GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

NEUROG2
neurogenin 2

Gene
Official SymbolNEUROG2
Official Full Nameneurogenin 2
CGNC ID49383
also known asNGN2/ATH4A, neurogenin-2, neurogenin-2|atonal-like protein 4a
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204796
PolypeptideNP_990127
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.315
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human63973ENSG00000178403MIM:606624
Mouse11924ENSMUSG00000027967All phenotypic alleles (7):Targeted, knock-out(2) Targeted, other(5) MGI:109619
Xenopus100493110, 398061, 398062491039
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395577
Ensembl Gene
KEGGgga:395577

Entry 1

GEISHA IdNGN2.Dude.2009Data SourcePublication
Complete cDNA Template Probeshow
CCGGGCCGCTCCGACGCCGCCGGGGCGCGTGCCAGCGCCCCCCGACCGCCCGACGGCCGTCGACCAGCGGCCGCGCCCC
CCTCTCCCCCGCCCCCGCAGGATGCCGGTGAAGGCGGAGAGCCCGGCGCCCGCGGCGGAGGACGAACTGCTGCTGCTGC
GCCTCGCCTCGCCCGCCCCCTCGGCCTCGCTGCCGTCCAGCGCCGGCGAGGAGGACGAGGACGAGGAGGACGGGCGGCC
GAGGCGGCTGCAGGAGGGCGCTCGGCGGGCGGGGCGGCAGCGAGGGCCCCCGCGGGCGGCGCGCACGGCGGAAACGGCG
CAGCGCATCAAGCGGAGCCGGCGGCTGAAAGCCAACAACCGCGAGCGCAACCGCATGCACAACCTGAACGCGGCGCTGG
ACGCGCTGCGCGACTGCGTGCCCACCTTCCCCGAGGACGCCAAGCTCACCAAGATCGAGACGCTGCGCTTCGCCCACAA
CTACATCTGGGCGCTCACCGAGACGCTGCGCCTGGCCGGGGCCGCCCGCCTGGGGGGCGCCGCCGACGCCGCGCCCGGG
GCGGCCGCCGAGGGCAGCCCCTCGCCCGCCTCGTCGTGGAGCGGCGGCGCCAGCCCCGCGCCCTCCGCCTCGCCCTACG
CCTGCACTTTATCGCCCGGCAGCCCCGCCGGCTCCGCCTCGGACGCCGAGCACTGGCCGCCCCCGCGGGGCCGCTTCGC
CCCGCCGCCGCCGCCCCACCGCTGCCTCTAACGCGGCCCGGGCGGCCCTCGCTCCTCCGACGTGCACTTTGCCCGGCTC
TGCCCCTCGCCGCTCCGCAGCTGTCTCCGTGATTTACGAGCGGGGGAGCGGAGAAAAAAAAAAACAAGTTAAAAAAAAG
AAGAAGAAAAAGTTGTGTTGTTAGGGGTCCAGGTTAGAAGTCATTGTATAATTAGTAGGCTTTGTCAGGGCTGAATGCA
AGCGTGGAAATTTAGGCTGAACTCTCTTATCAAAAGGAAAAACTGTAGAGGGAAGGGAAGGGGTGGGTGGGAGGGAGGA
GCGCCTCATGCATATATTTATTTCGACCTTTAGGGGACAAGGAACTCCCCCCTTCTTTCAGGAGATTAAAAATAAATCA
ACGGACTGAAAACCCAAACAGACACGGGACATTACAGCGATCCGCCACACACGTGTTCACATTTATTTATTATAAAGAA
AGATTTCATGGAAAAGATGTATTTTTTGTATAATTTACAGAGTCTATTCTAGTATGTATTTACGGCTGAAGAGCAAAGG
GATTGTTTTCCTCATAAAGTATAAATAAAATATTTAATTTTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
CitationDude CM, Kuan CY, Bradshaw JR, Greene ND, Relaix F, Stark MR, Baker CV. Activation of Pax3 target genes is necessary but not sufficient for neurogenesis in the ophthalmic trigeminal placode. Dev Biol. 2009 Feb 15;326(2):314-26. Epub 2008 Dec 7.
CopyrightCopyright © 2009 Published by Elsevier Inc.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204796.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
stage 1
stage 1
stage 1
  
7-9
stage 8
stage 8
stage 9
stage 9
Ear/Otic Placode
 

Entry 2

GEISHA IdNGN2.Ma.2008Data SourcePublication
Complete cDNA Template Probeshow
CCGGGCCGCTCCGACGCCGCCGGGGCGCGTGCCAGCGCCCCCCGACCGCCCGACGGCCGTCGACCAGCGGCCGCGCCCC
CCTCTCCCCCGCCCCCGCAGGATGCCGGTGAAGGCGGAGAGCCCGGCGCCCGCGGCGGAGGACGAACTGCTGCTGCTGC
GCCTCGCCTCGCCCGCCCCCTCGGCCTCGCTGCCGTCCAGCGCCGGCGAGGAGGACGAGGACGAGGAGGACGGGCGGCC
GAGGCGGCTGCAGGAGGGCGCTCGGCGGGCGGGGCGGCAGCGAGGGCCCCCGCGGGCGGCGCGCACGGCGGAAACGGCG
CAGCGCATCAAGCGGAGCCGGCGGCTGAAAGCCAACAACCGCGAGCGCAACCGCATGCACAACCTGAACGCGGCGCTGG
ACGCGCTGCGCGACTGCGTGCCCACCTTCCCCGAGGACGCCAAGCTCACCAAGATCGAGACGCTGCGCTTCGCCCACAA
CTACATCTGGGCGCTCACCGAGACGCTGCGCCTGGCCGGGGCCGCCCGCCTGGGGGGCGCCGCCGACGCCGCGCCCGGG
GCGGCCGCCGAGGGCAGCCCCTCGCCCGCCTCGTCGTGGAGCGGCGGCGCCAGCCCCGCGCCCTCCGCCTCGCCCTACG
CCTGCACTTTATCGCCCGGCAGCCCCGCCGGCTCCGCCTCGGACGCCGAGCACTGGCCGCCCCCGCGGGGCCGCTTCGC
CCCGCCGCCGCCGCCCCACCGCTGCCTCTAACGCGGCCCGGGCGGCCCTCGCTCCTCCGACGTGCACTTTGCCCGGCTC
TGCCCCTCGCCGCTCCGCAGCTGTCTCCGTGATTTACGAGCGGGGGAGCGGAGAAAAAAAAAAACAAGTTAAAAAAAAG
AAGAAGAAAAAGTTGTGTTGTTAGGGGTCCAGGTTAGAAGTCATTGTATAATTAGTAGGCTTTGTCAGGGCTGAATGCA
AGCGTGGAAATTTAGGCTGAACTCTCTTATCAAAAGGAAAAACTGTAGAGGGAAGGGAAGGGGTGGGTGGGAGGGAGGA
GCGCCTCATGCATATATTTATTTCGACCTTTAGGGGACAAGGAACTCCCCCCTTCTTTCAGGAGATTAAAAATAAATCA
ACGGACTGAAAACCCAAACAGACACGGGACATTACAGCGATCCGCCACACACGTGTTCACATTTATTTATTATAAAGAA
AGATTTCATGGAAAAGATGTATTTTTTGTATAATTTACAGAGTCTATTCTAGTATGTATTTACGGCTGAAGAGCAAAGG
GATTGTTTTCCTCATAAAGTATAAATAAAATATTTAATTTTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
CitationMa W, Yan RT, Mao W, Wang SZ. Neurogenin3 promotes early retinal neurogenesis. Mol Cell Neurosci. 2009 Feb;40(2):187-98. Epub 2008 Nov 6.
CopyrightCopyright © 2008 Elsevier Inc. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204796 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 20
stage 20
stage 20
Forebrain
Retina
 
31-32
stage 32
stage 32
Retina
 

Entry 3

GEISHA IdNGN2.Frowein.2002Data SourcePublication
Complete cDNA Template Probeshow
CCGGGCCGCTCCGACGCCGCCGGGGCGCGTGCCAGCGCCCCCCGACCGCCCGACGGCCGTCGACCAGCGGCCGCGCCCC
CCTCTCCCCCGCCCCCGCAGGATGCCGGTGAAGGCGGAGAGCCCGGCGCCCGCGGCGGAGGACGAACTGCTGCTGCTGC
GCCTCGCCTCGCCCGCCCCCTCGGCCTCGCTGCCGTCCAGCGCCGGCGAGGAGGACGAGGACGAGGAGGACGGGCGGCC
GAGGCGGCTGCAGGAGGGCGCTCGGCGGGCGGGGCGGCAGCGAGGGCCCCCGCGGGCGGCGCGCACGGCGGAAACGGCG
CAGCGCATCAAGCGGAGCCGGCGGCTGAAAGCCAACAACCGCGAGCGCAACCGCATGCACAACCTGAACGCGGCGCTGG
ACGCGCTGCGCGACTGCGTGCCCACCTTCCCCGAGGACGCCAAGCTCACCAAGATCGAGACGCTGCGCTTCGCCCACAA
CTACATCTGGGCGCTCACCGAGACGCTGCGCCTGGCCGGGGCCGCCCGCCTGGGGGGCGCCGCCGACGCCGCGCCCGGG
GCGGCCGCCGAGGGCAGCCCCTCGCCCGCCTCGTCGTGGAGCGGCGGCGCCAGCCCCGCGCCCTCCGCCTCGCCCTACG
CCTGCACTTTATCGCCCGGCAGCCCCGCCGGCTCCGCCTCGGACGCCGAGCACTGGCCGCCCCCGCGGGGCCGCTTCGC
CCCGCCGCCGCCGCCCCACCGCTGCCTCTAACGCGGCCCGGGCGGCCCTCGCTCCTCCGACGTGCACTTTGCCCGGCTC
TGCCCCTCGCCGCTCCGCAGCTGTCTCCGTGATTTACGAGCGGGGGAGCGGAGAAAAAAAAAAACAAGTTAAAAAAAAG
AAGAAGAAAAAGTTGTGTTGTTAGGGGTCCAGGTTAGAAGTCATTGTATAATTAGTAGGCTTTGTCAGGGCTGAATGCA
AGCGTGGAAATTTAGGCTGAACTCTCTTATCAAAAGGAAAAACTGTAGAGGGAAGGGAAGGGGTGGGTGGGAGGGAGGA
GCGCCTCATGCATATATTTATTTCGACCTTTAGGGGACAAGGAACTCCCCCCTTCTTTCAGGAGATTAAAAATAAATCA
ACGGACTGAAAACCCAAACAGACACGGGACATTACAGCGATCCGCCACACACGTGTTCACATTTATTTATTATAAAGAA
AGATTTCATGGAAAAGATGTATTTTTTGTATAATTTACAGAGTCTATTCTAGTATGTATTTACGGCTGAAGAGCAAAGG
GATTGTTTTCCTCATAAAGTATAAATAAAATATTTAATTTTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
CitationFrowein J, Campbell K, Götz M. Expression of Ngn1, Ngn2, Cash1, Gsh2 and Sfrp1 in the developing chick telencephalon. Mech Dev. 2002 Jan;110(1-2):249-52.
CopyrightCopyright © 2002 Elsevier Science Ireland Ltd. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204796.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31
stage 31
stage 31
Telencephalon
 

Entry 4

GEISHA IdNgn2.Vieceli.2013Data SourcePublication
Complete cDNA Template Probeshow
ATGCCGGTGAAGGCGGAGAGCCCGGCGCCCGCGGCGGAGGACGAACTGCTGCTGCTGCGCCTCGCCTCGCCCGCCCCCT
CGGCCTCGCTGCCGTCCAGCGCCGGCGAGGAGGACGAGGACGAGGAGGACGGGCGGCCGAGGCGGCTGCAGGAGGGCGC
TCGGCGGGCGGGGCGGCAGCGAGGGCCCCCGCGGGCGGCGCGCACGGCGGAAACGGCGCAGCGCATCAAGCGGAGCCGG
CGGCTGAAAGCCAACAACCGCGAGCGCAACCGCATGCACAACCTGAACGCGGCGCTGGACGCGCTGCGCGACTGCGTGC
CCACCTTCCCCGAGGACGCCAAGCTCACCAAGATCGAGACGCTGCGCTTCGCCCACAACTACATCTGGGCGCTCACCGA
GACGCTGCGCCTGGCCGGGGCCGCCCGCCTGGGGGGCGCCGCCGACGCCGCGCCCGGGGCGGCCGCCGAGGGCAGCCCC
TCGCCCGCCTCGTCGTGGAGCGGCGGCGCCAGCCCCGCGCCCTCCGCCTCGCCCTACGCCTGCACTTTATCG
CitationVieceli FM, Simões-Costa M, Turri JA, Kanno T, Bronner M, Yan CY. The transcription factor chicken Scratch2 is expressed in a subset of early postmitotic neural progenitors. Gene Expr Patterns. 2013 Jun-Jul;13(5-6):189-96. DOI: 10.1016/j.gep.2013.03.004.
CopyrightCopyright © 2013 Elsevier B.V.
CommentsAuthors indicated the probe for Ngn2 was synthesized from 101–646 nucleotides of NCBI sequence NM_204796 and provided by E. Farley. Above sequence was extracted from NCBI (NM_204796.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25
stage 25
stage 25
Spinal Cord
Spinal Ganglia and Nerves
 
all
 
 
  

Entry 5

GEISHA IdNgn2.Joshi.2019Data SourcePublication
Complete cDNA Template Probeshow
CCGGGCCGCTCCGACGCCGCCGGGGCGCGTGCCAGCGCCCCCCGACCGCCCGACGGCCGTCGACCAGCGGCCGCGCCCC
CCTCTCCCCCGCCCCCGCAGGATGCCGGTGAAGGCGGAGAGCCCGGCGCCCGCGGCGGAGGACGAACTGCTGCTGCTGC
GCCTCGCCTCGCCCGCCCCCTCGGCCTCGCTGCCGTCCAGCGCCGGCGAGGAGGACGAGGACGAGGAGGACGGGCGGCC
GAGGCGGCTGCAGGAGGGCGCTCGGCGGGCGGGGCGGCAGCGAGGGCCCCCGCGGGCGGCGCGCACGGCGGAAACGGCG
CAGCGCATCAAGCGGAGCCGGCGGCTGAAAGCCAACAACCGCGAGCGCAACCGCATGCACAACCTGAACGCGGCGCTGG
ACGCGCTGCGCGACTGCGTGCCCACCTTCCCCGAGGACGCCAAGCTCACCAAGATCGAGACGCTGCGCTTCGCCCACAA
CTACATCTGGGCGCTCACCGAGACGCTGCGCCTGGCCGGGGCCGCCCGCCTGGGGGGCGCCGCCGACGCCGCGCCCGGG
GCGGCCGCCGAGGGCAGCCCCTCGCCCGCCTCGTCGTGGAGCGGCGGCGCCAGCCCCGCGCCCTCCGCCTCGCCCTACG
CCTGCACTTTATCGCCCGGCAGCCCCGCCGGCTCCGCCTCGGACGCCGAGCACTGGCCGCCCCCGCGGGGCCGCTTCGC
CCCGCCGCCGCCGCCCCACCGCTGCCTCTAACGCGGCCCGGGCGGCCCTCGCTCCTCCGACGTGCACTTTGCCCGGCTC
TGCCCCTCGCCGCTCCGCAGCTGTCTCCGTGATTTACGAGCGGGGGAGCGGAGAAAAAAAAAAACAAGTTAAAAAAAAG
AAGAAGAAAAAGTTGTGTTGTTAGGGGTCCAGGTTAGAAGTCATTGTATAATTAGTAGGCTTTGTCAGGGCTGAATGCA
AGCGTGGAAATTTAGGCTGAACTCTCTTATCAAAAGGAAAAACTGTAGAGGGAAGGGAAGGGGTGGGTGGGAGGGAGGA
GCGCCTCATGCATATATTTATTTCGACCTTTAGGGGACAAGGAACTCCCCCCTTCTTTCAGGAGATTAAAAATAAATCA
ACGGACTGAAAACCCAAACAGACACGGGACATTACAGCGATCCGCCACACACGTGTTCACATTTATTTATTATAAAGAA
AGATTTCATGGAAAAGATGTATTTTTTGTATAATTTACAGAGTCTATTCTAGTATGTATTTACGGCTGAAGAGCAAAGG
GATTGTTTTCCTCATAAAGTATAAATAAAATATTTAATTTTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
CitationPiyush Joshi, Andrew J Darr, Isaac Skromne. CDX4 regulates the progression of neural maturation in the spinal cord. Dev Biol. 2019 May 15;449(2):132-142. Epub 2019 Feb 28. DOI: 10.1016/j.ydbio.2019.02.014.
CopyrightCopyright © 2019 Elsevier Inc.
CommentsAuthors indicated the probe was made from Ngn2 gene construct provided by Dr. Francois Medevielle. As insufficient information is provided in publication to verify exact sequence used to synthesize probe, above sequence was obtained from NCBI (NM_204796.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 11
stage 11
Neural Plate/Tube
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.315

Mouse

EmageMGI:109619
EurexpressMGI:109619
MGI GXDMGI:109619

Frog

Xenbase491039

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona