGGAGAGAAAGGCATCCAAAAGGAAAA
AGGAGCACTCAGAAAGCCAGCCCTCCAGCAGCAAGGCAGAAGGCAGCAGCAGGTCGCGGAAGGAGAGGACAGCGTTCAC
CAAGGAGCAGCTGAGGGAGCTGGAGGCAGAATTTGCCCACCACAATTACCTGACAAGGCTCAGGAGATACGAGATCGCT
GTGAACCTGGACCTCACCGAGAGACAGGTCAAAGTGTGGTTCCAGAATAGAAGGATGAAGTGGAAGCGCGTTAAGGGGG
GGCAACCAGTGTCCCCTCCTGAGCCCGATGCAGAGGACGCCGACTCCACCACATCCCCCAGCTCCGAGTAGTGCCATAA
AGAGATGCTTGGAGAGGGTGTGACACTGCAGAAGGACACTGCAGCTCCATAGGGTGGCCCTGTGGGGCACGGACTGAGA
GGTGCGCAGTGCTGGAACTGGCGGAGGGAAATGGAAAGCACAAAATAAGCCAAAGGAGAGCAGGACTTTGAGCTTTGTG
TGAATGGAACTGTCTTACTGCCATAGGGGTACCTTCACCAAAAGGAGAAAAAGAAAAAAGATAAAAACCACTGTATATA
TAGCAGGAGTAATGCTGTTTAGGCTCCCAAATGCTCAGAAAGTATGAGTTATCAGTTAGAAAGGGACCAGAGGGTGATA
ACACAGCTCTGTTCACCTCCAGCCTTTCCCTGGTCACTTCAGCTCATCCTTCACTTGGACTTGGGCTCTGAGAATCACT
GAGGTTGGAATAGACCTCTCAGAACCCCAAGTCCAACCCCAACCCATCCCACCGTGCCCACTGACCATGTCTCTACGTG
CCACATTCCCCACATGGGGAGGAACACCTCCAGGGATGGGAACACCCCACCCCCTGAGCAGCTGTGCCAATACCCGACC
TCTCTTCCTGAGAACAAATTTCACCTCACATCCACCCTCAAAGCAGCCCTTACCAAACGGCCCCTGCATCATTTCCATC
CTTCCACTCTGGTTTGCTTCCCTATGTGATCATCTCCACCTCTGAAGGTATCCGACTGATCCCAGGACACTTTAAAGCC
AATTTCCAAGTTTAAAGAGTGCATAAAAGCAGCTTTCTAGCATAGGATGACCACAGCACCCAGACGTGAACGCTCCTTC
CCTTGCACACTGGTCCTCTCAACCCATACCTGTAATATAGCTAATGATTACAGTTTAGGAAAGCATAGTGTCTGTTCCC
ATATCTTCTGTCTTTTTGTTTAACGTTTTCTAATGCAACTTTATCATATTTTAAACAGAACTCTACACTGGCATGTCAT
AGAATGGCTATTAAACACGACTTTTGGTATTCTCA
CommentsImages provided by Raymond Runyan
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 7
stage 8
stage 9
Mesoderm, early
Paraxial Mesoderm
Somites
 
13-14
stage 14
  

Entry 2

GEISHA IdMeox1.Reijntjes.2007Data SourcePublication
Complete cDNA Template Probeshow
CAGGGTTGGGTCACTGCCCCCCGACCCCTTTCTCCTTCCACCCCAAGGCGGATTTTGCTGCTTATTCTGAATTCTCAGC
CTCCTGCTTGCTGAGCGCTGCCCACTGCGTCCCACCCGAGGAGCAGCCGCCACCGTTCCGTCCCCATCCTGAGTGGCAG
CAAACAGCAACAGAGGCCCGGAGACTGCTGAGCCCAGGGCTGGCGTTGGCCTCTGGGGATGCAGAGAGCCCCAACCTCG
TGAGCACAGCAGTGGCTGTAAGTGAAGATTACAAAGTGCCGGTAAACAGCGGGATGGAGACGGAGAGAAAGGCATCCAA
AAGGAAACCAGGAGCACTCAGAAAGCCAGCCCTCCAGCAGCAAGGCAGAAGGCAGCAGCAGGTCGCGGAAGGAGAGGAC
AGCGTTCACCAAGGAGCAGCTGAGGGAGCTGGAGGCAGAATTTGCCCACCACAATTACCTGACAAGGCTCAGGAGATAC
GAGATCGCTGTGAACCTGGACCTCACCGAGAGACAGGTCAAAGTGTGGTTCCAGAATAGAAGGATGAAGTGGAAGCGCG
TTAAGGGGGGGCAACCAGTGTCCCTCCTGAGCCCGATGCAGAGGGACGCCGACTCCAGCAGATCCCCCAAGCTCCGAGT
AGTGCCATAAAGAGATGCTTGGGAGAGGGTGTGACACTTGCAGAAGGACACTGGCAGCTCCAT
CitationReijntjes S, Stricker S, Mankoo BS. A comparative analysis of Meox1 and Meox2 in the developing somites and limbs of the chick embryo. Int J Dev Biol.(2007); 51(8:753-9.
CopyrightReprinted from Int. J. Dev. Biol., 51, Reijntjes S, Stricker S, Mankoo BS, A comparative analysis of Meox1 and Meox2 in the developing somites and limbs of the chick embryo, 753-9, Copyright © 2007 UBC Press, with permission. All rights reserved.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Early Mesoderm
 
7-12
stage 7
stage 7
stage 8
stage 10
Early Mesoderm
Paraxial Mesoderm
Somites
 
13-18
stage 14
stage 16
stage 16
stage 16
Dermomyotome
Sclerotome
Somites
 
19-24
stage 20
stage 20
stage 20
stage 22
stage 22
stage 22
stage 22
Dermomyotome
Eye
Face Mesenchyme
Leg
Leg Muscles
Pharyngeal Arches and Clefts
Somites
Tail
Lateral rectus muscle of the eye
Mandibular arch
25-30
stage 25
stage 25
stage 25
stage 25
Dermomyotome
Eye
Leg Muscles
Limb Buds
Outflow Tract
Somites
Dorsal pre-muscle mass
Ventral pre-muscle mass
31-44
stage 44
stage 44
stage 44
Eye
Limb Buds
Somites
Fig. 1. All images for comparison.
Fig. 2. All images for comparison.
Fig. 3. All images for comparison.

Entry 3

GEISHA IdMEOX1.Wilm.2004Data SourcePublication
Complete cDNA Template Probeshow
ATCGGCCTTGGGACCCTCTTAGGGGCGATCGCCTCCTTCACCTATTCGGGACAATGAAGACCTTTAGAAGAGTTCCCCA
ACTAACAAACCTCCAACCTCACAAACCCCCCAGCCAAAGTGTCGCTTAGGGAGGAAATCTGGGCTGTCAAATTTGGAAA
CATTTTCCCCTCCGCTCCTCTCCTGCTCGAGGAACCCGAGTGACGAACGCGGGACGAGGATGGACCCCACCGGAGGCAG
CTGCATGCGCAGCCCCCAACCCCCAGCCCCACTCTGGGGGTGCCTACGGGGCGCTGATGTCCCCACAGCCCCAGGGTTG
GGTCACTGCCCCCCGACCCCTTTCTCCTTCCACCCCAAGGCGGATTTTGCTGCTTATTCTGAATTCTCAGCCTCCTGCT
TGCTGAGCGCTGCCCACTGCGTCCCACCCGAGGAGCAACCGCCACCGTTCCGTCCCCATCCTGAGTGGCAGCAAACAGC
AACAGAGGCCCGGAGACTGCTGAGCCCAGGGCTGGCGTTGGCCTCTGGGGATGCAGAGAGCCCCAACCTCGTGAGCACA
GCAGTGGCTGTAAGTGAAGATTACAAAGTGCCGGTAAACAGCGGGATGGAGACGGAGAGAAAGGCATCCAAAAGGAAAA
AGGAGCACTCAGAAAGCCAGCCCTCCAGCAGCAAGGCAGAAGGCAGCAGCAGGTCGCGGAAGGAGAGGACAGCGTTCAC
CAAGGAGCAGCTGAGGGAGCTGGAGGCAGAATTTGCCCACCACAATTACCTGACAAGGCTCAGGAGATACGAGATCGCT
GTGAACCTGGACCTCACCGAGAGACAGGTCAAAGTGTGGTTCCAGAATAGAAGGATGAAGTGGAAGCGCGTTAAGGGGG
GGCAACCAGTGTCCCCTCCTGAGCCCGATGCAGAGGACGCCGACTCCACCACATCCCCCAGCTCCGAGTAGTGCCATAA
AGAGATGCTTGGAGAGGGTGTGACACTGCAGAAGGACACTGCAGCTCCATAGGGTGGCCCTGTGGGGCACGGACTGAGA
GGTGCGCAGTGCTGGAACTGGCGGAGGGAAATGGAAAGCACAAAATAAGCCAAAGGAGAGCAGGACTTTGAGCTTTGTG
TGAATGGAACTGTCTTACTGCCATAGGGGTACCTTCACCAAAAGGAGAAAAAGAAAAAAGATAAAAACCACTGTATATA
TAGCAGGAGTAATGCTGTTTAGGCTCCCAAATGCTCAGAAAGTATGAGTTATCAGTTAGAAAGGGACCAGAGGGTGATA
ACACAGCTCTGTTCACCTCCAGCCTTTCCCTGGTCACTTCAGCTCATCCTTCACTTGGACTTGGGCTCTGAGAATCACT
GAGGTTGGAATAGACCTCTCAGAACCCCAAGTCCAACCCCAACCCATCCCACCGTGCCCACTGACCATGTCTCTACGTG
CCACATTCCCCACATGGGGAGGAACACCTCCAGGGATGGGAACACCCCACCCCCTGAGCAGCTGTGCCAATACCCGACC
TCTCTTCCTGAGAACAAATTTCACCTCACATCCACCCTCAAAGCAGCCCTTACCAAACGGCCCCTGCATCATTTCCATC
CTTCCACTCTGGTTTGCTTCCCTATGTGATCATCTCCACCTCTGAAGGTATCCGACTGATCCCAGGACACTTTAAAGCC
AATTTCCAAGTTTAAAGAGTGCATAAAAGCAGCTTTCTAGCATAGGATGACCACAGCACCCAGACGTGAACGCTCCTTC
CCTTGCACACTGGTCCTCTCAACCCATACCTGTAATATAGCTAATGATTACAGTTTAGGAAAGCATAGTGTCTGTTCCC
ATATCTTCTGTCTTTTTGTTTAACGTTTTCTAATGCAACTTTATCATATTTTAAACAGAACTCTACACTGGCATGTCAT
AGAATGGCTATTAAACACGACTTTTGGTATTCTCA
CitationWilm B, James RG, Schultheiss TM, Hogan BL (2004). The forkhead genes, Foxc1 and Foxc2, regulate paraxial versus intermediate mesoderm cell fate. Dev Biol. 2004 Jul 1;271(1):176-89.
CopyrightCopyright © 2004 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204765).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-35
stage 35
stage 35
Intermediate Mesoderm
Paraxial Mesoderm
Somites
Anterior Unsegmented Mesoderm

Entry 4

GEISHA IdMEOX1.Paxton.2010Data SourcePublication
Complete cDNA Template Probeshow
GCTCCCAAATGCTCAGAAAGTATGAGTTATCAGTTAGAAAGGGACCAGAGGGTGATAACACAGCTCTGTTCACCTCCAG
CCTTTCCCTGGTCACTTCAGCTCATCCTTCACTTGGACTTGGGCTCTGAGAATCACTGAGGTTGGAATAGACCTCTCAG
AACCCCAAGTCCAACCCCAACCCATCCCACCGTGCCCACTGACCATGTCTCTACGTGCCACATTCCCCACATGGGGAGG
AACACCTCCAGGGATGGGAACACCCCACCCCCTGAGCAGCTGTGCCAATACCCGACCTCTCTTCCTGAGAACAAATTTC
ACCTCACATCCACCCTCAAAGCAGCCCTTACCAAACGGCCCCTGCATCATTTCCATCCTTCCACTCTGGTTTGCTTCCC
TATGTGATCATCTCCACCTCTGAAGGTATCCGACTGATCCCAGGACACTTTAAAGCCAATTTCCAAGTTTAAAGAGTGC
ATAAAAGCAGCTTTCTAGCATAGGATGACCACAGCACCCAGACGTGAACGCTCCTTCCCTTGCACACTGGTCCTCTCAA
CCCAT
CitationPaxton CN, Bleyl SB, Chapman SC, Schoenwolf GC. Identification of differentially expressed genes in early inner ear development. Gene Expr Patterns. 2010 Jan;10(1):31-43. Epub 2009 Nov 11.
Copyright 2009 Elsevier B.V. All rights reserved.
CommentsThe cDNA template used to generate the probe was obtained by PCR as described 5-gctcccaaatgctcagaaag-3; 5-atgggttgagaggaccagtg-3
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 5
Early Mesoderm
 
7-11
stage 7
stage 7
stage 8
stage 11
Paraxial Mesoderm
 

Entry 5

GEISHA IdMEOX1.Reijntjes.2010Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CAGGGTTGGGTCACTGCCCCCCGACCCCTTTCTCCTTCCACCCCAAGGCGGATTTTGCTGCTTATTCTGAATTCTCAGC
CTCCTGCTTGCTGAGCGCTGCCCACTGCGTCCCACCCGAGGAGCAGCCGCCACCGTTCCGTCCCCATCCTGAGTGGCAG
CAAACAGCAACAGAGGCCCGGAGACTGCTGAGCCCAGGGCTGGCGTTGGCCTCTGGGGATGCAGAGAGCCCCAACCTCG
TGAGCACAGCAGTGGCTGTAAGTGAAGATTACAAAGTGCCGGTAAACAGCGGGATGGAGACGGAGAGAAAGGCATCCAA
AAGGAAACCAGGAGCACTCAGAAAGCCAGCCCTCCAGCAGCAAGGCAGAAGGCAGCAGCAGGTCGCGGAAGGAGAGGAC
AGCGTTCACCAAGGAGCAGCTGAGGGAGCTGGAGGCAGAATTTGCCCACCACAATTACCTGACAAGGCTCAGGAGATAC
GAGATCGCTGTGAACCTGGACCTCACCGAGAGACAGGTCAAAGTGTGGTTCCAGAATAGAAGGATGAAGTGGAAGCGCG
TTAAGGGGGGGCAACCAGTGTCCCTCCTGAGCCCGATGCAGAGGGACGCCGACTCCAGCAGATCCCCCAAGCTCCGAGT
AGTGCCATAAAGAGATGCTTGGGAGAGGGTGTGACACTTGCAGAAGGACACTGGCAGCTCCAT
CitationReijntjes S, Francis-West P, Mankoo BS. Retinoic acid is both necessary for and inhibits myogenic commitment and differentiation in the chick limb. Int J Dev Biol. 2010;54(1):125-34
Copyright© 2009 UBC Press
CommentsThe sequence was obtained from NCBI (acc # BU266520) using the information provided in the publication as described in Reijntjes et al., 2010.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
Limb Buds
A. Stage 22 embryo - shows normal expression
25-30
stage 25
stage 25
Limb Buds
Somites
B. Untreated/Control embryo: shows the normal expression of Meox1.
N. Untreated/Control embryo: Shows the normal expression of Meox1.
31-44
stage 44
stage 44
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.288

Mouse

EmageMGI:103220
EurexpressMGI:103220
MGI GXDMGI:103220

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040718-149
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