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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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NET1
neuroepithelial cell transforming 1

Gene

Official Symbol	NET1
Official Full Name	neuroepithelial cell transforming 1
CGNC ID	6397
also known as	neuroepithelial cell-transforming gene 1 protein\|neuroepithelial cell transforming gene 1
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001030648
Polypeptide	NP_001025819
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.6009

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	10276	ENSG00000173848		MIM:606450
Mouse	56349	ENSMUSG00000021215	All phenotypic alleles (4):Targeted, other(4)	MGI:1927138
Xenopus	780346, 380067			487219
Zebrafish	493607	ENSDARG00000032765	ZDB-GENE-041121-18	ZFIN:ZDB-GENE-041121-18

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	416693
Ensembl Gene	ENSGALG00000008437
KEGG	gga:416693

Entry 1

GEISHA Id	NET1.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	AACTGCTCCTGGAAGACCTG
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGTGGGATGGGTGGTGATAACC	cDNA Template Length	927
Forward cDNA Template Probe	show `CCAACACCTGGCAAAGAAGAAAGAAACGGTGGATTTCAGCTTTGGAGTGCACTTGCAGCACTGGATCTGACTGCAAGGG AGGGACTCTGCCAGGCTCCAGGTGATGGCACAAACTTCTGCTTTAGAAGCCTCAACCACCACACGTGGAAATCTTTCCC AAACCAAAAAGGTGTTCTTCAAAAATCTGCTGTGAAGTGGTCAAAATGCTGACTGACATTGTAAAGAGTGGGCTCAGAG TGGTCCCTTTTGTAAAAACAGACTCCAGTTCAACAGTGTTAACTGTATACCAGTAGCTGCCATTACAACATAAAAAAAA AAAAAAAA`

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 6

Area Pellucida
Epiblast
Extraembryonic Mesoderm
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak

7-12

stage 7

stage 9

stage 10

stage 11

stage 12

Amnion
Anterior Neuropore
Anterior/Second Heart Field
Ear/Otic Placode
Extraembryonic Mesoderm
Head Mesenchyme
Headfold
Heart Tube
Lateral Plate Mesoderm
Neural Crest
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites
Spinal Cord

Dorsal view.
Ventral view.

13-18

stage 15

stage 16

stage 17

Amnion
Endocardium
Eye
Forebrain
Hindbrain
Leg AER
Lung
Midbrain
Notochord
Somites
Wing AER

19-24

stage 23

stage 24

Anterior/Second Heart Field
Cranial Nerve
Endoderm
Forebrain
Gut
Hindbrain
Leg AER
Leg Mesenchyme
Lung
Nasal Placode/Nerve
Oral Pharynx
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Spinal Cord
Wing AER
Wing Mesenchyme

stage 25

Anterior/Second Heart Field
Endoderm
Forebrain
Heart
Hindbrain
Leg AER
Leg Mesenchyme
Midbrain
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Spinal Cord
Widespread Expression
Wing AER
Wing Mesenchyme

Entry 2

GEISHA Id	NET1.Nakaya.2008	Data Source	Publication
Complete cDNA Template Probe	show TGGGAGGCAGGGTTGGAGGCGACCGAGAGGATACTGCATGTGGTAGAAAGCATAGAGAAAAGAAAGCATAGAGAAAAGA AAGCAGCTGAAGCTGATGAGTTCAGGACAGAAGAGGTAGCGACTGTATATAGCTGTATAACGGCGGCACTGCCATGTTC TACAGTGATCCAAAGATTCCCGTGAGATGCCAGCTTGGAACCTGCGCTGCAAAGTGCTGTAGGAAACAAAGTGCTGACA GTTCTGATCAAAGCCAAAACGTTGTTTCTGCAGCATGGCTGAAGGTGACAGGGTGAGGACGGCAATCCCACAACACCAT CCACCATGACACCAACCCGGGAGCCGTAACTCGCAGGTGAAGTTCTGCCTGTTGGCTGTCGGTCGTGTTGGAAATGGGA AGAGGGTGCACACAGACACAAACCCGCACGGTTCTCTGTTAATGTCTTTGTACAGTTTCAAGTGCCAAGTACAATTAAA TTCCTGACGGCAAAAAAAAAAAAAAAA
Citation	Nakaya Y, Sukowati EW, Wu Y, Sheng G. RhoA and microtubule dynamics control cell-basement membrane interaction in EMT during gastrulation. Nat Cell Biol. 2008 Jul;10(7):765-75.
Copyright	© 2008 Macmillan Publishers Limited. All rights reserved.
Comments	The sequence below was obtained from NCBI (acc # NM_001030648.1 - Showing the last 0.5 kb of chick Net1 region from base 2587 to 3087) using the information provided in the publication.