GEISHA - A Chicken Embryo Gene Expression Database
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NGEF
neuronal guanine nucleotide exchange factor

Gene
Official SymbolNGEF
Official Full Nameneuronal guanine nucleotide exchange factor
CGNC ID52249
also known asephexin-1, ephexin-1|ephexin1|guanine nucleotide exchange factor
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001010841
PolypeptideNP_001010841
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.20967
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly39901FBgn0027593
Human25791ENSG00000066248MIM:605991
Mouse53972ENSMUSG00000026259All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:1858414
Xenopus100487663950833
Zebrafish569090ENSDARG00000076179ZDB-GENE-130530-794ZFIN:ZDB-GENE-130530-794
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424744
Ensembl GeneENSGALG00000001505
KEGGgga:424744
GEISHA IdNGEF.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTCCAACTCCAGGTTCAACTTATGG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGGAGAGATGATGGGCACAGACTTGcDNA Template Length724
Forward cDNA Template Probeshow
AAACTTAACTCCAGNTTTCTTCTGGAATGCTGAATCATCTGCTCTGGTTCGGCTCATCTTCCTGAACGCCTTCGTTGCA
TGCTTTCACCACTGTTTTCCAGCTCCTTATGTGCTTCCAGGGCAGATGGTTTCCCATCTCAGATTTCTCTTCCACCTTC
TTCAAAATATTCTGCACCAGTAGCTTGAGCCGAGTGATCCTTTGAAATGGCAGAATCAGGAAGGAAGAAAAGGATAGGC
CTCTGCACATGGGATCCAGCTCCAGCTGTGTGATCACCTCCCGGAAAGCTGGCTTGTCCTGGAGAACNTG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Epiblast
Primitive Streak
Low level expression.
4-6
stage 4
stage 6
Epiblast
Extraembryonic Mesoderm
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
 
7-12
stage 7
stage 10
stage 11
stage 11
Amnion
Extraembryonic Mesoderm
Forebrain
Headfold
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Paraxial Mesoderm
Peripheral Nervous System
Primitive Streak
Rhombomeres
Dorsal View
13-18
stage 15
stage 17
Eye
Hindbrain
Liver
Midgut
Rhombomeres
Spinal Cord
 
19-24
stage 23
Eye
Forebrain
Gut
Hindbrain
Midbrain
Myotome
Spinal Cord
 
25
stage 25
stage 25
Gut
Hindbrain
Midbrain
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
Trunk Mesenchyme
Widespread Expression
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.20967

Mouse

EmageMGI:1858414
EurexpressMGI:1858414
MGI GXDMGI:1858414

Frog

Xenbase950833

Fruit Fly

BDGPFBgn0027593

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-130530-794
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